RNA–Protein interactions for RNA: ENST00000612672.1

MMP28-203, Transcript of matrix metallopeptidase 28, humanhuman

TSL 1 (best) BASIC

Gene MMP28, Length 1,092 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MMP28-203ENST00000612672 GDAQ9Y2T3 454 aa25.88■■□□□ 1.73
MMP28-203ENST00000612672 CHD8Q9HCK8 2581 aa25.88■■□□□ 1.73
MMP28-203ENST00000612672 N4BP3O15049 544 aa25.87■■□□□ 1.73
MMP28-203ENST00000612672 LILRB5O75023 590 aa25.87■■□□□ 1.73
MMP28-203ENST00000612672 LARGE1O95461 756 aa25.87■■□□□ 1.73
MMP28-203ENST00000612672 PRKCBP05771 671 aa25.87■■□□□ 1.73
MMP28-203ENST00000612672 CNTNAP3BQ96NU0 1288 aa25.87■■□□□ 1.73
MMP28-203ENST00000612672 KIFC3Q9BVG8 833 aa25.87■■□□□ 1.73
MMP28-203ENST00000612672 CNTNAP3Q9BZ76 1288 aa25.87■■□□□ 1.73
MMP28-203ENST00000612672 POLD4Q9HCU8 107 aa25.87■■□□□ 1.73
MMP28-203ENST00000612672 HEBP1Q9NRV9 189 aa25.87■■□□□ 1.73
MMP28-203ENST00000612672 NCDNQ9UBB6 729 aa25.87■■□□□ 1.73
MMP28-203ENST00000612672 SMG5Q9UPR3 1016 aaKnown RBP25.87■■□□□ 1.73
MMP28-203ENST00000612672 PCDHGA2Q9Y5H1 932 aa25.87■■□□□ 1.73
MMP28-203ENST00000612672 BTBD18B2RXH4 712 aa25.86■■□□□ 1.73
MMP28-203ENST00000612672 EPB41L2O43491 1005 aaKnown RBP25.86■■□□□ 1.73
MMP28-203ENST00000612672 NEMFO60524 1076 aa25.86■■□□□ 1.73
MMP28-203ENST00000612672 TGM1P22735 817 aa25.86■■□□□ 1.73
MMP28-203ENST00000612672 FCARP24071 287 aa25.86■■□□□ 1.73
MMP28-203ENST00000612672 CLCNKBP51801 687 aa25.86■■□□□ 1.73
MMP28-203ENST00000612672 FOSBP53539 338 aa25.86■■□□□ 1.73
MMP28-203ENST00000612672 PRPF4BQ13523 1007 aaKnown RBP25.86■■□□□ 1.73
MMP28-203ENST00000612672 TANGO2Q6ICL3 276 aa25.86■■□□□ 1.73
MMP28-203ENST00000612672 CATSPER3Q86XQ3 398 aa25.86■■□□□ 1.73
MMP28-203ENST00000612672 ZNF687Q8N1G0 1237 aa25.86■■□□□ 1.73
MMP28-203ENST00000612672 PPP1R10Q96QC0 940 aaKnown RBP25.86■■□□□ 1.73
MMP28-203ENST00000612672 PRMT8Q9NR22 394 aaPredicted RBP25.86■■□□□ 1.73
MMP28-203ENST00000612672 KCNH3Q9ULD8 1083 aa25.86■■□□□ 1.73
MMP28-203ENST00000612672 MAP1BP46821 2468 aaKnown RBP25.86■■□□□ 1.73
MMP28-203ENST00000612672 TMEM189-UBE2V1I3L0A0 370 aa25.85■■□□□ 1.73
MMP28-203ENST00000612672 RHOP08100 348 aa25.85■■□□□ 1.73
MMP28-203ENST00000612672 LIG1P18858 919 aa25.85■■□□□ 1.73
MMP28-203ENST00000612672 BRCC3P46736 316 aa25.85■■□□□ 1.73
MMP28-203ENST00000612672 PFKPQ01813 784 aa25.85■■□□□ 1.73
MMP28-203ENST00000612672 ELAVL2Q12926 359 aaKnown RBP25.85■■□□□ 1.73
MMP28-203ENST00000612672 ZBTB8OSQ8IWT0 167 aa25.85■■□□□ 1.73
MMP28-203ENST00000612672 NECAB1Q8N987 351 aa25.85■■□□□ 1.73
MMP28-203ENST00000612672 EPC1Q9H2F5 836 aa25.85■■□□□ 1.73
MMP28-203ENST00000612672 MRPS23Q9Y3D9 190 aaKnown RBP25.85■■□□□ 1.73
MMP28-203ENST00000612672 ECI2O75521 394 aa25.84■■□□□ 1.73
MMP28-203ENST00000612672 KRT37O76014 449 aa25.84■■□□□ 1.73
MMP28-203ENST00000612672 XRCC6P12956 609 aaKnown RBP eCLIP25.84■■□□□ 1.73
MMP28-203ENST00000612672 TDGF1P13385 188 aa25.84■■□□□ 1.73
MMP28-203ENST00000612672 ATP2B1P20020 1258 aa25.84■■□□□ 1.73
MMP28-203ENST00000612672 ATXN1P54253 815 aaKnown RBP25.84■■□□□ 1.73
MMP28-203ENST00000612672 SOX4Q06945 474 aaPredicted RBP25.84■■□□□ 1.73
MMP28-203ENST00000612672 UVSSAQ2YD98 709 aa25.84■■□□□ 1.73
MMP28-203ENST00000612672 ZBTB41Q5SVQ8 909 aa25.84■■□□□ 1.73
MMP28-203ENST00000612672 MCPH1Q8NEM0 835 aa25.84■■□□□ 1.73
MMP28-203ENST00000612672 TCEAL4Q96EI5 215 aa25.84■■□□□ 1.73
MMP28-203ENST00000612672 PARD6AQ9NPB6 346 aa25.84■■□□□ 1.73
MMP28-203ENST00000612672 ZSCAN32Q9NX65 697 aa25.84■■□□□ 1.73
MMP28-203ENST00000612672 PDCD11Q14690 1871 aaKnown RBP25.83■■□□□ 1.73
MMP28-203ENST00000612672 ACKR2O00590 384 aa25.83■■□□□ 1.73
MMP28-203ENST00000612672 MTAPQ13126 283 aa25.83■■□□□ 1.73
MMP28-203ENST00000612672 PRSS36Q5K4E3 855 aa25.83■■□□□ 1.73
MMP28-203ENST00000612672 NT5DC1Q5TFE4 455 aa25.83■■□□□ 1.73
MMP28-203ENST00000612672 PDXDC1Q6P996 788 aa25.83■■□□□ 1.73
MMP28-203ENST00000612672 CEP120Q8N960 986 aa25.83■■□□□ 1.73
MMP28-203ENST00000612672 NCANO14594 1321 aa25.83■■□□□ 1.73
MMP28-203ENST00000612672 CFAP47Q6ZTR5 3102 aa25.82■■□□□ 1.72
MMP28-203ENST00000612672 B3GAT3O94766 335 aa25.82■■□□□ 1.72
MMP28-203ENST00000612672 CCR2P41597 374 aa25.82■■□□□ 1.72
MMP28-203ENST00000612672 ROR1Q01973 937 aa25.82■■□□□ 1.72
MMP28-203ENST00000612672 GRM2Q14416 872 aa25.82■■□□□ 1.72
MMP28-203ENST00000612672 MAPK6Q16659 721 aa25.82■■□□□ 1.72
MMP28-203ENST00000612672 UPP1Q16831 310 aa25.82■■□□□ 1.72
MMP28-203ENST00000612672 TMEM132AQ24JP5 1023 aa25.82■■□□□ 1.72
MMP28-203ENST00000612672 DIS3L2Q8IYB7 885 aaKnown RBP25.82■■□□□ 1.72
MMP28-203ENST00000612672 ATRIPQ8WXE1 791 aa25.82■■□□□ 1.72
MMP28-203ENST00000612672 C2orf40Q9H1Z8 148 aa25.82■■□□□ 1.72
MMP28-203ENST00000612672 BACE2Q9Y5Z0 518 aa25.82■■□□□ 1.72
MMP28-203ENST00000612672 CITO14578 2027 aa25.81■■□□□ 1.72
MMP28-203ENST00000612672 WDR27A2RRH5 827 aa25.81■■□□□ 1.72
MMP28-203ENST00000612672 JAK2O60674 1132 aa25.81■■□□□ 1.72
MMP28-203ENST00000612672 MAGEA9P43362 315 aa25.81■■□□□ 1.72
MMP28-203ENST00000612672 RPS9P46781 194 aaKnown RBP25.81■■□□□ 1.72
MMP28-203ENST00000612672 RBM25P49756 843 aaKnown RBP25.81■■□□□ 1.72
MMP28-203ENST00000612672 PADI6Q6TGC4 694 aa25.81■■□□□ 1.72
MMP28-203ENST00000612672 TUFT1Q9NNX1 390 aa25.81■■□□□ 1.72
MMP28-203ENST00000612672 ARHGEF37A1IGU5 675 aa25.8■■□□□ 1.72
MMP28-203ENST00000612672 ME3Q16798 604 aa25.8■■□□□ 1.72
MMP28-203ENST00000612672 NSUN7Q8NE18 718 aaKnown RBP25.8■■□□□ 1.72
MMP28-203ENST00000612672 ELSPBP1Q96BH3 223 aa25.8■■□□□ 1.72
MMP28-203ENST00000612672 ADPGKQ9BRR6 497 aa25.8■■□□□ 1.72
MMP28-203ENST00000612672 AVENQ9NQS1 362 aaPredicted RBP25.8■■□□□ 1.72
MMP28-203ENST00000612672 GDE1Q9NZC3 331 aa25.8■■□□□ 1.72
MMP28-203ENST00000612672 USP24Q9UPU5 2620 aa25.8■■□□□ 1.72
MMP28-203ENST00000612672 SEC24AO95486 1093 aa25.79■■□□□ 1.72
MMP28-203ENST00000612672 CYP11B2P19099 503 aa25.79■■□□□ 1.72
MMP28-203ENST00000612672 NAMPTP43490 491 aa25.79■■□□□ 1.72
MMP28-203ENST00000612672 ECM1Q16610 540 aa25.79■■□□□ 1.72
MMP28-203ENST00000612672 DCAF4L1Q3SXM0 396 aa25.79■■□□□ 1.72
MMP28-203ENST00000612672 WASF1Q92558 559 aa25.79■■□□□ 1.72
MMP28-203ENST00000612672 BRMS1Q9HCU9 246 aa25.79■■□□□ 1.72
MMP28-203ENST00000612672 NDRG2Q9UN36 371 aaKnown RBP25.79■■□□□ 1.72
MMP28-203ENST00000612672 MEFVO15553 781 aaPredicted RBP25.78■■□□□ 1.72
MMP28-203ENST00000612672 TBC1D4O60343 1298 aa25.78■■□□□ 1.72
MMP28-203ENST00000612672 ABLIM3O94929 683 aa25.78■■□□□ 1.72
MMP28-203ENST00000612672 ADCY1Q08828 1119 aa25.78■■□□□ 1.72
Retrieved 100 of 20,778 RNA–protein pairs in 26.5 ms