RNA–Protein interactions for RNA: ENST00000596379.1

LINC02560-201, Transcript of long intergenic non-protein coding RNA 2560, humanhuman

BASIC

Gene LINC02560, Length 459 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC02560-201ENST00000596379 DAXXQ9UER7 740 aaPredicted RBP17.5■□□□□ 0.39
LINC02560-201ENST00000596379 NOL7Q9UMY1 257 aaKnown RBP17.5■□□□□ 0.39
LINC02560-201ENST00000596379 TNFSF13BQ9Y275 285 aa17.5■□□□□ 0.39
LINC02560-201ENST00000596379 E9PMD0 336 aa17.49■□□□□ 0.39
LINC02560-201ENST00000596379 TRAPPC3O43617 180 aa17.49■□□□□ 0.39
LINC02560-201ENST00000596379 POU2F2P09086 479 aa17.49■□□□□ 0.39
LINC02560-201ENST00000596379 TKTP29401 623 aaKnown RBP17.49■□□□□ 0.39
LINC02560-201ENST00000596379 BRCC3P46736 316 aa17.49■□□□□ 0.39
LINC02560-201ENST00000596379 PEX3P56589 373 aa17.49■□□□□ 0.39
LINC02560-201ENST00000596379 OSTNP61366 133 aa17.49■□□□□ 0.39
LINC02560-201ENST00000596379 SNW1Q13573 536 aaKnown RBP17.49■□□□□ 0.39
LINC02560-201ENST00000596379 MTSS1LQ765P7 747 aa17.49■□□□□ 0.39
LINC02560-201ENST00000596379 CEP120Q8N960 986 aa17.49■□□□□ 0.39
LINC02560-201ENST00000596379 FAM184AQ8NB25 1140 aa17.49■□□□□ 0.39
LINC02560-201ENST00000596379 C3orf58Q8NDZ4 430 aa17.49■□□□□ 0.39
LINC02560-201ENST00000596379 SNX29Q8TEQ0 813 aa17.49■□□□□ 0.39
LINC02560-201ENST00000596379 SHDQ96IW2 340 aa17.49■□□□□ 0.39
LINC02560-201ENST00000596379 ACO2Q99798 780 aaKnown RBP17.49■□□□□ 0.39
LINC02560-201ENST00000596379 BACE2Q9Y5Z0 518 aa17.49■□□□□ 0.39
LINC02560-201ENST00000596379 R4GN57 208 aa17.49■□□□□ 0.39
LINC02560-201ENST00000596379 VPS13AQ96RL7 3174 aa17.49■□□□□ 0.39
LINC02560-201ENST00000596379 GLULP15104 373 aa17.48■□□□□ 0.39
LINC02560-201ENST00000596379 GRM5P41594 1212 aa17.48■□□□□ 0.39
LINC02560-201ENST00000596379 NPTX2P47972 431 aa17.48■□□□□ 0.39
LINC02560-201ENST00000596379 TOB1P50616 345 aaPredicted RBP17.48■□□□□ 0.39
LINC02560-201ENST00000596379 YARSP54577 528 aaKnown RBP17.48■□□□□ 0.39
LINC02560-201ENST00000596379 HMGN5P82970 282 aaKnown RBP17.48■□□□□ 0.39
LINC02560-201ENST00000596379 SOX4Q06945 474 aaPredicted RBP17.48■□□□□ 0.39
LINC02560-201ENST00000596379 PTGDRQ13258 359 aa17.48■□□□□ 0.39
LINC02560-201ENST00000596379 PABPC1LQ4VXU2 614 aaKnown RBP17.48■□□□□ 0.39
LINC02560-201ENST00000596379 ALKAL1Q6UXT8 129 aa17.48■□□□□ 0.39
LINC02560-201ENST00000596379 ANKS3Q6ZW76 656 aa17.48■□□□□ 0.39
LINC02560-201ENST00000596379 RTL10Q7L3V2 364 aa17.48■□□□□ 0.39
LINC02560-201ENST00000596379 C1orf210Q8IVY1 113 aa17.48■□□□□ 0.39
LINC02560-201ENST00000596379 IGSF22Q8N9C0 903 aa17.48■□□□□ 0.39
LINC02560-201ENST00000596379 PJA1Q8NG27 643 aa17.48■□□□□ 0.39
LINC02560-201ENST00000596379 DDX27Q96GQ7 796 aaKnown RBP17.48■□□□□ 0.39
LINC02560-201ENST00000596379 CCDC94Q9BW85 323 aaPredicted RBP17.48■□□□□ 0.39
LINC02560-201ENST00000596379 CDT1Q9H211 546 aa17.48■□□□□ 0.39
LINC02560-201ENST00000596379 SEMA4AQ9H3S1 761 aa17.48■□□□□ 0.39
LINC02560-201ENST00000596379 TMEM134Q9H6X4 195 aa17.48■□□□□ 0.39
LINC02560-201ENST00000596379 PTPRHQ9HD43 1115 aa17.48■□□□□ 0.39
LINC02560-201ENST00000596379 DNM3Q9UQ16 869 aa17.48■□□□□ 0.39
LINC02560-201ENST00000596379 STK24Q9Y6E0 443 aa17.48■□□□□ 0.39
LINC02560-201ENST00000596379 GVINP1Q7Z2Y8 2422 aa17.48■□□□□ 0.39
LINC02560-201ENST00000596379 MIA3Q5JRA6 1907 aa17.47■□□□□ 0.39
LINC02560-201ENST00000596379 EP300Q09472 2414 aaPredicted RBP17.47■□□□□ 0.39
LINC02560-201ENST00000596379 HIP1RO75146 1068 aa17.47■□□□□ 0.39
LINC02560-201ENST00000596379 LRRN2O75325 713 aa17.47■□□□□ 0.39
LINC02560-201ENST00000596379 LMNAP02545 664 aaKnown RBP17.47■□□□□ 0.39
LINC02560-201ENST00000596379 SP9P0CG40 484 aa17.47■□□□□ 0.39
LINC02560-201ENST00000596379 SLC44A4Q53GD3 710 aa17.47■□□□□ 0.39
LINC02560-201ENST00000596379 XKR4Q5GH76 650 aa17.47■□□□□ 0.39
LINC02560-201ENST00000596379 NPAS3Q8IXF0 933 aa17.47■□□□□ 0.39
LINC02560-201ENST00000596379 DAW1Q8N136 415 aa17.47■□□□□ 0.39
LINC02560-201ENST00000596379 ING5Q8WYH8 240 aa17.47■□□□□ 0.39
LINC02560-201ENST00000596379 ZSCAN31Q96LW9 406 aaPredicted RBP17.47■□□□□ 0.39
LINC02560-201ENST00000596379 KXD1Q9BQD3 176 aa17.47■□□□□ 0.39
LINC02560-201ENST00000596379 TARS2Q9BW92 718 aaKnown RBP17.47■□□□□ 0.39
LINC02560-201ENST00000596379 TOPORSQ9NS56 1045 aaPredicted RBP17.47■□□□□ 0.39
LINC02560-201ENST00000596379 KCNH3Q9ULD8 1083 aa17.47■□□□□ 0.39
LINC02560-201ENST00000596379 PCDHB6Q9Y5E3 794 aa17.47■□□□□ 0.39
LINC02560-201ENST00000596379 PHLPP2Q6ZVD8 1323 aa17.47■□□□□ 0.39
LINC02560-201ENST00000596379 COL4A3Q01955 1670 aa17.46■□□□□ 0.39
LINC02560-201ENST00000596379 KANSL1LA0AUZ9 987 aa17.46■□□□□ 0.39
LINC02560-201ENST00000596379 PP2D1A8MPX8 630 aa17.46■□□□□ 0.39
LINC02560-201ENST00000596379 U2AF2P26368 475 aaKnown RBP eCLIP17.46■□□□□ 0.39
LINC02560-201ENST00000596379 CDC25AP30304 524 aa17.46■□□□□ 0.39
LINC02560-201ENST00000596379 FOXK2Q01167 660 aa17.46■□□□□ 0.39
LINC02560-201ENST00000596379 MLF2Q15773 248 aaPredicted RBP17.46■□□□□ 0.39
LINC02560-201ENST00000596379 IL17AQ16552 155 aa17.46■□□□□ 0.39
LINC02560-201ENST00000596379 ZNF568Q3ZCX4 644 aa17.46■□□□□ 0.39
LINC02560-201ENST00000596379 KRT79Q5XKE5 535 aa17.46■□□□□ 0.39
LINC02560-201ENST00000596379 TAS1R3Q7RTX0 852 aa17.46■□□□□ 0.39
LINC02560-201ENST00000596379 ZNF461Q8TAF7 563 aa17.46■□□□□ 0.39
LINC02560-201ENST00000596379 MCRS1Q96EZ8 462 aa17.46■□□□□ 0.39
LINC02560-201ENST00000596379 ZMAT2Q96NC0 199 aaKnown RBP17.46■□□□□ 0.39
LINC02560-201ENST00000596379 ACAP3Q96P50 834 aa17.46■□□□□ 0.39
LINC02560-201ENST00000596379 TCHPQ9BT92 498 aa17.46■□□□□ 0.39
LINC02560-201ENST00000596379 RUSC1Q9BVN2 902 aa17.46■□□□□ 0.39
LINC02560-201ENST00000596379 MRPL4Q9BYD3 311 aaKnown RBP17.46■□□□□ 0.39
LINC02560-201ENST00000596379 RAB34Q9BZG1 259 aa17.46■□□□□ 0.39
LINC02560-201ENST00000596379 KMT5AQ9NQR1 393 aa17.46■□□□□ 0.39
LINC02560-201ENST00000596379 SLC38A7Q9NVC3 462 aa17.46■□□□□ 0.39
LINC02560-201ENST00000596379 MRPS23Q9Y3D9 190 aaKnown RBP17.46■□□□□ 0.39
LINC02560-201ENST00000596379 CITO14578 2027 aa17.46■□□□□ 0.39
LINC02560-201ENST00000596379 FANCMQ8IYD8 2048 aa17.45■□□□□ 0.38
LINC02560-201ENST00000596379 SFI1A8K8P3 1242 aa17.45■□□□□ 0.38
LINC02560-201ENST00000596379 PODXLO00592 558 aa17.45■□□□□ 0.38
LINC02560-201ENST00000596379 ABLIM3O94929 683 aa17.45■□□□□ 0.38
LINC02560-201ENST00000596379 RHOP08100 348 aa17.45■□□□□ 0.38
LINC02560-201ENST00000596379 ID4P47928 161 aa17.45■□□□□ 0.38
LINC02560-201ENST00000596379 ROR1Q01973 937 aa17.45■□□□□ 0.38
LINC02560-201ENST00000596379 PRKCQQ04759 706 aa17.45■□□□□ 0.38
LINC02560-201ENST00000596379 DMP1Q13316 513 aaPredicted RBP17.45■□□□□ 0.38
LINC02560-201ENST00000596379 VARS2Q5ST30 1063 aaKnown RBP17.45■□□□□ 0.38
LINC02560-201ENST00000596379 RINT1Q6NUQ1 792 aa17.45■□□□□ 0.38
LINC02560-201ENST00000596379 C1orf186Q6ZWK4 172 aa17.45■□□□□ 0.38
LINC02560-201ENST00000596379 DRC1Q96MC2 740 aa17.45■□□□□ 0.38
LINC02560-201ENST00000596379 DDX23Q9BUQ8 820 aaKnown RBP17.45■□□□□ 0.38
Retrieved 100 of 20,778 RNA–protein pairs in 51.6 ms