RNA–Protein interactions for RNA: ENST00000611976.1

CDC42EP3-206, Transcript of CDC42 effector protein 3, humanhuman

APPRIS P1 TSL 3 BASIC

Gene CDC42EP3, Length 5,124 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42EP3-206ENST00000611976 PPP6R3Q5H9R7 873 aaPredicted RBP11.54□□□□□ -0.56
CDC42EP3-206ENST00000611976 CPA5Q8WXQ8 436 aa11.54□□□□□ -0.56
CDC42EP3-206ENST00000611976 HDAC11Q96DB2 347 aa11.54□□□□□ -0.56
CDC42EP3-206ENST00000611976 MRPL4Q9BYD3 311 aaKnown RBP11.54□□□□□ -0.56
CDC42EP3-206ENST00000611976 AFG3L2Q9Y4W6 797 aa11.54□□□□□ -0.56
CDC42EP3-206ENST00000611976 CAND2O75155 1236 aa11.54□□□□□ -0.56
CDC42EP3-206ENST00000611976 MMP10P09238 476 aa11.54□□□□□ -0.56
CDC42EP3-206ENST00000611976 PGM1P36871 562 aa11.54□□□□□ -0.56
CDC42EP3-206ENST00000611976 NOP14P78316 857 aaKnown RBP11.54□□□□□ -0.56
CDC42EP3-206ENST00000611976 PIGHQ14442 188 aaPredicted RBP11.54□□□□□ -0.56
CDC42EP3-206ENST00000611976 JADE1Q6IE81 842 aa11.54□□□□□ -0.56
CDC42EP3-206ENST00000611976 KRT80Q6KB66 452 aa11.54□□□□□ -0.56
CDC42EP3-206ENST00000611976 C7orf31Q8N865 590 aa11.54□□□□□ -0.56
CDC42EP3-206ENST00000611976 C18orf8Q96DM3 657 aa11.54□□□□□ -0.56
CDC42EP3-206ENST00000611976 CCDC68Q9H2F9 335 aa11.54□□□□□ -0.56
CDC42EP3-206ENST00000611976 PCSK1NQ9UHG2 260 aa11.54□□□□□ -0.56
CDC42EP3-206ENST00000611976 CNOT7Q9UIV1 285 aaKnown RBP11.54□□□□□ -0.56
CDC42EP3-206ENST00000611976 SIK3Q9Y2K2 1263 aa11.54□□□□□ -0.56
CDC42EP3-206ENST00000611976 HEY1Q9Y5J3 304 aa11.54□□□□□ -0.56
CDC42EP3-206ENST00000611976 PPFIA2O75334 1257 aa11.54□□□□□ -0.56
CDC42EP3-206ENST00000611976 ENTPD3O75355 529 aa11.54□□□□□ -0.56
CDC42EP3-206ENST00000611976 NQO1P15559 274 aaKnown RBP11.54□□□□□ -0.56
CDC42EP3-206ENST00000611976 COPB2P35606 906 aa11.54□□□□□ -0.56
CDC42EP3-206ENST00000611976 KCNJ1P48048 391 aa11.54□□□□□ -0.56
CDC42EP3-206ENST00000611976 THOC5Q13769 683 aaKnown RBP11.54□□□□□ -0.56
CDC42EP3-206ENST00000611976 PRR5LQ6MZQ0 368 aa11.54□□□□□ -0.56
CDC42EP3-206ENST00000611976 FOXR1Q6PIV2 292 aa11.54□□□□□ -0.56
CDC42EP3-206ENST00000611976 SLC5A4Q9NY91 659 aa11.54□□□□□ -0.56
CDC42EP3-206ENST00000611976 ATMINO43313 823 aaPredicted RBP11.54□□□□□ -0.56
CDC42EP3-206ENST00000611976 SPAG6O75602 509 aa11.54□□□□□ -0.56
CDC42EP3-206ENST00000611976 GZMAP12544 262 aa11.54□□□□□ -0.56
CDC42EP3-206ENST00000611976 MARK3P27448 753 aa11.54□□□□□ -0.56
CDC42EP3-206ENST00000611976 SDC4P31431 198 aa11.54□□□□□ -0.56
CDC42EP3-206ENST00000611976 AMPD2Q01433 879 aa11.54□□□□□ -0.56
CDC42EP3-206ENST00000611976 C11orf63Q6NUN7 778 aa11.54□□□□□ -0.56
CDC42EP3-206ENST00000611976 PAXIP1Q6ZW49 1069 aaPredicted RBP11.54□□□□□ -0.56
CDC42EP3-206ENST00000611976 PACS2Q86VP3 889 aa11.54□□□□□ -0.56
CDC42EP3-206ENST00000611976 ANKMY2Q8IV38 441 aa11.54□□□□□ -0.56
CDC42EP3-206ENST00000611976 CD302Q8IX05 232 aa11.54□□□□□ -0.56
CDC42EP3-206ENST00000611976 EPS8L3Q8TE67 593 aaKnown RBP11.54□□□□□ -0.56
CDC42EP3-206ENST00000611976 NLRP4Q96MN2 994 aa11.54□□□□□ -0.56
CDC42EP3-206ENST00000611976 PNMA5Q96PV4 448 aa11.54□□□□□ -0.56
CDC42EP3-206ENST00000611976 LRRC4Q9HBW1 653 aa11.54□□□□□ -0.56
CDC42EP3-206ENST00000611976 NPHS2Q9NP85 383 aa11.54□□□□□ -0.56
CDC42EP3-206ENST00000611976 BCS1LQ9Y276 419 aa11.54□□□□□ -0.56
CDC42EP3-206ENST00000611976 SPATA31A1Q5TZJ5 1347 aa11.53□□□□□ -0.56
CDC42EP3-206ENST00000611976 M0QYV0 167 aa11.53□□□□□ -0.56
CDC42EP3-206ENST00000611976 KITP10721 976 aa11.53□□□□□ -0.56
CDC42EP3-206ENST00000611976 BCAR1P56945 870 aa11.53□□□□□ -0.56
CDC42EP3-206ENST00000611976 KLC1Q07866 573 aa11.53□□□□□ -0.56
CDC42EP3-206ENST00000611976 ITKQ08881 620 aa11.53□□□□□ -0.56
CDC42EP3-206ENST00000611976 NBPF20Q3BBV1 942 aa11.53□□□□□ -0.56
CDC42EP3-206ENST00000611976 ZNF568Q3ZCX4 644 aa11.53□□□□□ -0.56
CDC42EP3-206ENST00000611976 Q4G0T1 1027 aa11.53□□□□□ -0.56
CDC42EP3-206ENST00000611976 DNAL1Q4LDG9 190 aa11.53□□□□□ -0.56
CDC42EP3-206ENST00000611976 RGS9BPQ6ZS82 235 aa11.53□□□□□ -0.56
CDC42EP3-206ENST00000611976 STAMBPL1Q96FJ0 436 aa11.53□□□□□ -0.56
CDC42EP3-206ENST00000611976 UBN1Q9NPG3 1134 aa11.53□□□□□ -0.56
CDC42EP3-206ENST00000611976 MRPL40Q9NQ50 206 aaKnown RBP11.53□□□□□ -0.56
CDC42EP3-206ENST00000611976 GEMIN8Q9NWZ8 242 aaKnown RBP11.53□□□□□ -0.56
CDC42EP3-206ENST00000611976 WDR35Q9P2L0 1181 aa11.53□□□□□ -0.56
CDC42EP3-206ENST00000611976 DDX20Q9UHI6 824 aaKnown RBP11.53□□□□□ -0.56
CDC42EP3-206ENST00000611976 TRAF3IP3Q9Y228 551 aa11.53□□□□□ -0.56
CDC42EP3-206ENST00000611976 A0A0U1RQJ8 604 aa11.53□□□□□ -0.56
CDC42EP3-206ENST00000611976 CCDC195A0A1B0GUA6 201 aa11.53□□□□□ -0.56
CDC42EP3-206ENST00000611976 CFLARO15519 480 aa11.53□□□□□ -0.56
CDC42EP3-206ENST00000611976 TRPA1O75762 1119 aa11.53□□□□□ -0.56
CDC42EP3-206ENST00000611976 FSBPO95073 299 aa11.53□□□□□ -0.56
CDC42EP3-206ENST00000611976 EIF3EP60228 445 aaKnown RBP11.53□□□□□ -0.56
CDC42EP3-206ENST00000611976 ACAD10Q6JQN1 1059 aa11.53□□□□□ -0.56
CDC42EP3-206ENST00000611976 ACAD11Q709F0 780 aa11.53□□□□□ -0.56
CDC42EP3-206ENST00000611976 C4orf33Q8N1A6 199 aa11.53□□□□□ -0.56
CDC42EP3-206ENST00000611976 SIX6OS1Q8N1H7 587 aa11.53□□□□□ -0.56
CDC42EP3-206ENST00000611976 MAGEB18Q96M61 343 aa11.53□□□□□ -0.56
CDC42EP3-206ENST00000611976 SH3GL3Q99963 347 aa11.53□□□□□ -0.56
CDC42EP3-206ENST00000611976 MTO1Q9Y2Z2 717 aaKnown RBP11.53□□□□□ -0.56
CDC42EP3-206ENST00000611976 PCDHGC5Q9Y5F6 944 aa11.53□□□□□ -0.56
CDC42EP3-206ENST00000611976 ARHGAP23Q9P227 1491 aa11.53□□□□□ -0.56
CDC42EP3-206ENST00000611976 DCAF8L1A6NGE4 600 aa11.53□□□□□ -0.56
CDC42EP3-206ENST00000611976 PSTPIP1O43586 416 aa11.53□□□□□ -0.56
CDC42EP3-206ENST00000611976 DUOXA2Q1HG44 320 aa11.53□□□□□ -0.56
CDC42EP3-206ENST00000611976 STRIP1Q5VSL9 837 aa11.53□□□□□ -0.56
CDC42EP3-206ENST00000611976 ARMCX2Q7L311 632 aa11.53□□□□□ -0.56
CDC42EP3-206ENST00000611976 TMC3Q7Z5M5 1100 aa11.53□□□□□ -0.56
CDC42EP3-206ENST00000611976 PSPC1Q8WXF1 523 aaKnown RBP11.53□□□□□ -0.56
CDC42EP3-206ENST00000611976 MXRA8Q9BRK3 442 aa11.53□□□□□ -0.56
CDC42EP3-206ENST00000611976 TRIM56Q9BRZ2 755 aaKnown RBP11.53□□□□□ -0.56
CDC42EP3-206ENST00000611976 UPF3AQ9H1J1 476 aaKnown RBP11.53□□□□□ -0.56
CDC42EP3-206ENST00000611976 SMYD3Q9H7B4 428 aa11.53□□□□□ -0.56
CDC42EP3-206ENST00000611976 IL17RBQ9NRM6 502 aa11.53□□□□□ -0.56
CDC42EP3-206ENST00000611976 FBXO40Q9UH90 709 aa11.53□□□□□ -0.56
CDC42EP3-206ENST00000611976 FOXN3O00409 490 aaPredicted RBP11.53□□□□□ -0.56
CDC42EP3-206ENST00000611976 OSBPP22059 807 aa11.53□□□□□ -0.56
CDC42EP3-206ENST00000611976 SREBF1P36956 1147 aa11.53□□□□□ -0.56
CDC42EP3-206ENST00000611976 ERVK-9P63128 1117 aa11.53□□□□□ -0.56
CDC42EP3-206ENST00000611976 ZNF844Q08AG5 666 aa11.53□□□□□ -0.56
CDC42EP3-206ENST00000611976 SNRNP48Q6IEG0 339 aaKnown RBP11.53□□□□□ -0.56
CDC42EP3-206ENST00000611976 WDR59Q6PJI9 974 aa11.53□□□□□ -0.56
CDC42EP3-206ENST00000611976 YTHDF3Q7Z739 585 aaKnown RBP11.53□□□□□ -0.56
CDC42EP3-206ENST00000611976 KIF2BQ8N4N8 673 aa11.53□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 19.5 ms