RNA–Protein interactions for RNA: ENST00000598570.5

USHBP1-209, Transcript of USH1 protein network component harmonin binding protein 1, humanhuman

TSL 3

Gene USHBP1, Length 588 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USHBP1-209ENST00000598570 PSMD2Q13200 908 aa19.23■□□□□ 0.67
USHBP1-209ENST00000598570 SNW1Q13573 536 aaKnown RBP19.23■□□□□ 0.67
USHBP1-209ENST00000598570 ZBTB41Q5SVQ8 909 aa19.23■□□□□ 0.67
USHBP1-209ENST00000598570 CEP57L1Q8IYX8 460 aa19.23■□□□□ 0.67
USHBP1-209ENST00000598570 FMR1NBQ8N0W7 255 aaPredicted RBP19.23■□□□□ 0.67
USHBP1-209ENST00000598570 GLIS3Q8NEA6 775 aa19.23■□□□□ 0.67
USHBP1-209ENST00000598570 GADD45GIP1Q8TAE8 222 aaPredicted RBP19.23■□□□□ 0.67
USHBP1-209ENST00000598570 MICAL1Q8TDZ2 1067 aa19.23■□□□□ 0.67
USHBP1-209ENST00000598570 BICD1Q96G01 975 aa19.23■□□□□ 0.67
USHBP1-209ENST00000598570 GDPD2Q9HCC8 539 aa19.23■□□□□ 0.67
USHBP1-209ENST00000598570 TBC1D7Q9P0N9 293 aa19.23■□□□□ 0.67
USHBP1-209ENST00000598570 DERAQ9Y315 318 aa19.23■□□□□ 0.67
USHBP1-209ENST00000598570 VCANP13611 3396 aa19.23■□□□□ 0.67
USHBP1-209ENST00000598570 KIAA0391O15091 583 aaKnown RBP19.22■□□□□ 0.67
USHBP1-209ENST00000598570 CLASP2O75122 1294 aaKnown RBP19.22■□□□□ 0.67
USHBP1-209ENST00000598570 ZNF202O95125 648 aa19.22■□□□□ 0.67
USHBP1-209ENST00000598570 GCNT3O95395 438 aa19.22■□□□□ 0.67
USHBP1-209ENST00000598570 CASP1P29466 404 aa19.22■□□□□ 0.67
USHBP1-209ENST00000598570 LRPAP1P30533 357 aa19.22■□□□□ 0.67
USHBP1-209ENST00000598570 TNFSF9P41273 254 aa19.22■□□□□ 0.67
USHBP1-209ENST00000598570 OSTNP61366 133 aa19.22■□□□□ 0.67
USHBP1-209ENST00000598570 ASIC1P78348 528 aa19.22■□□□□ 0.67
USHBP1-209ENST00000598570 DLX2Q07687 328 aaPredicted RBP19.22■□□□□ 0.67
USHBP1-209ENST00000598570 BMS1Q14692 1282 aaKnown RBP19.22■□□□□ 0.67
USHBP1-209ENST00000598570 PUS10Q3MIT2 529 aaKnown RBP19.22■□□□□ 0.67
USHBP1-209ENST00000598570 SEZ6Q53EL9 994 aa19.22■□□□□ 0.67
USHBP1-209ENST00000598570 TJAP1Q5JTD0 557 aa19.22■□□□□ 0.67
USHBP1-209ENST00000598570 FAM26FQ5R3K3 315 aa19.22■□□□□ 0.67
USHBP1-209ENST00000598570 FUT10Q6P4F1 479 aa19.22■□□□□ 0.67
USHBP1-209ENST00000598570 KRBA2Q6ZNG9 492 aa19.22■□□□□ 0.67
USHBP1-209ENST00000598570 ELOA2Q8IYF1 753 aaPredicted RBP19.22■□□□□ 0.67
USHBP1-209ENST00000598570 FSIP1Q8NA03 581 aa19.22■□□□□ 0.67
USHBP1-209ENST00000598570 TMEM87AQ8NBN3 555 aa19.22■□□□□ 0.67
USHBP1-209ENST00000598570 SCFD1Q8WVM8 642 aa19.22■□□□□ 0.67
USHBP1-209ENST00000598570 HPS3Q969F9 1004 aa19.22■□□□□ 0.67
USHBP1-209ENST00000598570 MSTO1Q9BUK6 570 aa19.22■□□□□ 0.67
USHBP1-209ENST00000598570 ASB7Q9H672 318 aa19.22■□□□□ 0.67
USHBP1-209ENST00000598570 ENTPD7Q9NQZ7 604 aa19.22■□□□□ 0.67
USHBP1-209ENST00000598570 FNIP2Q9P278 1114 aa19.22■□□□□ 0.67
USHBP1-209ENST00000598570 AGO2Q9UKV8 859 aaKnown RBP19.22■□□□□ 0.67
USHBP1-209ENST00000598570 SSX2IPQ9Y2D8 614 aa19.22■□□□□ 0.67
USHBP1-209ENST00000598570 PRG3Q9Y2Y8 225 aaPredicted RBP19.22■□□□□ 0.67
USHBP1-209ENST00000598570 UBE4BO95155 1302 aa19.22■□□□□ 0.67
USHBP1-209ENST00000598570 LACTBL1A8MY62 500 aa19.21■□□□□ 0.67
USHBP1-209ENST00000598570 LINC01565O15544 149 aa19.21■□□□□ 0.67
USHBP1-209ENST00000598570 TGFB1I1O43294 461 aa19.21■□□□□ 0.67
USHBP1-209ENST00000598570 TBX10O75333 385 aa19.21■□□□□ 0.67
USHBP1-209ENST00000598570 KIF4AO95239 1232 aa19.21■□□□□ 0.67
USHBP1-209ENST00000598570 CXCL8P10145 99 aa19.21■□□□□ 0.67
USHBP1-209ENST00000598570 FGFR3P22607 806 aa19.21■□□□□ 0.67
USHBP1-209ENST00000598570 IGFBP6P24592 240 aaPredicted RBP19.21■□□□□ 0.67
USHBP1-209ENST00000598570 AFMP43652 599 aa19.21■□□□□ 0.67
USHBP1-209ENST00000598570 DPYDQ12882 1025 aa19.21■□□□□ 0.67
USHBP1-209ENST00000598570 PLPP4Q5VZY2 271 aa19.21■□□□□ 0.67
USHBP1-209ENST00000598570 CLEC17AQ6ZS10 378 aa19.21■□□□□ 0.67
USHBP1-209ENST00000598570 STXBP4Q6ZWJ1 553 aa19.21■□□□□ 0.67
USHBP1-209ENST00000598570 GRAMD1CQ8IYS0 662 aa19.21■□□□□ 0.67
USHBP1-209ENST00000598570 FBXL18Q96ME1 805 aa19.21■□□□□ 0.67
USHBP1-209ENST00000598570 BLZF1Q9H2G9 400 aa19.21■□□□□ 0.67
USHBP1-209ENST00000598570 VWA8A3KMH1 1905 aa19.21■□□□□ 0.67
USHBP1-209ENST00000598570 GRXCR2A6NFK2 248 aa19.2■□□□□ 0.66
USHBP1-209ENST00000598570 CASTOR2A6NHX0 329 aa19.2■□□□□ 0.66
USHBP1-209ENST00000598570 PER2O15055 1255 aa19.2■□□□□ 0.66
USHBP1-209ENST00000598570 PRPF6O94906 941 aaKnown RBP19.2■□□□□ 0.66
USHBP1-209ENST00000598570 CLCNKBP51801 687 aa19.2■□□□□ 0.66
USHBP1-209ENST00000598570 ELAVL2Q12926 359 aaKnown RBP19.2■□□□□ 0.66
USHBP1-209ENST00000598570 SKIV2LQ15477 1246 aaKnown RBP19.2■□□□□ 0.66
USHBP1-209ENST00000598570 USP41Q3LFD5 358 aa19.2■□□□□ 0.66
USHBP1-209ENST00000598570 GLRA4Q5JXX5 417 aa19.2■□□□□ 0.66
USHBP1-209ENST00000598570 C12orf56Q8IXR9 622 aa19.2■□□□□ 0.66
USHBP1-209ENST00000598570 C3orf58Q8NDZ4 430 aa19.2■□□□□ 0.66
USHBP1-209ENST00000598570 SPATA20Q8TB22 786 aa19.2■□□□□ 0.66
USHBP1-209ENST00000598570 C18orf25Q96B23 403 aaPredicted RBP19.2■□□□□ 0.66
USHBP1-209ENST00000598570 TIGD1Q96MW7 591 aa19.2■□□□□ 0.66
USHBP1-209ENST00000598570 KLHL5Q96PQ7 755 aa19.2■□□□□ 0.66
USHBP1-209ENST00000598570 S1PR5Q9H228 398 aa19.2■□□□□ 0.66
USHBP1-209ENST00000598570 MRPL17Q9NRX2 175 aaKnown RBP19.2■□□□□ 0.66
USHBP1-209ENST00000598570 CHMP5Q9NZZ3 219 aa19.2■□□□□ 0.66
USHBP1-209ENST00000598570 CACNG4Q9UBN1 327 aa19.2■□□□□ 0.66
USHBP1-209ENST00000598570 SF3B1O75533 1304 aaKnown RBP eCLIP19.2■□□□□ 0.66
USHBP1-209ENST00000598570 TADA2AO75478 443 aa19.19■□□□□ 0.66
USHBP1-209ENST00000598570 LDHAP00338 332 aaKnown RBP19.19■□□□□ 0.66
USHBP1-209ENST00000598570 CNPP09543 421 aaKnown RBP19.19■□□□□ 0.66
USHBP1-209ENST00000598570 KCNA5P22460 613 aa19.19■□□□□ 0.66
USHBP1-209ENST00000598570 GLUD2P49448 558 aa19.19■□□□□ 0.66
USHBP1-209ENST00000598570 AARSP49588 968 aaKnown RBP eCLIP19.19■□□□□ 0.66
USHBP1-209ENST00000598570 SPATA1Q5VX52 437 aa19.19■□□□□ 0.66
USHBP1-209ENST00000598570 KANK3Q6NY19 840 aa19.19■□□□□ 0.66
USHBP1-209ENST00000598570 LILRA6Q6PI73 481 aa19.19■□□□□ 0.66
USHBP1-209ENST00000598570 RBM23Q86U06 439 aaKnown RBP19.19■□□□□ 0.66
USHBP1-209ENST00000598570 NT5DC4Q86YG4 428 aa19.19■□□□□ 0.66
USHBP1-209ENST00000598570 SMRP1Q8NCR6 262 aa19.19■□□□□ 0.66
USHBP1-209ENST00000598570 PIK3R5Q8WYR1 880 aa19.19■□□□□ 0.66
USHBP1-209ENST00000598570 RABGGTAQ92696 567 aa19.19■□□□□ 0.66
USHBP1-209ENST00000598570 RPF1Q9H9Y2 349 aaKnown RBP19.19■□□□□ 0.66
USHBP1-209ENST00000598570 CLDND1Q9NY35 253 aa19.19■□□□□ 0.66
USHBP1-209ENST00000598570 CGNQ9P2M7 1197 aaKnown RBP19.19■□□□□ 0.66
USHBP1-209ENST00000598570 C2CD2Q9Y426 696 aa19.19■□□□□ 0.66
USHBP1-209ENST00000598570 ANO9A1A5B4 782 aa19.18■□□□□ 0.66
USHBP1-209ENST00000598570 EXTL3O43909 919 aa19.18■□□□□ 0.66
Retrieved 100 of 20,778 RNA–protein pairs in 43.9 ms