RNA–Protein interactions for RNA: ENST00000593912.5

VRK3-204, Transcript of vaccinia related kinase 3, humanhuman

TSL 2

Gene VRK3, Length 551 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK3-204ENST00000593912 MFSD6LQ8IWD5 586 aa3.52□□□□□ -1.85
VRK3-204ENST00000593912 YAF2Q8IY57 180 aa3.52□□□□□ -1.85
VRK3-204ENST00000593912 NME8Q8N427 588 aa3.52□□□□□ -1.85
VRK3-204ENST00000593912 ZNF248Q8NDW4 579 aa3.52□□□□□ -1.85
VRK3-204ENST00000593912 MDGA1Q8NFP4 955 aa3.52□□□□□ -1.85
VRK3-204ENST00000593912 TSTD1Q8NFU3 115 aa3.52□□□□□ -1.85
VRK3-204ENST00000593912 RHBDD1Q8TEB9 315 aa3.52□□□□□ -1.85
VRK3-204ENST00000593912 DEPDC1BQ8WUY9 529 aa3.52□□□□□ -1.85
VRK3-204ENST00000593912 SNRNP27Q8WVK2 155 aaKnown RBP3.52□□□□□ -1.85
VRK3-204ENST00000593912 RABGGTAQ92696 567 aa3.52□□□□□ -1.85
VRK3-204ENST00000593912 EAF2Q96CJ1 260 aaPredicted RBP3.52□□□□□ -1.85
VRK3-204ENST00000593912 CHFRQ96EP1 664 aa3.52□□□□□ -1.85
VRK3-204ENST00000593912 MSANTD3Q96H12 275 aa3.52□□□□□ -1.85
VRK3-204ENST00000593912 DDRGK1Q96HY6 314 aa3.52□□□□□ -1.85
VRK3-204ENST00000593912 LRRC3BQ96PB8 259 aa3.52□□□□□ -1.85
VRK3-204ENST00000593912 TMEM209Q96SK2 561 aa3.52□□□□□ -1.85
VRK3-204ENST00000593912 GPR62Q9BZJ7 368 aa3.52□□□□□ -1.85
VRK3-204ENST00000593912 UBA5Q9GZZ9 404 aa3.52□□□□□ -1.85
VRK3-204ENST00000593912 EPB41L4AQ9HCS5 686 aaPredicted RBP3.52□□□□□ -1.85
VRK3-204ENST00000593912 TMPRSS4Q9NRS4 437 aa3.52□□□□□ -1.85
VRK3-204ENST00000593912 CHST7Q9NS84 486 aa3.52□□□□□ -1.85
VRK3-204ENST00000593912 PKD2L1Q9P0L9 805 aa3.52□□□□□ -1.85
VRK3-204ENST00000593912 PNMA2Q9UL42 364 aa3.52□□□□□ -1.85
VRK3-204ENST00000593912 WDR3Q9UNX4 943 aaKnown RBP eCLIP3.52□□□□□ -1.85
VRK3-204ENST00000593912 PLAAQ9Y263 795 aa3.52□□□□□ -1.85
VRK3-204ENST00000593912 SSX2IPQ9Y2D8 614 aa3.52□□□□□ -1.85
VRK3-204ENST00000593912 TACC2O95359 2948 aa3.52□□□□□ -1.85
VRK3-204ENST00000593912 TDRD15B5MCY1 1934 aaKnown RBP3.52□□□□□ -1.85
VRK3-204ENST00000593912 FN1P02751 2386 aaKnown RBP3.52□□□□□ -1.85
VRK3-204ENST00000593912 VPS37CA5D8V6 355 aaPredicted RBP3.51□□□□□ -1.85
VRK3-204ENST00000593912 GSG1L2A8MUP6 293 aa3.51□□□□□ -1.85
VRK3-204ENST00000593912 SPATA31C2B4DYI2 1134 aa3.51□□□□□ -1.85
VRK3-204ENST00000593912 K7ENP7 123 aa3.51□□□□□ -1.85
VRK3-204ENST00000593912 CBX4O00257 560 aa3.51□□□□□ -1.85
VRK3-204ENST00000593912 CHADO15335 359 aa3.51□□□□□ -1.85
VRK3-204ENST00000593912 MOSPD3O75425 235 aa3.51□□□□□ -1.85
VRK3-204ENST00000593912 AGFG2O95081 481 aa3.51□□□□□ -1.85
VRK3-204ENST00000593912 ALDH2P05091 517 aa3.51□□□□□ -1.85
VRK3-204ENST00000593912 SYPP08247 313 aa3.51□□□□□ -1.85
VRK3-204ENST00000593912 GOLGA8HP0CJ92 632 aa3.51□□□□□ -1.85
VRK3-204ENST00000593912 PRF1P14222 555 aa3.51□□□□□ -1.85
VRK3-204ENST00000593912 HNRNPLP14866 589 aaKnown RBP eCLIP3.51□□□□□ -1.85
VRK3-204ENST00000593912 ITGB5P18084 799 aa3.51□□□□□ -1.85
VRK3-204ENST00000593912 HOXA9P31269 272 aa3.51□□□□□ -1.85
VRK3-204ENST00000593912 ACTN2P35609 894 aa3.51□□□□□ -1.85
VRK3-204ENST00000593912 ADD2P35612 726 aa3.51□□□□□ -1.85
VRK3-204ENST00000593912 P2RY2P41231 377 aa3.51□□□□□ -1.85
VRK3-204ENST00000593912 PHKA2P46019 1235 aa3.51□□□□□ -1.85
VRK3-204ENST00000593912 OR1G1P47890 313 aa3.51□□□□□ -1.85
VRK3-204ENST00000593912 HSD17B4P51659 736 aa3.51□□□□□ -1.85
VRK3-204ENST00000593912 MLLT6P55198 1093 aaPredicted RBP3.51□□□□□ -1.85
VRK3-204ENST00000593912 PCBP4P57723 403 aaKnown RBP3.51□□□□□ -1.85
VRK3-204ENST00000593912 OS9Q13438 667 aaPredicted RBP3.51□□□□□ -1.85
VRK3-204ENST00000593912 CDC37Q16543 378 aaPredicted RBP3.51□□□□□ -1.85
VRK3-204ENST00000593912 PTPRNQ16849 979 aa3.51□□□□□ -1.85
VRK3-204ENST00000593912 EML3Q32P44 896 aa3.51□□□□□ -1.85
VRK3-204ENST00000593912 PROX2Q3B8N5 592 aa3.51□□□□□ -1.85
VRK3-204ENST00000593912 PLEKHG6Q3KR16 790 aa3.51□□□□□ -1.85
VRK3-204ENST00000593912 TMEM196Q5HYL7 178 aa3.51□□□□□ -1.85
VRK3-204ENST00000593912 RTP2Q5QGT7 225 aa3.51□□□□□ -1.85
VRK3-204ENST00000593912 AXDND1Q5T1B0 1012 aaPredicted RBP3.51□□□□□ -1.85
VRK3-204ENST00000593912 INO80CQ6PI98 192 aaPredicted RBP3.51□□□□□ -1.85
VRK3-204ENST00000593912 C1orf228Q6PIY5 440 aa3.51□□□□□ -1.85
VRK3-204ENST00000593912 TMED8Q6PL24 325 aaPredicted RBP3.51□□□□□ -1.85
VRK3-204ENST00000593912 SYT13Q7L8C5 426 aa3.51□□□□□ -1.85
VRK3-204ENST00000593912 TMPRSS12Q86WS5 348 aa3.51□□□□□ -1.85
VRK3-204ENST00000593912 HS6ST3Q8IZP7 471 aa3.51□□□□□ -1.85
VRK3-204ENST00000593912 CEP76Q8TAP6 659 aa3.51□□□□□ -1.85
VRK3-204ENST00000593912 ZSCAN18Q8TBC5 510 aaPredicted RBP3.51□□□□□ -1.85
VRK3-204ENST00000593912 EZH1Q92800 747 aaPredicted RBP3.51□□□□□ -1.85
VRK3-204ENST00000593912 SMARCD2Q92925 531 aa3.51□□□□□ -1.85
VRK3-204ENST00000593912 EXTL1Q92935 676 aa3.51□□□□□ -1.85
VRK3-204ENST00000593912 CLUAP1Q96AJ1 413 aa3.51□□□□□ -1.85
VRK3-204ENST00000593912 CLSTN3Q9BQT9 956 aa3.51□□□□□ -1.85
VRK3-204ENST00000593912 CORO1BQ9BR76 489 aa3.51□□□□□ -1.85
VRK3-204ENST00000593912 PUS7LQ9H0K6 701 aaKnown RBP3.51□□□□□ -1.85
VRK3-204ENST00000593912 GMIPQ9P107 970 aa3.51□□□□□ -1.85
VRK3-204ENST00000593912 FNIP2Q9P278 1114 aa3.51□□□□□ -1.85
VRK3-204ENST00000593912 CACNG4Q9UBN1 327 aa3.51□□□□□ -1.85
VRK3-204ENST00000593912 ITGB1BP2Q9UKP3 347 aa3.51□□□□□ -1.85
VRK3-204ENST00000593912 FNDC3AQ9Y2H6 1198 aaKnown RBP3.51□□□□□ -1.85
VRK3-204ENST00000593912 SALL2Q9Y467 1007 aaPredicted RBP3.51□□□□□ -1.85
VRK3-204ENST00000593912 CCDC168Q8NDH2 2452 aa3.5□□□□□ -1.85
VRK3-204ENST00000593912 PTPRCP08575 1304 aa3.5□□□□□ -1.85
VRK3-204ENST00000593912 NUP210Q8TEM1 1887 aaPredicted RBP3.5□□□□□ -1.85
VRK3-204ENST00000593912 OTOL1A6NHN0 477 aaPredicted RBP3.5□□□□□ -1.85
VRK3-204ENST00000593912 FIBPO43427 364 aa3.5□□□□□ -1.85
VRK3-204ENST00000593912 CILPO75339 1184 aa3.5□□□□□ -1.85
VRK3-204ENST00000593912 CLDN1O95832 211 aa3.5□□□□□ -1.85
VRK3-204ENST00000593912 PDHBP11177 359 aa3.5□□□□□ -1.85
VRK3-204ENST00000593912 ADRA1BP35368 520 aa3.5□□□□□ -1.85
VRK3-204ENST00000593912 HNF1BP35680 557 aa3.5□□□□□ -1.85
VRK3-204ENST00000593912 AFMP43652 599 aa3.5□□□□□ -1.85
VRK3-204ENST00000593912 UQCRFS1P47985 274 aa3.5□□□□□ -1.85
VRK3-204ENST00000593912 CLCN3P51790 818 aa3.5□□□□□ -1.85
VRK3-204ENST00000593912 EPHA5P54756 1037 aa3.5□□□□□ -1.85
VRK3-204ENST00000593912 NLRP11P59045 1033 aaKnown RBP3.5□□□□□ -1.85
VRK3-204ENST00000593912 ZNF543Q08ER8 600 aa3.5□□□□□ -1.85
VRK3-204ENST00000593912 FCHO2Q0JRZ9 810 aa3.5□□□□□ -1.85
VRK3-204ENST00000593912 GRSF1Q12849 480 aaKnown RBP eCLIP3.5□□□□□ -1.85
Retrieved 100 of 20,778 RNA–protein pairs in 21.9 ms