RNA–Protein interactions for RNA: ENST00000589417.1

H3F3B-207, Transcript of H3 histone family member 3B, humanhuman

TSL 2

Gene H3F3B, Length 575 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
H3F3B-207ENST00000589417 GLRA4Q5JXX5 417 aa19.15■□□□□ 0.66
H3F3B-207ENST00000589417 CD300LGQ6UXG3 332 aa19.15■□□□□ 0.66
H3F3B-207ENST00000589417 EPM2AIP1Q7L775 607 aaPredicted RBP19.15■□□□□ 0.66
H3F3B-207ENST00000589417 PPFIBP1Q86W92 1011 aa19.15■□□□□ 0.66
H3F3B-207ENST00000589417 CEP57L1Q8IYX8 460 aa19.15■□□□□ 0.66
H3F3B-207ENST00000589417 SMRP1Q8NCR6 262 aa19.15■□□□□ 0.66
H3F3B-207ENST00000589417 SLC22A17Q8WUG5 538 aa19.15■□□□□ 0.66
H3F3B-207ENST00000589417 KLHL5Q96PQ7 755 aa19.15■□□□□ 0.66
H3F3B-207ENST00000589417 MSTO1Q9BUK6 570 aa19.15■□□□□ 0.66
H3F3B-207ENST00000589417 EMILIN2Q9BXX0 1053 aa19.15■□□□□ 0.66
H3F3B-207ENST00000589417 FGFBP2Q9BYJ0 223 aa19.15■□□□□ 0.66
H3F3B-207ENST00000589417 TBC1D7Q9P0N9 293 aa19.15■□□□□ 0.66
H3F3B-207ENST00000589417 SERTAD1Q9UHV2 236 aa19.15■□□□□ 0.66
H3F3B-207ENST00000589417 HCFC2Q9Y5Z7 792 aa19.15■□□□□ 0.66
H3F3B-207ENST00000589417 SF3B1O75533 1304 aaKnown RBP eCLIP19.15■□□□□ 0.664e-7■■■■■ 28.9
H3F3B-207ENST00000589417 EIF3DO15371 548 aaKnown RBP eCLIP19.14■□□□□ 0.65
H3F3B-207ENST00000589417 KIF4AO95239 1232 aa19.14■□□□□ 0.65
H3F3B-207ENST00000589417 URODP06132 367 aa19.14■□□□□ 0.65
H3F3B-207ENST00000589417 SRGAP2BP0DMP2 458 aa19.14■□□□□ 0.65
H3F3B-207ENST00000589417 CXCL8P10145 99 aa19.14■□□□□ 0.65
H3F3B-207ENST00000589417 MYBP10242 640 aa19.14■□□□□ 0.65
H3F3B-207ENST00000589417 HOXB8P17481 243 aaPredicted RBP19.14■□□□□ 0.65
H3F3B-207ENST00000589417 CYP3A5P20815 502 aa19.14■□□□□ 0.65
H3F3B-207ENST00000589417 MATR3P43243 847 aaKnown RBP eCLIP19.14■□□□□ 0.65
H3F3B-207ENST00000589417 GLUD2P49448 558 aa19.14■□□□□ 0.65
H3F3B-207ENST00000589417 NDUFV1P49821 464 aa19.14■□□□□ 0.65
H3F3B-207ENST00000589417 ASIC1P78348 528 aa19.14■□□□□ 0.65
H3F3B-207ENST00000589417 SOX4Q06945 474 aaPredicted RBP19.14■□□□□ 0.65
H3F3B-207ENST00000589417 SMAD4Q13485 552 aaKnown RBP19.14■□□□□ 0.65
H3F3B-207ENST00000589417 ENOX2Q16206 610 aaKnown RBP19.14■□□□□ 0.65
H3F3B-207ENST00000589417 SEZ6Q53EL9 994 aa19.14■□□□□ 0.65
H3F3B-207ENST00000589417 PTCRAQ6ISU1 281 aaPredicted RBP19.14■□□□□ 0.65
H3F3B-207ENST00000589417 STXBP4Q6ZWJ1 553 aa19.14■□□□□ 0.65
H3F3B-207ENST00000589417 ZNF507Q8TCN5 953 aa19.14■□□□□ 0.65
H3F3B-207ENST00000589417 AUTS2Q8WXX7 1259 aa19.14■□□□□ 0.65
H3F3B-207ENST00000589417 CASP10Q92851 521 aa19.14■□□□□ 0.65
H3F3B-207ENST00000589417 PAGE5Q96GU1 130 aa19.14■□□□□ 0.65
H3F3B-207ENST00000589417 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP19.14■□□□□ 0.65
H3F3B-207ENST00000589417 FNIP2Q9P278 1114 aa19.14■□□□□ 0.65
H3F3B-207ENST00000589417 CD207Q9UJ71 328 aa19.14■□□□□ 0.65
H3F3B-207ENST00000589417 FAM50BQ9Y247 325 aa19.14■□□□□ 0.65
H3F3B-207ENST00000589417 B3GAT3O94766 335 aa19.13■□□□□ 0.65
H3F3B-207ENST00000589417 CNPP09543 421 aaKnown RBP19.13■□□□□ 0.65
H3F3B-207ENST00000589417 GARTP22102 1010 aa19.13■□□□□ 0.65
H3F3B-207ENST00000589417 TNFSF9P41273 254 aa19.13■□□□□ 0.65
H3F3B-207ENST00000589417 SYKP43405 635 aa19.13■□□□□ 0.65
H3F3B-207ENST00000589417 CLCNKBP51801 687 aa19.13■□□□□ 0.65
H3F3B-207ENST00000589417 NDUFA8P51970 172 aa19.13■□□□□ 0.65
H3F3B-207ENST00000589417 ZBTB41Q5SVQ8 909 aa19.13■□□□□ 0.65
H3F3B-207ENST00000589417 ANKRD54Q6NXT1 300 aa19.13■□□□□ 0.65
H3F3B-207ENST00000589417 ADAMTS19Q8TE59 1207 aa19.13■□□□□ 0.65
H3F3B-207ENST00000589417 RABGGTAQ92696 567 aa19.13■□□□□ 0.65
H3F3B-207ENST00000589417 S1PR5Q9H228 398 aa19.13■□□□□ 0.65
H3F3B-207ENST00000589417 ASB7Q9H672 318 aa19.13■□□□□ 0.65
H3F3B-207ENST00000589417 RPF1Q9H9Y2 349 aaKnown RBP19.13■□□□□ 0.65
H3F3B-207ENST00000589417 CACNG4Q9UBN1 327 aa19.13■□□□□ 0.65
H3F3B-207ENST00000589417 AGO2Q9UKV8 859 aaKnown RBP19.13■□□□□ 0.65
H3F3B-207ENST00000589417 DERAQ9Y315 318 aa19.13■□□□□ 0.65
H3F3B-207ENST00000589417 LACTBL1A8MY62 500 aa19.12■□□□□ 0.65
H3F3B-207ENST00000589417 TISP43B9A030 160 aa19.12■□□□□ 0.65
H3F3B-207ENST00000589417 KIAA0391O15091 583 aaKnown RBP19.12■□□□□ 0.65
H3F3B-207ENST00000589417 MBTPS2O43462 519 aa19.12■□□□□ 0.65
H3F3B-207ENST00000589417 FGFR3P22607 806 aa19.12■□□□□ 0.65
H3F3B-207ENST00000589417 LRPAP1P30533 357 aa19.12■□□□□ 0.65
H3F3B-207ENST00000589417 HOXD13P35453 343 aa19.12■□□□□ 0.65
H3F3B-207ENST00000589417 SNRPFP62306 86 aaKnown RBP19.12■□□□□ 0.65
H3F3B-207ENST00000589417 CREMQ03060 361 aa19.12■□□□□ 0.65
H3F3B-207ENST00000589417 PPP2R3AQ06190 1150 aa19.12■□□□□ 0.65
H3F3B-207ENST00000589417 CUL4BQ13620 913 aa19.12■□□□□ 0.65
H3F3B-207ENST00000589417 SMAD2Q15796 467 aaKnown RBP19.12■□□□□ 0.65
H3F3B-207ENST00000589417 FAM26FQ5R3K3 315 aa19.12■□□□□ 0.65
H3F3B-207ENST00000589417 CRELD2Q6UXH1 353 aaPredicted RBP19.12■□□□□ 0.65
H3F3B-207ENST00000589417 EP400NLQ6ZTU2 488 aa19.12■□□□□ 0.65
H3F3B-207ENST00000589417 PIK3R5Q8WYR1 880 aa19.12■□□□□ 0.65
H3F3B-207ENST00000589417 IKZF4Q9H2S9 585 aa19.12■□□□□ 0.65
H3F3B-207ENST00000589417 PRKAG3Q9UGI9 489 aa19.12■□□□□ 0.65
H3F3B-207ENST00000589417 BARX2Q9UMQ3 279 aaPredicted RBP19.12■□□□□ 0.65
H3F3B-207ENST00000589417 UBQLN1Q9UMX0 589 aaKnown RBP19.12■□□□□ 0.65
H3F3B-207ENST00000589417 CUL9Q8IWT3 2517 aa19.12■□□□□ 0.65
H3F3B-207ENST00000589417 TDRD15B5MCY1 1934 aaKnown RBP19.12■□□□□ 0.65
H3F3B-207ENST00000589417 UBE4BO95155 1302 aa19.11■□□□□ 0.65
H3F3B-207ENST00000589417 DLL1O00548 723 aa19.11■□□□□ 0.65
H3F3B-207ENST00000589417 TRAPPC3O43617 180 aa19.11■□□□□ 0.65
H3F3B-207ENST00000589417 KLRC4O43908 158 aa19.11■□□□□ 0.65
H3F3B-207ENST00000589417 PRPF6O94906 941 aaKnown RBP19.11■□□□□ 0.65
H3F3B-207ENST00000589417 PAPLNO95428 1278 aa19.11■□□□□ 0.65
H3F3B-207ENST00000589417 LDHAP00338 332 aaKnown RBP19.11■□□□□ 0.65
H3F3B-207ENST00000589417 AFMP43652 599 aa19.11■□□□□ 0.65
H3F3B-207ENST00000589417 CLCN4P51793 760 aa19.11■□□□□ 0.65
H3F3B-207ENST00000589417 RBM10P98175 930 aaKnown RBP19.11■□□□□ 0.65
H3F3B-207ENST00000589417 BMT2Q1RMZ1 405 aa19.11■□□□□ 0.65
H3F3B-207ENST00000589417 KIAA1841Q6NSI8 718 aa19.11■□□□□ 0.65
H3F3B-207ENST00000589417 PDXDC1Q6P996 788 aa19.11■□□□□ 0.65
H3F3B-207ENST00000589417 SYCE2Q6PIF2 218 aa19.11■□□□□ 0.65
H3F3B-207ENST00000589417 PDZRN4Q6ZMN7 1036 aaPredicted RBP19.11■□□□□ 0.65
H3F3B-207ENST00000589417 TMEM87AQ8NBN3 555 aa19.11■□□□□ 0.65
H3F3B-207ENST00000589417 C3orf58Q8NDZ4 430 aa19.11■□□□□ 0.65
H3F3B-207ENST00000589417 GLIS3Q8NEA6 775 aa19.11■□□□□ 0.65
H3F3B-207ENST00000589417 POMGNT1Q8WZA1 660 aa19.11■□□□□ 0.65
H3F3B-207ENST00000589417 SUSD6Q92537 303 aa19.11■□□□□ 0.65
Retrieved 100 of 20,778 RNA–protein pairs in 37.1 ms