RNA–Protein interactions for RNA: ENST00000592533.5

ZNF540-210, Transcript of zinc finger protein 540, humanhuman

APPRIS P3 TSL 2 BASIC

Gene ZNF540, Length 3,147 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF540-210ENST00000592533 SAAL1Q96ER3 474 aa12.4□□□□□ -0.43
ZNF540-210ENST00000592533 DCLK3Q9C098 648 aa12.4□□□□□ -0.43
ZNF540-210ENST00000592533 MTFR1LQ9H019 292 aa12.4□□□□□ -0.43
ZNF540-210ENST00000592533 MYPNQ86TC9 1320 aa12.39□□□□□ -0.43
ZNF540-210ENST00000592533 TNS1Q9HBL0 1735 aaKnown RBP12.39□□□□□ -0.43
ZNF540-210ENST00000592533 FAM170AA1A519 330 aa12.39□□□□□ -0.43
ZNF540-210ENST00000592533 CYP1A1P04798 512 aaPredicted RBP12.39□□□□□ -0.43
ZNF540-210ENST00000592533 MAPK4P31152 587 aa12.39□□□□□ -0.43
ZNF540-210ENST00000592533 ABCD1P33897 745 aa12.39□□□□□ -0.43
ZNF540-210ENST00000592533 FAM102BQ5T8I3 360 aa12.39□□□□□ -0.43
ZNF540-210ENST00000592533 CHADLQ6NUI6 762 aa12.39□□□□□ -0.43
ZNF540-210ENST00000592533 VSTM1Q6UX27 236 aa12.39□□□□□ -0.43
ZNF540-210ENST00000592533 TRPM8Q7Z2W7 1104 aa12.39□□□□□ -0.43
ZNF540-210ENST00000592533 FAM228AQ86W67 206 aa12.39□□□□□ -0.43
ZNF540-210ENST00000592533 DDX23Q9BUQ8 820 aaKnown RBP12.39□□□□□ -0.43
ZNF540-210ENST00000592533 TRAIPQ9BWF2 469 aa12.39□□□□□ -0.43
ZNF540-210ENST00000592533 ANAPC7Q9UJX3 599 aa12.39□□□□□ -0.43
ZNF540-210ENST00000592533 DENND3A2RUS2 1198 aa12.39□□□□□ -0.43
ZNF540-210ENST00000592533 TMEM150BA6NC51 233 aa12.39□□□□□ -0.43
ZNF540-210ENST00000592533 CFAP73A6NFT4 308 aa12.39□□□□□ -0.43
ZNF540-210ENST00000592533 RIPK1Q13546 671 aa12.39□□□□□ -0.43
ZNF540-210ENST00000592533 XKR9Q5GH70 373 aa12.39□□□□□ -0.43
ZNF540-210ENST00000592533 ANO5Q75V66 913 aa12.39□□□□□ -0.43
ZNF540-210ENST00000592533 CD248Q9HCU0 757 aa12.39□□□□□ -0.43
ZNF540-210ENST00000592533 PDLIM7Q9NR12 457 aa12.39□□□□□ -0.43
ZNF540-210ENST00000592533 SMIM23A6NLE4 172 aa12.38□□□□□ -0.43
ZNF540-210ENST00000592533 PSTPIP1O43586 416 aa12.38□□□□□ -0.43
ZNF540-210ENST00000592533 STBD1O95210 358 aa12.38□□□□□ -0.43
ZNF540-210ENST00000592533 GAS8O95995 478 aa12.38□□□□□ -0.43
ZNF540-210ENST00000592533 SLCO1A2P46721 670 aa12.38□□□□□ -0.43
ZNF540-210ENST00000592533 BRDTQ58F21 947 aaPredicted RBP12.38□□□□□ -0.43
ZNF540-210ENST00000592533 NSMFQ6X4W1 530 aa12.38□□□□□ -0.43
ZNF540-210ENST00000592533 GPD1LQ8N335 351 aa12.38□□□□□ -0.43
ZNF540-210ENST00000592533 C1orf54Q8WWF1 131 aa12.38□□□□□ -0.43
ZNF540-210ENST00000592533 BSNDQ8WZ55 320 aa12.38□□□□□ -0.43
ZNF540-210ENST00000592533 CCDC127Q96BQ5 260 aa12.38□□□□□ -0.43
ZNF540-210ENST00000592533 ZBED3Q96IU2 234 aaPredicted RBP12.38□□□□□ -0.43
ZNF540-210ENST00000592533 POP1Q99575 1024 aaKnown RBP12.38□□□□□ -0.43
ZNF540-210ENST00000592533 TMEM39BQ9GZU3 492 aa12.38□□□□□ -0.43
ZNF540-210ENST00000592533 KMT5AQ9NQR1 393 aa12.38□□□□□ -0.43
ZNF540-210ENST00000592533 TOPORSQ9NS56 1045 aaPredicted RBP12.38□□□□□ -0.43
ZNF540-210ENST00000592533 CHST7Q9NS84 486 aa12.38□□□□□ -0.43
ZNF540-210ENST00000592533 TPX2Q9ULW0 747 aaKnown RBP12.38□□□□□ -0.43
ZNF540-210ENST00000592533 SBDSQ9Y3A5 250 aaKnown RBP eCLIP12.38□□□□□ -0.43
ZNF540-210ENST00000592533 PCDHB2Q9Y5E7 798 aa12.38□□□□□ -0.43
ZNF540-210ENST00000592533 ACTL7BQ9Y614 415 aa12.38□□□□□ -0.43
ZNF540-210ENST00000592533 UMODL1Q5DID0 1318 aa12.38□□□□□ -0.43
ZNF540-210ENST00000592533 ADGRA3Q8IWK6 1321 aa12.38□□□□□ -0.43
ZNF540-210ENST00000592533 DOCK1Q14185 1865 aa12.38□□□□□ -0.43
ZNF540-210ENST00000592533 NFASCO94856 1347 aa12.38□□□□□ -0.43
ZNF540-210ENST00000592533 POTEJP0CG39 1038 aa12.38□□□□□ -0.43
ZNF540-210ENST00000592533 CHRNA5P30532 468 aa12.38□□□□□ -0.43
ZNF540-210ENST00000592533 CHKAP35790 457 aa12.38□□□□□ -0.43
ZNF540-210ENST00000592533 BPIFB4P59827 614 aa12.38□□□□□ -0.43
ZNF540-210ENST00000592533 ELF3P78545 371 aaPredicted RBP12.38□□□□□ -0.43
ZNF540-210ENST00000592533 GALNTL6Q49A17 601 aa12.38□□□□□ -0.43
ZNF540-210ENST00000592533 PLA2G4FQ68DD2 849 aa12.38□□□□□ -0.43
ZNF540-210ENST00000592533 MON1BQ7L1V2 547 aa12.38□□□□□ -0.43
ZNF540-210ENST00000592533 CDAN1Q8IWY9 1227 aa12.38□□□□□ -0.43
ZNF540-210ENST00000592533 BBOF1Q8ND07 529 aa12.38□□□□□ -0.43
ZNF540-210ENST00000592533 ATL2Q8NHH9 583 aa12.38□□□□□ -0.43
ZNF540-210ENST00000592533 ARHGEF2Q92974 986 aaKnown RBP12.38□□□□□ -0.43
ZNF540-210ENST00000592533 HERPUD2Q9BSE4 406 aa12.38□□□□□ -0.43
ZNF540-210ENST00000592533 FOXP3Q9BZS1 431 aa12.38□□□□□ -0.43
ZNF540-210ENST00000592533 KIAA1683Q9H0B3 1180 aa12.38□□□□□ -0.43
ZNF540-210ENST00000592533 EURLQ9NYK6 297 aa12.38□□□□□ -0.43
ZNF540-210ENST00000592533 O00370 1275 aa12.37□□□□□ -0.43
ZNF540-210ENST00000592533 ATP9AO75110 1047 aa12.37□□□□□ -0.43
ZNF540-210ENST00000592533 PROSCO94903 275 aa12.37□□□□□ -0.43
ZNF540-210ENST00000592533 SCP2P22307 547 aa12.37□□□□□ -0.43
ZNF540-210ENST00000592533 MKRN3Q13064 507 aaKnown RBP12.37□□□□□ -0.43
ZNF540-210ENST00000592533 LONRF1Q17RB8 773 aa12.37□□□□□ -0.43
ZNF540-210ENST00000592533 LARGE2Q8N3Y3 721 aa12.37□□□□□ -0.43
ZNF540-210ENST00000592533 CKAP2Q8WWK9 683 aa12.37□□□□□ -0.43
ZNF540-210ENST00000592533 FAM212AQ96EL1 285 aa12.37□□□□□ -0.43
ZNF540-210ENST00000592533 TAAR1Q96RJ0 339 aa12.37□□□□□ -0.43
ZNF540-210ENST00000592533 ELAC2Q9BQ52 826 aaKnown RBP12.37□□□□□ -0.43
ZNF540-210ENST00000592533 PLCD4Q9BRC7 762 aa12.37□□□□□ -0.43
ZNF540-210ENST00000592533 PDCD2LQ9BRP1 358 aa12.37□□□□□ -0.43
ZNF540-210ENST00000592533 MOV10L1Q9BXT6 1211 aaKnown RBP12.37□□□□□ -0.43
ZNF540-210ENST00000592533 PXMP2Q9NR77 195 aa12.37□□□□□ -0.43
ZNF540-210ENST00000592533 GINM1Q9NU53 330 aa12.37□□□□□ -0.43
ZNF540-210ENST00000592533 ASIC3Q9UHC3 531 aa12.37□□□□□ -0.43
ZNF540-210ENST00000592533 TMEM120BA0PK00 339 aa12.37□□□□□ -0.43
ZNF540-210ENST00000592533 SLC8A1P32418 973 aa12.37□□□□□ -0.43
ZNF540-210ENST00000592533 ITGA8P53708 1063 aa12.37□□□□□ -0.43
ZNF540-210ENST00000592533 RPS6P62753 249 aaKnown RBP12.37□□□□□ -0.43
ZNF540-210ENST00000592533 CCNG2Q16589 344 aa12.37□□□□□ -0.43
ZNF540-210ENST00000592533 MSL1Q68DK7 614 aa12.37□□□□□ -0.43
ZNF540-210ENST00000592533 TRIM72Q6ZMU5 477 aa12.37□□□□□ -0.43
ZNF540-210ENST00000592533 KATNAL2Q8IYT4 538 aa12.37□□□□□ -0.43
ZNF540-210ENST00000592533 OGFOD1Q8N543 542 aa12.37□□□□□ -0.43
ZNF540-210ENST00000592533 GBP7Q8N8V2 638 aaPredicted RBP12.37□□□□□ -0.43
ZNF540-210ENST00000592533 UHMK1Q8TAS1 419 aaKnown RBP12.37□□□□□ -0.43
ZNF540-210ENST00000592533 VCPIP1Q96JH7 1222 aa12.37□□□□□ -0.43
ZNF540-210ENST00000592533 ZNF341Q9BYN7 854 aa12.37□□□□□ -0.43
ZNF540-210ENST00000592533 KIAA1586Q9HCI6 787 aa12.37□□□□□ -0.43
ZNF540-210ENST00000592533 ZNF219Q9P2Y4 722 aaPredicted RBP12.37□□□□□ -0.43
ZNF540-210ENST00000592533 USP15Q9Y4E8 981 aaPredicted RBP12.37□□□□□ -0.43
ZNF540-210ENST00000592533 GJB6O95452 261 aa12.37□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 34.1 ms