RNA–Protein interactions for RNA: ENST00000602223.5

STRN4-223, Transcript of striatin 4, human

TSL 4

Gene STRN4, Length 554 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
STRN4-223	ENST00000602223	SLC10A6	Q3KNW5	377 aa		13.56	□□□□□ -0.24
STRN4-223	ENST00000602223	RRAGB	Q5VZM2	374 aa		13.56	□□□□□ -0.24
STRN4-223	ENST00000602223	PRSS55	Q6UWB4	352 aa	Predicted RBP	13.56	□□□□□ -0.24
STRN4-223	ENST00000602223	CD300LG	Q6UXG3	332 aa		13.56	□□□□□ -0.24
STRN4-223	ENST00000602223	C15orf39	Q6ZRI6	1047 aa		13.56	□□□□□ -0.24
STRN4-223	ENST00000602223	LINC00301	Q8NCQ3	95 aa		13.56	□□□□□ -0.24
STRN4-223	ENST00000602223	CMAS	Q8NFW8	434 aa	Predicted RBP	13.56	□□□□□ -0.24
STRN4-223	ENST00000602223	HDAC7	Q8WUI4	952 aa		13.56	□□□□□ -0.24
STRN4-223	ENST00000602223	TTPAL	Q9BTX7	342 aa		13.56	□□□□□ -0.24
STRN4-223	ENST00000602223	SLC38A7	Q9NVC3	462 aa		13.56	□□□□□ -0.24
STRN4-223	ENST00000602223	DPP7	Q9UHL4	492 aa		13.56	□□□□□ -0.24
STRN4-223	ENST00000602223	TBX20	Q9UMR3	447 aa		13.56	□□□□□ -0.24
STRN4-223	ENST00000602223	NR2E1	Q9Y466	385 aa		13.56	□□□□□ -0.24
STRN4-223	ENST00000602223	TGM5	O43548	720 aa		13.55	□□□□□ -0.24
STRN4-223	ENST00000602223	PAPLN	O95428	1278 aa		13.55	□□□□□ -0.24
STRN4-223	ENST00000602223	RPL17	P18621	184 aa	Known RBP	13.55	□□□□□ -0.24
STRN4-223	ENST00000602223	FGFR3	P22607	806 aa		13.55	□□□□□ -0.24
STRN4-223	ENST00000602223	SP100	P23497	879 aa	Predicted RBP	13.55	□□□□□ -0.24
STRN4-223	ENST00000602223	ABCD1	P33897	745 aa		13.55	□□□□□ -0.24
STRN4-223	ENST00000602223	LIG4	P49917	911 aa		13.55	□□□□□ -0.24
STRN4-223	ENST00000602223	GTF2B	Q00403	316 aa		13.55	□□□□□ -0.24
STRN4-223	ENST00000602223	STK38	Q15208	465 aa		13.55	□□□□□ -0.24
STRN4-223	ENST00000602223	SEZ6	Q53EL9	994 aa		13.55	□□□□□ -0.24
STRN4-223	ENST00000602223	LILRA6	Q6PI73	481 aa		13.55	□□□□□ -0.24
STRN4-223	ENST00000602223	ELMSAN1	Q6PJG2	1045 aa		13.55	□□□□□ -0.24
STRN4-223	ENST00000602223	PDZRN4	Q6ZMN7	1036 aa	Predicted RBP	13.55	□□□□□ -0.24
STRN4-223	ENST00000602223	CCDC73	Q6ZRK6	1079 aa		13.55	□□□□□ -0.24
STRN4-223	ENST00000602223	CEP57	Q86XR8	500 aa		13.55	□□□□□ -0.24
STRN4-223	ENST00000602223	PALB2	Q86YC2	1186 aa		13.55	□□□□□ -0.24
STRN4-223	ENST00000602223	GLYCTK	Q8IVS8	523 aa		13.55	□□□□□ -0.24
STRN4-223	ENST00000602223	C3orf58	Q8NDZ4	430 aa		13.55	□□□□□ -0.24
STRN4-223	ENST00000602223	LNX1	Q8TBB1	728 aa	Predicted RBP	13.55	□□□□□ -0.24
STRN4-223	ENST00000602223	BICD1	Q96G01	975 aa		13.55	□□□□□ -0.24
STRN4-223	ENST00000602223	DDX27	Q96GQ7	796 aa	Known RBP	13.55	□□□□□ -0.24
STRN4-223	ENST00000602223	ZNF396	Q96N95	335 aa	Predicted RBP	13.55	□□□□□ -0.24
STRN4-223	ENST00000602223	RHOBTB2	Q9BYZ6	727 aa		13.55	□□□□□ -0.24
STRN4-223	ENST00000602223	ST6GALNAC4	Q9H4F1	302 aa		13.55	□□□□□ -0.24
STRN4-223	ENST00000602223	ZHX3	Q9H4I2	956 aa		13.55	□□□□□ -0.24
STRN4-223	ENST00000602223	PLEKHA4	Q9H4M7	779 aa		13.55	□□□□□ -0.24
STRN4-223	ENST00000602223	SCN1A	P35498	2009 aa		13.54	□□□□□ -0.24
STRN4-223	ENST00000602223	NOTCH4	Q99466	2003 aa		13.54	□□□□□ -0.24
STRN4-223	ENST00000602223		A0A087X0B3	334 aa		13.54	□□□□□ -0.24
STRN4-223	ENST00000602223	MYMK	A6NI61	221 aa		13.54	□□□□□ -0.24
STRN4-223	ENST00000602223	C2CD4D	B7Z1M9	353 aa		13.54	□□□□□ -0.24
STRN4-223	ENST00000602223	PODXL	O00592	558 aa		13.54	□□□□□ -0.24
STRN4-223	ENST00000602223	HNRNPDL	O14979	420 aa	Known RBP	13.54	□□□□□ -0.24
STRN4-223	ENST00000602223	PPP6R2	O75170	966 aa		13.54	□□□□□ -0.24
STRN4-223	ENST00000602223	HSP90AA1	P07900	732 aa	Known RBP	13.54	□□□□□ -0.24
STRN4-223	ENST00000602223	CLTA	P09496	248 aa		13.54	□□□□□ -0.24
STRN4-223	ENST00000602223	CXCL8	P10145	99 aa		13.54	□□□□□ -0.24
STRN4-223	ENST00000602223	NMT1	P30419	496 aa	Known RBP	13.54	□□□□□ -0.24
STRN4-223	ENST00000602223	MATR3	P43243	847 aa	Known RBP eCLIP	13.54	□□□□□ -0.24
STRN4-223	ENST00000602223	PSMD5	Q16401	504 aa		13.54	□□□□□ -0.24
STRN4-223	ENST00000602223	PDXDC1	Q6P996	788 aa		13.54	□□□□□ -0.24
STRN4-223	ENST00000602223	CYP26C1	Q6V0L0	522 aa		13.54	□□□□□ -0.24
STRN4-223	ENST00000602223	SV2B	Q7L1I2	683 aa		13.54	□□□□□ -0.24
STRN4-223	ENST00000602223	DYM	Q7RTS9	669 aa		13.54	□□□□□ -0.24
STRN4-223	ENST00000602223	MAP4K3	Q8IVH8	894 aa		13.54	□□□□□ -0.24
STRN4-223	ENST00000602223	DDX12P	Q92771	950 aa		13.54	□□□□□ -0.24
STRN4-223	ENST00000602223	EDA	Q92838	391 aa		13.54	□□□□□ -0.24
STRN4-223	ENST00000602223	DNAJC19	Q96DA6	116 aa		13.54	□□□□□ -0.24
STRN4-223	ENST00000602223	CLSTN3	Q9BQT9	956 aa		13.54	□□□□□ -0.24
STRN4-223	ENST00000602223	PLEKHA5	Q9HAU0	1116 aa		13.54	□□□□□ -0.24
STRN4-223	ENST00000602223	TSHZ2	Q9NRE2	1034 aa		13.54	□□□□□ -0.24
STRN4-223	ENST00000602223	UST	Q9Y2C2	406 aa		13.54	□□□□□ -0.24
STRN4-223	ENST00000602223	CCDC195	A0A1B0GUA6	201 aa		13.53	□□□□□ -0.24
STRN4-223	ENST00000602223	TTC26	A0AVF1	554 aa		13.53	□□□□□ -0.24
STRN4-223	ENST00000602223	SPTLC2	O15270	562 aa		13.53	□□□□□ -0.24
STRN4-223	ENST00000602223	TRAPPC3	O43617	180 aa		13.53	□□□□□ -0.24
STRN4-223	ENST00000602223	FAM189A1	O60320	539 aa		13.53	□□□□□ -0.24
STRN4-223	ENST00000602223	RFPL2	O75678	378 aa		13.53	□□□□□ -0.24
STRN4-223	ENST00000602223	YEATS4	O95619	227 aa		13.53	□□□□□ -0.24
STRN4-223	ENST00000602223	F13A1	P00488	732 aa		13.53	□□□□□ -0.24
STRN4-223	ENST00000602223	SPATA31D3	P0C874	917 aa		13.53	□□□□□ -0.24
STRN4-223	ENST00000602223	ZSCAN22	P10073	491 aa	Predicted RBP	13.53	□□□□□ -0.24
STRN4-223	ENST00000602223	RPL9	P32969	192 aa	Known RBP	13.53	□□□□□ -0.24
STRN4-223	ENST00000602223	TNFSF9	P41273	254 aa		13.53	□□□□□ -0.24
STRN4-223	ENST00000602223	STAT6	P42226	847 aa		13.53	□□□□□ -0.24
STRN4-223	ENST00000602223	BRCC3	P46736	316 aa		13.53	□□□□□ -0.24
STRN4-223	ENST00000602223	ZXDA	P98168	799 aa		13.53	□□□□□ -0.24
STRN4-223	ENST00000602223	KYAT1	Q16773	422 aa		13.53	□□□□□ -0.24
STRN4-223	ENST00000602223	PTPN21	Q16825	1174 aa		13.53	□□□□□ -0.24
STRN4-223	ENST00000602223	SLC39A4	Q6P5W5	647 aa		13.53	□□□□□ -0.24
STRN4-223	ENST00000602223	SPATA31D4	Q6ZUB0	917 aa		13.53	□□□□□ -0.24
STRN4-223	ENST00000602223	CCDC149	Q6ZUS6	474 aa		13.53	□□□□□ -0.24
STRN4-223	ENST00000602223	ZNF720	Q7Z2F6	126 aa		13.53	□□□□□ -0.24
STRN4-223	ENST00000602223	SFR1	Q86XK3	245 aa		13.53	□□□□□ -0.24
STRN4-223	ENST00000602223	ZDHHC14	Q8IZN3	488 aa		13.53	□□□□□ -0.24
STRN4-223	ENST00000602223	TDRD5	Q8NAT2	981 aa	Known RBP	13.53	□□□□□ -0.24
STRN4-223	ENST00000602223	KREMEN2	Q8NCW0	462 aa		13.53	□□□□□ -0.24
STRN4-223	ENST00000602223	C18orf25	Q96B23	403 aa	Predicted RBP	13.53	□□□□□ -0.24
STRN4-223	ENST00000602223	ZDHHC7	Q9NXF8	308 aa		13.53	□□□□□ -0.24
STRN4-223	ENST00000602223	TFIP11	Q9UBB9	837 aa	Known RBP	13.53	□□□□□ -0.24
STRN4-223	ENST00000602223	SEL1L	Q9UBV2	794 aa		13.53	□□□□□ -0.24
STRN4-223	ENST00000602223	RAPGEFL1	Q9UHV5	662 aa		13.53	□□□□□ -0.24
STRN4-223	ENST00000602223	FBXW11	Q9UKB1	542 aa		13.53	□□□□□ -0.24
STRN4-223	ENST00000602223		A0A0B4J269	797 aa		13.52	□□□□□ -0.25
STRN4-223	ENST00000602223		I3L4J1	428 aa		13.52	□□□□□ -0.25
STRN4-223	ENST00000602223	OGT	O15294	1046 aa		13.52	□□□□□ -0.25
STRN4-223	ENST00000602223	ADAM12	O43184	909 aa		13.52	□□□□□ -0.25

Retrieved 100 of 20,778 RNA–protein pairs in 25.5 ms