RNA–Protein interactions for RNA: ENST00000602898.1

SPTBN1-206, Transcript of spectrin beta, non-erythrocytic 1, humanhuman

TSL 1 (best)

Gene SPTBN1, Length 2,942 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTBN1-206ENST00000602898 THOC7Q6I9Y2 204 aaKnown RBP5.39□□□□□ -1.55
SPTBN1-206ENST00000602898 XKR5Q6UX68 686 aa5.39□□□□□ -1.55
SPTBN1-206ENST00000602898 GK5Q6ZS86 529 aa5.39□□□□□ -1.55
SPTBN1-206ENST00000602898 FCHSD1Q86WN1 690 aa5.39□□□□□ -1.55
SPTBN1-206ENST00000602898 SYCP3Q8IZU3 236 aa5.39□□□□□ -1.55
SPTBN1-206ENST00000602898 SPERTQ8NA61 448 aa5.39□□□□□ -1.55
SPTBN1-206ENST00000602898 ATG16L2Q8NAA4 619 aa5.39□□□□□ -1.55
SPTBN1-206ENST00000602898 BBOF1Q8ND07 529 aa5.39□□□□□ -1.55
SPTBN1-206ENST00000602898 ZNF280CQ8ND82 737 aa5.39□□□□□ -1.55
SPTBN1-206ENST00000602898 CEP70Q8NHQ1 597 aa5.39□□□□□ -1.55
SPTBN1-206ENST00000602898 RASSF8Q8NHQ8 419 aa5.39□□□□□ -1.55
SPTBN1-206ENST00000602898 SLC30A5Q8TAD4 765 aa5.39□□□□□ -1.55
SPTBN1-206ENST00000602898 NANOS1Q8WY41 292 aaKnown RBP5.39□□□□□ -1.55
SPTBN1-206ENST00000602898 PPP2R3CQ969Q6 453 aa5.39□□□□□ -1.55
SPTBN1-206ENST00000602898 AIDAQ96BJ3 306 aa5.39□□□□□ -1.55
SPTBN1-206ENST00000602898 AK8Q96MA6 479 aa5.39□□□□□ -1.55
SPTBN1-206ENST00000602898 RUSC1Q9BVN2 902 aa5.39□□□□□ -1.55
SPTBN1-206ENST00000602898 GGNBP2Q9H3C7 697 aa5.39□□□□□ -1.55
SPTBN1-206ENST00000602898 VPS18Q9P253 973 aa5.39□□□□□ -1.55
SPTBN1-206ENST00000602898 EPS15L1Q9UBC2 864 aa5.39□□□□□ -1.55
SPTBN1-206ENST00000602898 FAM8A1Q9UBU6 413 aa5.39□□□□□ -1.55
SPTBN1-206ENST00000602898 NSFL1CQ9UNZ2 370 aaKnown RBP5.39□□□□□ -1.55
SPTBN1-206ENST00000602898 PCDHGA9Q9Y5G4 932 aaKnown RBP5.39□□□□□ -1.55
SPTBN1-206ENST00000602898 PCDHGA8Q9Y5G5 932 aa5.39□□□□□ -1.55
SPTBN1-206ENST00000602898 PCDHGA7Q9Y5G6 932 aa5.39□□□□□ -1.55
SPTBN1-206ENST00000602898 PCDHGA6Q9Y5G7 932 aa5.39□□□□□ -1.55
SPTBN1-206ENST00000602898 PCDHGA3Q9Y5H0 932 aa5.39□□□□□ -1.55
SPTBN1-206ENST00000602898 PCDHGA2Q9Y5H1 932 aa5.39□□□□□ -1.55
SPTBN1-206ENST00000602898 TNPO3Q9Y5L0 923 aaKnown RBP5.39□□□□□ -1.55
SPTBN1-206ENST00000602898 ZFP37Q9Y6Q3 630 aaPredicted RBP5.39□□□□□ -1.55
SPTBN1-206ENST00000602898 CAPN7Q9Y6W3 813 aa5.39□□□□□ -1.55
SPTBN1-206ENST00000602898 RGSL1A5PLK6 1076 aa5.38□□□□□ -1.55
SPTBN1-206ENST00000602898 H3BQF6 201 aa5.38□□□□□ -1.55
SPTBN1-206ENST00000602898 MAP2K7O14733 419 aa5.38□□□□□ -1.55
SPTBN1-206ENST00000602898 NPPAP01160 153 aa5.38□□□□□ -1.55
SPTBN1-206ENST00000602898 PF4P02776 101 aa5.38□□□□□ -1.55
SPTBN1-206ENST00000602898 SOD2P04179 222 aa5.38□□□□□ -1.55
SPTBN1-206ENST00000602898 INHAP05111 366 aa5.38□□□□□ -1.55
SPTBN1-206ENST00000602898 DHRS4L1P0CG22 281 aa5.38□□□□□ -1.55
SPTBN1-206ENST00000602898 BCRP11274 1271 aa5.38□□□□□ -1.55
SPTBN1-206ENST00000602898 C6P13671 934 aa5.38□□□□□ -1.55
SPTBN1-206ENST00000602898 GDI1P31150 447 aa5.38□□□□□ -1.55
SPTBN1-206ENST00000602898 TCF7P36402 384 aaPredicted RBP5.38□□□□□ -1.55
SPTBN1-206ENST00000602898 DIO1P49895 249 aa5.38□□□□□ -1.55
SPTBN1-206ENST00000602898 SCAND1P57086 179 aa5.38□□□□□ -1.55
SPTBN1-206ENST00000602898 KRTCAP3Q53RY4 240 aa5.38□□□□□ -1.55
SPTBN1-206ENST00000602898 NAA16Q6N069 864 aaPredicted RBP5.38□□□□□ -1.55
SPTBN1-206ENST00000602898 PGM2L1Q6PCE3 622 aa5.38□□□□□ -1.55
SPTBN1-206ENST00000602898 BICDL1Q6ZP65 573 aa5.38□□□□□ -1.55
SPTBN1-206ENST00000602898 NANOGNBQ7Z5D8 188 aa5.38□□□□□ -1.55
SPTBN1-206ENST00000602898 SLC9A9Q8IVB4 645 aa5.38□□□□□ -1.55
SPTBN1-206ENST00000602898 TRIML2Q8N7C3 387 aa5.38□□□□□ -1.55
SPTBN1-206ENST00000602898 GALNT6Q8NCL4 622 aa5.38□□□□□ -1.55
SPTBN1-206ENST00000602898 COG3Q96JB2 828 aa5.38□□□□□ -1.55
SPTBN1-206ENST00000602898 MAML3Q96JK9 1138 aa5.38□□□□□ -1.55
SPTBN1-206ENST00000602898 TRIM47Q96LD4 638 aa5.38□□□□□ -1.55
SPTBN1-206ENST00000602898 TTC25Q96NG3 672 aa5.38□□□□□ -1.55
SPTBN1-206ENST00000602898 TSC22D3Q99576 134 aa5.38□□□□□ -1.55
SPTBN1-206ENST00000602898 B3GNT4Q9C0J1 378 aa5.38□□□□□ -1.55
SPTBN1-206ENST00000602898 GHITMQ9H3K2 345 aa5.38□□□□□ -1.55
SPTBN1-206ENST00000602898 KRT84Q9NSB2 600 aa5.38□□□□□ -1.55
SPTBN1-206ENST00000602898 PRELID1Q9Y255 219 aa5.38□□□□□ -1.55
SPTBN1-206ENST00000602898 RTCBQ9Y3I0 505 aaKnown RBP5.38□□□□□ -1.55
SPTBN1-206ENST00000602898 LTBP3Q9NS15 1303 aa5.38□□□□□ -1.55
SPTBN1-206ENST00000602898 TMEM2Q9UHN6 1383 aa5.38□□□□□ -1.55
SPTBN1-206ENST00000602898 BAG2O95816 211 aa5.38□□□□□ -1.55
SPTBN1-206ENST00000602898 IFNB1P01574 187 aa5.38□□□□□ -1.55
SPTBN1-206ENST00000602898 PTGS1P23219 599 aa5.38□□□□□ -1.55
SPTBN1-206ENST00000602898 GIPRP48546 466 aa5.38□□□□□ -1.55
SPTBN1-206ENST00000602898 AMPHP49418 695 aa5.38□□□□□ -1.55
SPTBN1-206ENST00000602898 PPP5CP53041 499 aa5.38□□□□□ -1.55
SPTBN1-206ENST00000602898 TNFAIP2Q03169 654 aa5.38□□□□□ -1.55
SPTBN1-206ENST00000602898 PKP1Q13835 747 aa5.38□□□□□ -1.55
SPTBN1-206ENST00000602898 CLUL1Q15846 466 aa5.38□□□□□ -1.55
SPTBN1-206ENST00000602898 SNCBQ16143 134 aa5.38□□□□□ -1.55
SPTBN1-206ENST00000602898 METTL11BQ5VVY1 283 aa5.38□□□□□ -1.55
SPTBN1-206ENST00000602898 GPR139Q6DWJ6 353 aa5.38□□□□□ -1.55
SPTBN1-206ENST00000602898 CHST15Q7LFX5 561 aaPredicted RBP5.38□□□□□ -1.55
SPTBN1-206ENST00000602898 CHD1LQ86WJ1 897 aa5.38□□□□□ -1.55
SPTBN1-206ENST00000602898 LSRQ86X29 649 aaPredicted RBP5.38□□□□□ -1.55
SPTBN1-206ENST00000602898 OR8H3Q8N146 312 aa5.38□□□□□ -1.55
SPTBN1-206ENST00000602898 LRRC47Q8N1G4 583 aaKnown RBP5.38□□□□□ -1.55
SPTBN1-206ENST00000602898 RFWD2Q8NHY2 731 aa5.38□□□□□ -1.55
SPTBN1-206ENST00000602898 FAM71BQ8TC56 605 aa5.38□□□□□ -1.55
SPTBN1-206ENST00000602898 COL26A1Q96A83 441 aa5.38□□□□□ -1.55
SPTBN1-206ENST00000602898 CCDC74AQ96AQ1 378 aa5.38□□□□□ -1.55
SPTBN1-206ENST00000602898 C18orf8Q96DM3 657 aa5.38□□□□□ -1.55
SPTBN1-206ENST00000602898 EPSTI1Q96J88 318 aa5.38□□□□□ -1.55
SPTBN1-206ENST00000602898 PI4K2AQ9BTU6 479 aa5.38□□□□□ -1.55
SPTBN1-206ENST00000602898 OXCT2Q9BYC2 517 aaPredicted RBP5.38□□□□□ -1.55
SPTBN1-206ENST00000602898 ZCWPW1Q9H0M4 648 aa5.38□□□□□ -1.55
SPTBN1-206ENST00000602898 CABP1Q9NZU7 370 aa5.38□□□□□ -1.55
SPTBN1-206ENST00000602898 KLK14Q9P0G3 267 aa5.38□□□□□ -1.55
SPTBN1-206ENST00000602898 VPS28Q9UK41 221 aa5.38□□□□□ -1.55
SPTBN1-206ENST00000602898 MAGED2Q9UNF1 606 aaPredicted RBP5.38□□□□□ -1.55
SPTBN1-206ENST00000602898 BZW2Q9Y6E2 419 aaKnown RBP5.38□□□□□ -1.55
SPTBN1-206ENST00000602898 KNDC1Q76NI1 1749 aa5.38□□□□□ -1.55
SPTBN1-206ENST00000602898 SHANK3Q9BYB0 1731 aa5.38□□□□□ -1.55
SPTBN1-206ENST00000602898 CICQ96RK0 1608 aaPredicted RBP5.38□□□□□ -1.55
SPTBN1-206ENST00000602898 TMEM94Q12767 1356 aa5.38□□□□□ -1.55
Retrieved 100 of 20,778 RNA–protein pairs in 35.2 ms