RNA–Protein interactions for RNA: ENST00000602655.5

PPFIA3-206, Transcript of PTPRF interacting protein alpha 3, humanhuman

TSL 1 (best)

Gene PPFIA3, Length 3,493 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPFIA3-206ENST00000602655 NEK9Q8TD19 979 aa16.36■□□□□ 0.21
PPFIA3-206ENST00000602655 KIAA1683Q9H0B3 1180 aa16.36■□□□□ 0.21
PPFIA3-206ENST00000602655 RANBP17Q9H2T7 1088 aaKnown RBP16.36■□□□□ 0.21
PPFIA3-206ENST00000602655 ZWILCHQ9H900 591 aa16.36■□□□□ 0.21
PPFIA3-206ENST00000602655 DMAP1Q9NPF5 467 aaPredicted RBP16.36■□□□□ 0.21
PPFIA3-206ENST00000602655 GOLGA8IPA6NC78 632 aa16.36■□□□□ 0.21
PPFIA3-206ENST00000602655 GOLGA8JA6NMD2 632 aa16.36■□□□□ 0.21
PPFIA3-206ENST00000602655 STX2P32856 288 aa16.36■□□□□ 0.21
PPFIA3-206ENST00000602655 EIF3BP55884 814 aaKnown RBP16.36■□□□□ 0.21
PPFIA3-206ENST00000602655 SLC29A2Q14542 456 aa16.36■□□□□ 0.21
PPFIA3-206ENST00000602655 RFX8Q6ZV50 586 aa16.36■□□□□ 0.21
PPFIA3-206ENST00000602655 LCA5Q86VQ0 697 aa16.36■□□□□ 0.21
PPFIA3-206ENST00000602655 ZBED3Q96IU2 234 aaPredicted RBP16.36■□□□□ 0.21
PPFIA3-206ENST00000602655 PYM1Q9BRP8 204 aaKnown RBP16.36■□□□□ 0.21
PPFIA3-206ENST00000602655 TEKT3Q9BXF9 490 aa16.36■□□□□ 0.21
PPFIA3-206ENST00000602655 IQCGQ9H095 443 aaKnown RBP16.36■□□□□ 0.21
PPFIA3-206ENST00000602655 ARHGEF3Q9NR81 526 aa16.36■□□□□ 0.21
PPFIA3-206ENST00000602655 GINS2Q9Y248 185 aa16.36■□□□□ 0.21
PPFIA3-206ENST00000602655 SNX24Q9Y343 169 aa16.36■□□□□ 0.21
PPFIA3-206ENST00000602655 NPM3O75607 178 aaKnown RBP16.36■□□□□ 0.21
PPFIA3-206ENST00000602655 NR3C2P08235 984 aa16.36■□□□□ 0.21
PPFIA3-206ENST00000602655 SPATA31C1P0DKV0 1188 aa16.36■□□□□ 0.21
PPFIA3-206ENST00000602655 COPB2P35606 906 aa16.36■□□□□ 0.21
PPFIA3-206ENST00000602655 LARP7Q4G0J3 582 aaKnown RBP eCLIP16.36■□□□□ 0.21
PPFIA3-206ENST00000602655 GJC2Q5T442 439 aaPredicted RBP16.36■□□□□ 0.21
PPFIA3-206ENST00000602655 ETNPPLQ8TBG4 499 aa16.36■□□□□ 0.21
PPFIA3-206ENST00000602655 ADARB2Q9NS39 739 aaKnown RBP16.36■□□□□ 0.21
PPFIA3-206ENST00000602655 ASB3Q9Y575 518 aa16.36■□□□□ 0.21
PPFIA3-206ENST00000602655 PGRMC1O00264 195 aaKnown RBP16.35■□□□□ 0.21
PPFIA3-206ENST00000602655 MRPS9P82933 396 aaKnown RBP16.35■□□□□ 0.21
PPFIA3-206ENST00000602655 FKBP1CQ5VVH2 108 aa16.35■□□□□ 0.21
PPFIA3-206ENST00000602655 TAOK1Q7L7X3 1001 aa16.35■□□□□ 0.21
PPFIA3-206ENST00000602655 GIMAP8Q8ND71 665 aaPredicted RBP16.35■□□□□ 0.21
PPFIA3-206ENST00000602655 ERP27Q96DN0 273 aa16.35■□□□□ 0.21
PPFIA3-206ENST00000602655 SLC38A10Q9HBR0 1119 aa16.35■□□□□ 0.21
PPFIA3-206ENST00000602655 FAM114A2Q9NRY5 505 aa16.35■□□□□ 0.21
PPFIA3-206ENST00000602655 GRID2IPA4D2P6 1211 aa16.35■□□□□ 0.21
PPFIA3-206ENST00000602655 SLITRK3O94933 977 aa16.35■□□□□ 0.21
PPFIA3-206ENST00000602655 TPBGLP0DKB5 382 aa16.35■□□□□ 0.21
PPFIA3-206ENST00000602655 CFAP157Q5JU67 520 aa16.35■□□□□ 0.21
PPFIA3-206ENST00000602655 SWSAP1Q6NVH7 229 aa16.35■□□□□ 0.21
PPFIA3-206ENST00000602655 NLRX1Q86UT6 975 aa16.35■□□□□ 0.21
PPFIA3-206ENST00000602655 EPS8L3Q8TE67 593 aaKnown RBP16.35■□□□□ 0.21
PPFIA3-206ENST00000602655 NT5C3AQ9H0P0 336 aa16.35■□□□□ 0.21
PPFIA3-206ENST00000602655 TSPYL2Q9H2G4 693 aaPredicted RBP16.35■□□□□ 0.21
PPFIA3-206ENST00000602655 RRAGCQ9HB90 399 aa16.35■□□□□ 0.21
PPFIA3-206ENST00000602655 STOML1Q9UBI4 398 aa16.35■□□□□ 0.21
PPFIA3-206ENST00000602655 LAMA2P24043 3122 aaKnown RBP16.35■□□□□ 0.21
PPFIA3-206ENST00000602655 NRXN2Q9P2S2 1712 aa16.35■□□□□ 0.21
PPFIA3-206ENST00000602655 OPHN1O60890 802 aa16.35■□□□□ 0.21
PPFIA3-206ENST00000602655 RHOBTB3O94955 611 aa16.35■□□□□ 0.21
PPFIA3-206ENST00000602655 ARSHQ5FYA8 562 aa16.35■□□□□ 0.21
PPFIA3-206ENST00000602655 DUSP9Q99956 384 aaKnown RBP16.35■□□□□ 0.21
PPFIA3-206ENST00000602655 PACSIN1Q9BY11 444 aa16.35■□□□□ 0.21
PPFIA3-206ENST00000602655 MAF1Q9H063 256 aa16.35■□□□□ 0.21
PPFIA3-206ENST00000602655 GLT8D2Q9H1C3 349 aa16.35■□□□□ 0.21
PPFIA3-206ENST00000602655 KCNMB3Q9NPA1 279 aa16.35■□□□□ 0.21
PPFIA3-206ENST00000602655 TXLNGQ9NUQ3 528 aa16.35■□□□□ 0.21
PPFIA3-206ENST00000602655 CYP39A1Q9NYL5 469 aa16.35■□□□□ 0.21
PPFIA3-206ENST00000602655 NR2F2P24468 414 aa16.34■□□□□ 0.21
PPFIA3-206ENST00000602655 CCNE1P24864 410 aa16.34■□□□□ 0.21
PPFIA3-206ENST00000602655 UNC13DQ70J99 1090 aa16.34■□□□□ 0.21
PPFIA3-206ENST00000602655 OTOP1Q7RTM1 612 aa16.34■□□□□ 0.21
PPFIA3-206ENST00000602655 PEX26Q7Z412 305 aa16.34■□□□□ 0.21
PPFIA3-206ENST00000602655 RBBP8NLQ8NC74 664 aaPredicted RBP16.34■□□□□ 0.21
PPFIA3-206ENST00000602655 MTMR14Q8NCE2 650 aa16.34■□□□□ 0.21
PPFIA3-206ENST00000602655 CDCA5Q96FF9 252 aa16.34■□□□□ 0.21
PPFIA3-206ENST00000602655 TSG101Q99816 390 aa16.34■□□□□ 0.21
PPFIA3-206ENST00000602655 EHMT1Q9H9B1 1298 aa16.34■□□□□ 0.21
PPFIA3-206ENST00000602655 PGAP2Q9UHJ9 254 aa16.34■□□□□ 0.21
PPFIA3-206ENST00000602655 RASGRF2O14827 1237 aa16.34■□□□□ 0.21
PPFIA3-206ENST00000602655 TBC1D12O60347 775 aa16.34■□□□□ 0.21
PPFIA3-206ENST00000602655 EPHB2P29323 1055 aa16.34■□□□□ 0.21
PPFIA3-206ENST00000602655 PMS2P54278 862 aa16.34■□□□□ 0.21
PPFIA3-206ENST00000602655 BTNL9Q6UXG8 535 aa16.34■□□□□ 0.21
PPFIA3-206ENST00000602655 CLEC4DQ8WXI8 215 aa16.34■□□□□ 0.21
PPFIA3-206ENST00000602655 SLC10A4Q96EP9 437 aa16.34■□□□□ 0.21
PPFIA3-206ENST00000602655 RMDN2Q96LZ7 410 aa16.34■□□□□ 0.21
PPFIA3-206ENST00000602655 NOC2LQ9Y3T9 749 aaKnown RBP16.34■□□□□ 0.21
PPFIA3-206ENST00000602655 MYH4Q9Y623 1939 aa16.34■□□□□ 0.21
PPFIA3-206ENST00000602655 CASP4P49662 377 aa16.33■□□□□ 0.21
PPFIA3-206ENST00000602655 MAP7Q14244 749 aa16.33■□□□□ 0.21
PPFIA3-206ENST00000602655 IRGCQ6NXR0 463 aa16.33■□□□□ 0.21
PPFIA3-206ENST00000602655 HS2ST1Q7LGA3 356 aa16.33■□□□□ 0.21
PPFIA3-206ENST00000602655 STMN2Q93045 179 aa16.33■□□□□ 0.21
PPFIA3-206ENST00000602655 CENPTQ96BT3 561 aa16.33■□□□□ 0.21
PPFIA3-206ENST00000602655 INPP4AQ96PE3 977 aaPredicted RBP16.33■□□□□ 0.21
PPFIA3-206ENST00000602655 BICDL2A1A5D9 508 aa16.33■□□□□ 0.2
PPFIA3-206ENST00000602655 SMAPO00193 183 aa16.33■□□□□ 0.2
PPFIA3-206ENST00000602655 UGCGQ16739 394 aa16.33■□□□□ 0.2
PPFIA3-206ENST00000602655 TKFCQ3LXA3 575 aa16.33■□□□□ 0.2
PPFIA3-206ENST00000602655 MTERF2Q49AM1 385 aa16.33■□□□□ 0.2
PPFIA3-206ENST00000602655 APLFQ8IW19 511 aaPredicted RBP16.33■□□□□ 0.2
PPFIA3-206ENST00000602655 ATXN2LQ8WWM7 1075 aaKnown RBP16.33■□□□□ 0.2
PPFIA3-206ENST00000602655 LPAR1Q92633 364 aa16.33■□□□□ 0.2
PPFIA3-206ENST00000602655 RXFP1Q9HBX9 757 aa16.33■□□□□ 0.2
PPFIA3-206ENST00000602655 NMRK1Q9NWW6 199 aa16.33■□□□□ 0.2
PPFIA3-206ENST00000602655 PAIP2BQ9ULR5 123 aaKnown RBP16.33■□□□□ 0.2
PPFIA3-206ENST00000602655 FGFR4P22455 802 aa16.33■□□□□ 0.2
PPFIA3-206ENST00000602655 POLR2FP61218 127 aaKnown RBP16.33■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 20.7 ms