RNA–Protein interactions for RNA: ENST00000591545.5

SMARCA4-216, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 4, humanhuman

TSL 2

Gene SMARCA4, Length 5,193 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA4-216ENST00000591545 KRT7P08729 469 aa14.07□□□□□ -0.16
SMARCA4-216ENST00000591545 ARHGDIAP52565 204 aa14.07□□□□□ -0.16
SMARCA4-216ENST00000591545 LLGL1Q15334 1064 aa14.07□□□□□ -0.16
SMARCA4-216ENST00000591545 STOX1Q6ZVD7 989 aa14.07□□□□□ -0.16
SMARCA4-216ENST00000591545 ABTB1Q969K4 478 aaPredicted RBP14.07□□□□□ -0.16
SMARCA4-216ENST00000591545 TAAR1Q96RJ0 339 aa14.07□□□□□ -0.16
SMARCA4-216ENST00000591545 TRPV6Q9H1D0 765 aa14.07□□□□□ -0.16
SMARCA4-216ENST00000591545 MYO5BQ9ULV0 1848 aa14.06□□□□□ -0.16
SMARCA4-216ENST00000591545 ZNF564Q8TBZ8 553 aaPredicted RBP14.06□□□□□ -0.16
SMARCA4-216ENST00000591545 YY1AP1Q9H869 796 aa14.06□□□□□ -0.16
SMARCA4-216ENST00000591545 IP6K2Q9UHH9 426 aa14.06□□□□□ -0.16
SMARCA4-216ENST00000591545 FIS1Q9Y3D6 152 aa14.06□□□□□ -0.16
SMARCA4-216ENST00000591545 SNX9Q9Y5X1 595 aa14.06□□□□□ -0.16
SMARCA4-216ENST00000591545 CREB3O43889 395 aa14.06□□□□□ -0.16
SMARCA4-216ENST00000591545 KPNA6O60684 536 aa14.06□□□□□ -0.16
SMARCA4-216ENST00000591545 NFIAQ12857 509 aa14.06□□□□□ -0.16
SMARCA4-216ENST00000591545 SYDE1Q6ZW31 735 aaPredicted RBP14.06□□□□□ -0.16
SMARCA4-216ENST00000591545 ANO5Q75V66 913 aa14.06□□□□□ -0.16
SMARCA4-216ENST00000591545 DHX40Q8IX18 779 aaKnown RBP14.06□□□□□ -0.16
SMARCA4-216ENST00000591545 ATP11CQ8NB49 1132 aa14.06□□□□□ -0.16
SMARCA4-216ENST00000591545 SH3TC2Q8TF17 1288 aa14.06□□□□□ -0.16
SMARCA4-216ENST00000591545 SNF8Q96H20 258 aa14.06□□□□□ -0.16
SMARCA4-216ENST00000591545 PHF20Q9BVI0 1012 aa14.06□□□□□ -0.16
SMARCA4-216ENST00000591545 FSD1LQ9BXM9 530 aa14.06□□□□□ -0.16
SMARCA4-216ENST00000591545 MAGEB5Q9BZ81 275 aa14.06□□□□□ -0.16
SMARCA4-216ENST00000591545 REREQ9P2R6 1566 aa14.06□□□□□ -0.16
SMARCA4-216ENST00000591545 HOXA2O43364 376 aa14.06□□□□□ -0.16
SMARCA4-216ENST00000591545 CCDC22O60826 627 aa14.06□□□□□ -0.16
SMARCA4-216ENST00000591545 SCP2P22307 547 aa14.06□□□□□ -0.16
SMARCA4-216ENST00000591545 OR1G1P47890 313 aa14.06□□□□□ -0.16
SMARCA4-216ENST00000591545 COPS2P61201 443 aa14.06□□□□□ -0.16
SMARCA4-216ENST00000591545 ST8SIA6P61647 398 aa14.06□□□□□ -0.16
SMARCA4-216ENST00000591545 TMED1Q13445 227 aa14.06□□□□□ -0.16
SMARCA4-216ENST00000591545 NOTUMQ6P988 496 aa14.06□□□□□ -0.16
SMARCA4-216ENST00000591545 ACER1Q8TDN7 264 aa14.06□□□□□ -0.16
SMARCA4-216ENST00000591545 RFFLQ8WZ73 363 aa14.06□□□□□ -0.16
SMARCA4-216ENST00000591545 TMEM169Q96HH4 297 aa14.06□□□□□ -0.16
SMARCA4-216ENST00000591545 SP110Q9HB58 689 aa14.06□□□□□ -0.16
SMARCA4-216ENST00000591545 ANKEF1Q9NU02 776 aa14.06□□□□□ -0.16
SMARCA4-216ENST00000591545 ARHGAP10A1A4S6 786 aa14.06□□□□□ -0.16
SMARCA4-216ENST00000591545 PPP1R12AO14974 1030 aaPredicted RBP14.06□□□□□ -0.16
SMARCA4-216ENST00000591545 SRGAP2O75044 1071 aa14.06□□□□□ -0.16
SMARCA4-216ENST00000591545 BRAFP15056 766 aa14.06□□□□□ -0.16
SMARCA4-216ENST00000591545 PCSK1P29120 753 aa14.06□□□□□ -0.16
SMARCA4-216ENST00000591545 THPOP40225 353 aa14.06□□□□□ -0.16
SMARCA4-216ENST00000591545 ARFIP2P53365 341 aa14.06□□□□□ -0.16
SMARCA4-216ENST00000591545 TAP1Q03518 808 aa14.06□□□□□ -0.16
SMARCA4-216ENST00000591545 CCDC144BQ3MJ40 725 aa14.06□□□□□ -0.16
SMARCA4-216ENST00000591545 ASIC4Q96FT7 647 aa14.06□□□□□ -0.16
SMARCA4-216ENST00000591545 EIF2AK3Q9NZJ5 1116 aaKnown RBP14.06□□□□□ -0.16
SMARCA4-216ENST00000591545 INTUQ9ULD6 942 aa14.06□□□□□ -0.16
SMARCA4-216ENST00000591545 CAPN11Q9UMQ6 739 aa14.06□□□□□ -0.16
SMARCA4-216ENST00000591545 ZDHHC9Q9Y397 364 aa14.06□□□□□ -0.16
SMARCA4-216ENST00000591545 EMSYQ7Z589 1322 aa14.05□□□□□ -0.16
SMARCA4-216ENST00000591545 TRIM49BA6NDI0 452 aa14.05□□□□□ -0.16
SMARCA4-216ENST00000591545 IL18RAPO95256 599 aa14.05□□□□□ -0.16
SMARCA4-216ENST00000591545 IFNA8P32881 189 aa14.05□□□□□ -0.16
SMARCA4-216ENST00000591545 YWHAHQ04917 246 aaPredicted RBP14.05□□□□□ -0.16
SMARCA4-216ENST00000591545 C1orf146Q5VVC0 180 aa14.05□□□□□ -0.16
SMARCA4-216ENST00000591545 TRPC7Q9HCX4 862 aa14.05□□□□□ -0.16
SMARCA4-216ENST00000591545 FBXO28Q9NVF7 368 aa14.05□□□□□ -0.16
SMARCA4-216ENST00000591545 SIGLEC1Q9BZZ2 1709 aa14.05□□□□□ -0.16
SMARCA4-216ENST00000591545 IL1R1P14778 569 aa14.05□□□□□ -0.16
SMARCA4-216ENST00000591545 NMT1P30419 496 aaKnown RBP14.05□□□□□ -0.16
SMARCA4-216ENST00000591545 GFPT1Q06210 699 aaPredicted RBP14.05□□□□□ -0.16
SMARCA4-216ENST00000591545 CYTH2Q99418 400 aa14.05□□□□□ -0.16
SMARCA4-216ENST00000591545 KCNH7Q9NS40 1196 aa14.05□□□□□ -0.16
SMARCA4-216ENST00000591545 GTF3C5Q9Y5Q8 519 aaPredicted RBP14.05□□□□□ -0.16
SMARCA4-216ENST00000591545 TCF7P36402 384 aaPredicted RBP14.05□□□□□ -0.16
SMARCA4-216ENST00000591545 SERPINB4P48594 390 aa14.05□□□□□ -0.16
SMARCA4-216ENST00000591545 ALDH7A1P49419 539 aaKnown RBP14.05□□□□□ -0.16
SMARCA4-216ENST00000591545 SLC12A1Q13621 1099 aa14.05□□□□□ -0.16
SMARCA4-216ENST00000591545 KIF19Q2TAC6 998 aa14.05□□□□□ -0.16
SMARCA4-216ENST00000591545 PARP9Q8IXQ6 854 aa14.05□□□□□ -0.16
SMARCA4-216ENST00000591545 GLIS2Q9BZE0 524 aaPredicted RBP14.05□□□□□ -0.16
SMARCA4-216ENST00000591545 STARD7Q9NQZ5 370 aa14.05□□□□□ -0.16
SMARCA4-216ENST00000591545 L3MBTL1Q9Y468 752 aa14.05□□□□□ -0.16
SMARCA4-216ENST00000591545 COL5A2P05997 1499 aaPredicted RBP14.05□□□□□ -0.16
SMARCA4-216ENST00000591545 GPR182O15218 404 aa14.05□□□□□ -0.16
SMARCA4-216ENST00000591545 GUCY1A2P33402 732 aa14.05□□□□□ -0.16
SMARCA4-216ENST00000591545 HP1BP3Q5SSJ5 553 aaPredicted RBP14.05□□□□□ -0.16
SMARCA4-216ENST00000591545 ATF7IP2Q5U623 682 aa14.05□□□□□ -0.16
SMARCA4-216ENST00000591545 ZNF746Q6NUN9 644 aaPredicted RBP14.05□□□□□ -0.16
SMARCA4-216ENST00000591545 PDXDC1Q6P996 788 aa14.05□□□□□ -0.16
SMARCA4-216ENST00000591545 TTC23LQ6PF05 361 aa14.05□□□□□ -0.16
SMARCA4-216ENST00000591545 FAM47EQ6ZV65 393 aa14.05□□□□□ -0.16
SMARCA4-216ENST00000591545 TRMT10CQ7L0Y3 403 aaKnown RBP14.05□□□□□ -0.16
SMARCA4-216ENST00000591545 RHOT1Q8IXI2 618 aa14.05□□□□□ -0.16
SMARCA4-216ENST00000591545 STKLD1Q8NE28 680 aa14.05□□□□□ -0.16
SMARCA4-216ENST00000591545 TGS1Q96RS0 853 aaKnown RBP14.05□□□□□ -0.16
SMARCA4-216ENST00000591545 COLEC11Q9BWP8 271 aa14.05□□□□□ -0.16
SMARCA4-216ENST00000591545 DNAJC17Q9NVM6 304 aaKnown RBP14.05□□□□□ -0.16
SMARCA4-216ENST00000591545 IFT172Q9UG01 1749 aa14.05□□□□□ -0.16
SMARCA4-216ENST00000591545 TTC26A0AVF1 554 aa14.04□□□□□ -0.16
SMARCA4-216ENST00000591545 ATXN8OSP0DMR3 200 aa14.04□□□□□ -0.16
SMARCA4-216ENST00000591545 SV2CQ496J9 727 aa14.04□□□□□ -0.16
SMARCA4-216ENST00000591545 FAM102AQ5T9C2 384 aaPredicted RBP14.04□□□□□ -0.16
SMARCA4-216ENST00000591545 LRIG3Q6UXM1 1119 aa14.04□□□□□ -0.16
SMARCA4-216ENST00000591545 CATSPER1Q8NEC5 780 aa14.04□□□□□ -0.16
SMARCA4-216ENST00000591545 SIK2Q9H0K1 926 aa14.04□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 32.2 ms