RNA–Protein interactions for RNA: ENST00000591877.1

VMP1-213, Transcript of vacuole membrane protein 1, humanhuman

TSL 3

Gene VMP1, Length 791 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VMP1-213ENST00000591877 JMJD4Q9H9V9 463 aa8.68□□□□□ -1.02
VMP1-213ENST00000591877 VAT1LQ9HCJ6 419 aa8.68□□□□□ -1.02
VMP1-213ENST00000591877 PRR13Q9NZ81 148 aa8.68□□□□□ -1.02
VMP1-213ENST00000591877 COL20A1Q9P218 1284 aa8.68□□□□□ -1.02
VMP1-213ENST00000591877 ADD3Q9UEY8 706 aaKnown RBP8.68□□□□□ -1.02
VMP1-213ENST00000591877 MAD2L2Q9UI95 211 aa8.68□□□□□ -1.02
VMP1-213ENST00000591877 TBX21Q9UL17 535 aa8.68□□□□□ -1.02
VMP1-213ENST00000591877 PNMA2Q9UL42 364 aa8.68□□□□□ -1.02
VMP1-213ENST00000591877 MAPRE3Q9UPY8 281 aa8.68□□□□□ -1.02
VMP1-213ENST00000591877 ACTL7BQ9Y614 415 aa8.68□□□□□ -1.02
VMP1-213ENST00000591877 MYH7BA7E2Y1 1941 aa8.68□□□□□ -1.02
VMP1-213ENST00000591877 A0A087X0B3 334 aa8.67□□□□□ -1.02
VMP1-213ENST00000591877 LOC102724159A0A0B4J2E5 919 aa8.67□□□□□ -1.02
VMP1-213ENST00000591877 A0A0U1RQG5 324 aaPredicted RBP8.67□□□□□ -1.02
VMP1-213ENST00000591877 ARVCFO00192 962 aa8.67□□□□□ -1.02
VMP1-213ENST00000591877 ABCB11O95342 1321 aa8.67□□□□□ -1.02
VMP1-213ENST00000591877 ITGAVP06756 1048 aa8.67□□□□□ -1.02
VMP1-213ENST00000591877 PARP1P09874 1014 aaKnown RBP8.67□□□□□ -1.02
VMP1-213ENST00000591877 PWP2Q15269 919 aaKnown RBP8.67□□□□□ -1.02
VMP1-213ENST00000591877 FSCN1Q16658 493 aaKnown RBP8.67□□□□□ -1.02
VMP1-213ENST00000591877 DUSP28Q4G0W2 176 aa8.67□□□□□ -1.02
VMP1-213ENST00000591877 CDPF1Q6NVV7 123 aa8.67□□□□□ -1.02
VMP1-213ENST00000591877 POMZP3Q6PJE2 187 aa8.67□□□□□ -1.02
VMP1-213ENST00000591877 NOL8Q76FK4 1167 aaKnown RBP8.67□□□□□ -1.02
VMP1-213ENST00000591877 CHST3Q7LGC8 479 aa8.67□□□□□ -1.02
VMP1-213ENST00000591877 UBE3DQ7Z6J8 389 aa8.67□□□□□ -1.02
VMP1-213ENST00000591877 PHF6Q8IWS0 365 aaKnown RBP eCLIP8.67□□□□□ -1.02
VMP1-213ENST00000591877 FAM126BQ8IXS8 530 aa8.67□□□□□ -1.02
VMP1-213ENST00000591877 BVESQ8NE79 360 aa8.67□□□□□ -1.02
VMP1-213ENST00000591877 DNAJB8Q8NHS0 232 aa8.67□□□□□ -1.02
VMP1-213ENST00000591877 SYTL5Q8TDW5 730 aaPredicted RBP8.67□□□□□ -1.02
VMP1-213ENST00000591877 MTMR8Q96EF0 704 aa8.67□□□□□ -1.02
VMP1-213ENST00000591877 TAAR1Q96RJ0 339 aa8.67□□□□□ -1.02
VMP1-213ENST00000591877 ASPNQ9BXN1 380 aa8.67□□□□□ -1.02
VMP1-213ENST00000591877 WDR11Q9BZH6 1224 aa8.67□□□□□ -1.02
VMP1-213ENST00000591877 LSG1Q9H089 658 aaKnown RBP8.67□□□□□ -1.02
VMP1-213ENST00000591877 SSU72Q9NP77 194 aaKnown RBP8.67□□□□□ -1.02
VMP1-213ENST00000591877 CEP131Q9UPN4 1083 aa8.67□□□□□ -1.02
VMP1-213ENST00000591877 Q9Y3F1 56 aa8.67□□□□□ -1.02
VMP1-213ENST00000591877 RBM8AQ9Y5S9 174 aaKnown RBP8.67□□□□□ -1.02
VMP1-213ENST00000591877 SCN10AQ9Y5Y9 1956 aa8.67□□□□□ -1.02
VMP1-213ENST00000591877 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP8.67□□□□□ -1.02
VMP1-213ENST00000591877 FAM170BA6NMN3 283 aa8.66□□□□□ -1.02
VMP1-213ENST00000591877 KRTAP9-7A8MTY7 169 aa8.66□□□□□ -1.02
VMP1-213ENST00000591877 KLRF2D3W0D1 207 aa8.66□□□□□ -1.02
VMP1-213ENST00000591877 CYTH3O43739 400 aa8.66□□□□□ -1.02
VMP1-213ENST00000591877 RNGTTO60942 597 aaKnown RBP8.66□□□□□ -1.02
VMP1-213ENST00000591877 ARIH2O95376 493 aa8.66□□□□□ -1.02
VMP1-213ENST00000591877 TIMP1P01033 207 aa8.66□□□□□ -1.02
VMP1-213ENST00000591877 CD4P01730 458 aa8.66□□□□□ -1.02
VMP1-213ENST00000591877 PDGFRBP09619 1106 aa8.66□□□□□ -1.02
VMP1-213ENST00000591877 MYCLP1P12525 358 aaPredicted RBP8.66□□□□□ -1.02
VMP1-213ENST00000591877 CD247P20963 164 aa8.66□□□□□ -1.02
VMP1-213ENST00000591877 USP11P51784 963 aa8.66□□□□□ -1.02
VMP1-213ENST00000591877 PSMC6P62333 389 aa8.66□□□□□ -1.02
VMP1-213ENST00000591877 TROAPQ12815 778 aa8.66□□□□□ -1.02
VMP1-213ENST00000591877 MAP7Q14244 749 aa8.66□□□□□ -1.02
VMP1-213ENST00000591877 GRM4Q14833 912 aa8.66□□□□□ -1.02
VMP1-213ENST00000591877 TRIM61Q5EBN2 209 aa8.66□□□□□ -1.02
VMP1-213ENST00000591877 FAM209AQ5JX71 171 aa8.66□□□□□ -1.02
VMP1-213ENST00000591877 CCDC181Q5TID7 509 aa8.66□□□□□ -1.02
VMP1-213ENST00000591877 C16orf59Q7L2K0 433 aa8.66□□□□□ -1.02
VMP1-213ENST00000591877 MB21D2Q8IYB1 491 aaPredicted RBP8.66□□□□□ -1.02
VMP1-213ENST00000591877 DEFB123Q8N688 67 aa8.66□□□□□ -1.02
VMP1-213ENST00000591877 LRRN4CLQ8ND94 238 aa8.66□□□□□ -1.02
VMP1-213ENST00000591877 DNERQ8NFT8 737 aa8.66□□□□□ -1.02
VMP1-213ENST00000591877 IGDCC4Q8TDY8 1250 aa8.66□□□□□ -1.02
VMP1-213ENST00000591877 COPS5Q92905 334 aa8.66□□□□□ -1.02
VMP1-213ENST00000591877 VWCEQ96DN2 955 aa8.66□□□□□ -1.02
VMP1-213ENST00000591877 MKRN2Q9H000 416 aaKnown RBP8.66□□□□□ -1.02
VMP1-213ENST00000591877 AP5M1Q9H0R1 490 aa8.66□□□□□ -1.02
VMP1-213ENST00000591877 FAM105AQ9NUU6 356 aa8.66□□□□□ -1.02
VMP1-213ENST00000591877 MTMR10Q9NXD2 777 aa8.66□□□□□ -1.02
VMP1-213ENST00000591877 MAGEC2Q9UBF1 373 aaPredicted RBP8.66□□□□□ -1.02
VMP1-213ENST00000591877 APEX2Q9UBZ4 518 aa8.66□□□□□ -1.02
VMP1-213ENST00000591877 ATP8A1Q9Y2Q0 1164 aa8.66□□□□□ -1.02
VMP1-213ENST00000591877 COL6A3P12111 3177 aa8.66□□□□□ -1.02
VMP1-213ENST00000591877 GBF1Q92538 1859 aa8.66□□□□□ -1.02
VMP1-213ENST00000591877 SCN5AQ14524 2016 aa8.65□□□□□ -1.02
VMP1-213ENST00000591877 UMODL1Q5DID0 1318 aa8.65□□□□□ -1.02
VMP1-213ENST00000591877 NOP56O00567 594 aaKnown RBP8.65□□□□□ -1.02
VMP1-213ENST00000591877 IFIT3O14879 490 aaKnown RBP8.65□□□□□ -1.02
VMP1-213ENST00000591877 CABYRO75952 493 aa8.65□□□□□ -1.02
VMP1-213ENST00000591877 PABPC1P11940 636 aaKnown RBP8.65□□□□□ -1.02
VMP1-213ENST00000591877 ITGA4P13612 1032 aa8.65□□□□□ -1.02
VMP1-213ENST00000591877 DRD2P14416 443 aa8.65□□□□□ -1.02
VMP1-213ENST00000591877 L1CAMP32004 1257 aa8.65□□□□□ -1.02
VMP1-213ENST00000591877 ETV3P41162 512 aa8.65□□□□□ -1.02
VMP1-213ENST00000591877 GHRHRQ02643 423 aa8.65□□□□□ -1.02
VMP1-213ENST00000591877 FPGSQ05932 587 aa8.65□□□□□ -1.02
VMP1-213ENST00000591877 TRDNQ13061 729 aa8.65□□□□□ -1.02
VMP1-213ENST00000591877 ITGA7Q13683 1181 aa8.65□□□□□ -1.02
VMP1-213ENST00000591877 MFSD5Q6N075 450 aa8.65□□□□□ -1.02
VMP1-213ENST00000591877 CCDC62Q6P9F0 684 aa8.65□□□□□ -1.02
VMP1-213ENST00000591877 DHX37Q8IY37 1157 aaKnown RBP8.65□□□□□ -1.02
VMP1-213ENST00000591877 NCOA7Q8NI08 942 aa8.65□□□□□ -1.02
VMP1-213ENST00000591877 MRGPRX3Q96LB0 322 aa8.65□□□□□ -1.02
VMP1-213ENST00000591877 KREMEN1Q96MU8 473 aa8.65□□□□□ -1.02
VMP1-213ENST00000591877 MAF1Q9H063 256 aa8.65□□□□□ -1.02
VMP1-213ENST00000591877 ACSS3Q9H6R3 686 aa8.65□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 23.6 ms