RNA–Protein interactions for RNA: ENST00000591849.5

BRCA1-227, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 1 (best) BASIC

Gene BRCA1, Length 563 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-227ENST00000591849 KCNN1Q92952 543 aa10.97□□□□□ -0.65
BRCA1-227ENST00000591849 PPP1R10Q96QC0 940 aaKnown RBP10.97□□□□□ -0.65
BRCA1-227ENST00000591849 FIZ1Q96SL8 496 aa10.97□□□□□ -0.65
BRCA1-227ENST00000591849 PAAF1Q9BRP4 392 aa10.97□□□□□ -0.65
BRCA1-227ENST00000591849 C1QTNF1Q9BXJ1 281 aa10.97□□□□□ -0.65
BRCA1-227ENST00000591849 CXCL16Q9H2A7 254 aa10.97□□□□□ -0.65
BRCA1-227ENST00000591849 EXOC1Q9NV70 894 aa10.97□□□□□ -0.65
BRCA1-227ENST00000591849 BARX2Q9UMQ3 279 aaPredicted RBP10.97□□□□□ -0.65
BRCA1-227ENST00000591849 NUB1Q9Y5A7 615 aa10.97□□□□□ -0.65
BRCA1-227ENST00000591849 MYO7AQ13402 2215 aa10.97□□□□□ -0.65
BRCA1-227ENST00000591849 PVALEFA0A1B0GWK0 134 aa10.96□□□□□ -0.65
BRCA1-227ENST00000591849 A0A1W2PQ27 194 aa10.96□□□□□ -0.65
BRCA1-227ENST00000591849 A0A1W2PQ64 194 aa10.96□□□□□ -0.65
BRCA1-227ENST00000591849 A0A1W2PQD8 194 aa10.96□□□□□ -0.65
BRCA1-227ENST00000591849 FRMD3A2A2Y4 597 aa10.96□□□□□ -0.65
BRCA1-227ENST00000591849 LACTBL1A8MY62 500 aa10.96□□□□□ -0.65
BRCA1-227ENST00000591849 F8W810 466 aa10.96□□□□□ -0.65
BRCA1-227ENST00000591849 PODXLO00592 558 aa10.96□□□□□ -0.65
BRCA1-227ENST00000591849 KIF4AO95239 1232 aa10.96□□□□□ -0.65
BRCA1-227ENST00000591849 LDHAP00338 332 aaKnown RBP10.96□□□□□ -0.65
BRCA1-227ENST00000591849 ADH1AP07327 375 aa10.96□□□□□ -0.65
BRCA1-227ENST00000591849 KCNE1P15382 129 aa10.96□□□□□ -0.65
BRCA1-227ENST00000591849 COL9A1P20849 921 aa10.96□□□□□ -0.65
BRCA1-227ENST00000591849 CASP1P29466 404 aa10.96□□□□□ -0.65
BRCA1-227ENST00000591849 RPL9P32969 192 aaKnown RBP10.96□□□□□ -0.65
BRCA1-227ENST00000591849 TNFSF9P41273 254 aa10.96□□□□□ -0.65
BRCA1-227ENST00000591849 CLCNKBP51801 687 aa10.96□□□□□ -0.65
BRCA1-227ENST00000591849 NDUFA8P51970 172 aa10.96□□□□□ -0.65
BRCA1-227ENST00000591849 CREMQ03060 361 aa10.96□□□□□ -0.65
BRCA1-227ENST00000591849 SPAG1Q07617 926 aa10.96□□□□□ -0.65
BRCA1-227ENST00000591849 DLX2Q07687 328 aaPredicted RBP10.96□□□□□ -0.65
BRCA1-227ENST00000591849 CUL4BQ13620 913 aa10.96□□□□□ -0.65
BRCA1-227ENST00000591849 ANKRD54Q6NXT1 300 aa10.96□□□□□ -0.65
BRCA1-227ENST00000591849 ARMCX5Q6P1M9 558 aa10.96□□□□□ -0.65
BRCA1-227ENST00000591849 ALKAL1Q6UXT8 129 aa10.96□□□□□ -0.65
BRCA1-227ENST00000591849 GRAMD1CQ8IYS0 662 aa10.96□□□□□ -0.65
BRCA1-227ENST00000591849 BEST2Q8NFU1 509 aa10.96□□□□□ -0.65
BRCA1-227ENST00000591849 GADD45GIP1Q8TAE8 222 aaPredicted RBP10.96□□□□□ -0.65
BRCA1-227ENST00000591849 PAGE5Q96GU1 130 aa10.96□□□□□ -0.65
BRCA1-227ENST00000591849 KLHL5Q96PQ7 755 aa10.96□□□□□ -0.65
BRCA1-227ENST00000591849 TSPAN18Q96SJ8 248 aa10.96□□□□□ -0.65
BRCA1-227ENST00000591849 TTPALQ9BTX7 342 aa10.96□□□□□ -0.65
BRCA1-227ENST00000591849 APOL5Q9BWW9 433 aa10.96□□□□□ -0.65
BRCA1-227ENST00000591849 VN1R3Q9BXE9 311 aa10.96□□□□□ -0.65
BRCA1-227ENST00000591849 GPR62Q9BZJ7 368 aa10.96□□□□□ -0.65
BRCA1-227ENST00000591849 PCIF1Q9H4Z3 704 aa10.96□□□□□ -0.65
BRCA1-227ENST00000591849 GOLGA2P5Q9HBQ8 144 aa10.96□□□□□ -0.65
BRCA1-227ENST00000591849 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP10.96□□□□□ -0.65
BRCA1-227ENST00000591849 CNTN3Q9P232 1028 aa10.96□□□□□ -0.65
BRCA1-227ENST00000591849 DPP7Q9UHL4 492 aa10.96□□□□□ -0.65
BRCA1-227ENST00000591849 UBQLN1Q9UMX0 589 aaKnown RBP10.96□□□□□ -0.65
BRCA1-227ENST00000591849 GTF3C5Q9Y5Q8 519 aaPredicted RBP10.96□□□□□ -0.65
BRCA1-227ENST00000591849 IRAK3Q9Y616 596 aa10.96□□□□□ -0.65
BRCA1-227ENST00000591849 GRXCR2A6NFK2 248 aa10.95□□□□□ -0.66
BRCA1-227ENST00000591849 TISP43B9A030 160 aa10.95□□□□□ -0.66
BRCA1-227ENST00000591849 TBX10O75333 385 aa10.95□□□□□ -0.66
BRCA1-227ENST00000591849 CNPP09543 421 aaKnown RBP10.95□□□□□ -0.66
BRCA1-227ENST00000591849 HOXB8P17481 243 aaPredicted RBP10.95□□□□□ -0.66
BRCA1-227ENST00000591849 SSTR3P32745 418 aaPredicted RBP10.95□□□□□ -0.66
BRCA1-227ENST00000591849 LTBRP36941 435 aa10.95□□□□□ -0.66
BRCA1-227ENST00000591849 CASP5P51878 434 aa10.95□□□□□ -0.66
BRCA1-227ENST00000591849 RBM10P98175 930 aaKnown RBP10.95□□□□□ -0.66
BRCA1-227ENST00000591849 DSG1Q02413 1049 aa10.95□□□□□ -0.66
BRCA1-227ENST00000591849 KCNA1Q09470 495 aa10.95□□□□□ -0.66
BRCA1-227ENST00000591849 SMAD4Q13485 552 aaKnown RBP10.95□□□□□ -0.66
BRCA1-227ENST00000591849 COL19A1Q14993 1142 aa10.95□□□□□ -0.66
BRCA1-227ENST00000591849 ENOX2Q16206 610 aaKnown RBP10.95□□□□□ -0.66
BRCA1-227ENST00000591849 XKR4Q5GH76 650 aa10.95□□□□□ -0.66
BRCA1-227ENST00000591849 KIAA0319Q5VV43 1072 aa10.95□□□□□ -0.66
BRCA1-227ENST00000591849 CES5AQ6NT32 575 aa10.95□□□□□ -0.66
BRCA1-227ENST00000591849 KANK3Q6NY19 840 aa10.95□□□□□ -0.66
BRCA1-227ENST00000591849 CNNM4Q6P4Q7 775 aa10.95□□□□□ -0.66
BRCA1-227ENST00000591849 SLC39A4Q6P5W5 647 aa10.95□□□□□ -0.66
BRCA1-227ENST00000591849 PDXDC1Q6P996 788 aa10.95□□□□□ -0.66
BRCA1-227ENST00000591849 HS2ST1Q7LGA3 356 aa10.95□□□□□ -0.66
BRCA1-227ENST00000591849 GLYCTKQ8IVS8 523 aa10.95□□□□□ -0.66
BRCA1-227ENST00000591849 HPS3Q969F9 1004 aa10.95□□□□□ -0.66
BRCA1-227ENST00000591849 C18orf25Q96B23 403 aaPredicted RBP10.95□□□□□ -0.66
BRCA1-227ENST00000591849 B3GALT6Q96L58 329 aa10.95□□□□□ -0.66
BRCA1-227ENST00000591849 ZMAT2Q96NC0 199 aaKnown RBP10.95□□□□□ -0.66
BRCA1-227ENST00000591849 FAM213AQ9BRX8 229 aa10.95□□□□□ -0.66
BRCA1-227ENST00000591849 HAPLN2Q9GZV7 340 aa10.95□□□□□ -0.66
BRCA1-227ENST00000591849 SLC39A2Q9NP94 309 aa10.95□□□□□ -0.66
BRCA1-227ENST00000591849 DZANK1Q9NVP4 752 aa10.95□□□□□ -0.66
BRCA1-227ENST00000591849 CIZ1Q9ULV3 898 aaPredicted RBP10.95□□□□□ -0.66
BRCA1-227ENST00000591849 R3HCC1Q9Y3T6 440 aaKnown RBP10.95□□□□□ -0.66
BRCA1-227ENST00000591849 HCFC2Q9Y5Z7 792 aa10.95□□□□□ -0.66
BRCA1-227ENST00000591849 ATG2AQ2TAZ0 1938 aa10.94□□□□□ -0.66
BRCA1-227ENST00000591849 TTC26A0AVF1 554 aa10.94□□□□□ -0.66
BRCA1-227ENST00000591849 GOLGA8IPA6NC78 632 aa10.94□□□□□ -0.66
BRCA1-227ENST00000591849 GOLGA8JA6NMD2 632 aa10.94□□□□□ -0.66
BRCA1-227ENST00000591849 EIF3DO15371 548 aaKnown RBP eCLIP10.94□□□□□ -0.66
BRCA1-227ENST00000591849 TEX28O15482 410 aa10.94□□□□□ -0.66
BRCA1-227ENST00000591849 MBTPS2O43462 519 aa10.94□□□□□ -0.66
BRCA1-227ENST00000591849 ACTN4O43707 911 aaKnown RBP10.94□□□□□ -0.66
BRCA1-227ENST00000591849 PPP1R37O75864 691 aa10.94□□□□□ -0.66
BRCA1-227ENST00000591849 ZNF202O95125 648 aa10.94□□□□□ -0.66
BRCA1-227ENST00000591849 GLUD1P00367 558 aa10.94□□□□□ -0.66
BRCA1-227ENST00000591849 MYL1P05976 194 aa10.94□□□□□ -0.66
BRCA1-227ENST00000591849 EPCAMP16422 314 aa10.94□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 21.2 ms