RNA–Protein interactions for RNA: ENST00000589318.5

DDX39A-209, Transcript of DExD-box helicase 39A, human

TSL 1 (best)

Gene DDX39A, Length 1,903 nt, Biotype retained intron, Subcellular localisation Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
DDX39A-209	ENST00000589318	PPP1R13L	Q8WUF5	828 aa		16.59	■□□□□ 0.25
DDX39A-209	ENST00000589318	INO80B	Q9C086	356 aa	Predicted RBP	16.59	■□□□□ 0.25
DDX39A-209	ENST00000589318	RBAK	Q9NYW8	714 aa	Predicted RBP	16.59	■□□□□ 0.25
DDX39A-209	ENST00000589318	PCDHA13	Q9Y5I0	950 aa		16.59	■□□□□ 0.25
DDX39A-209	ENST00000589318		A0A087X0T9	212 aa		16.58	■□□□□ 0.25
DDX39A-209	ENST00000589318	IPO7	O95373	1038 aa	Known RBP	16.58	■□□□□ 0.25
DDX39A-209	ENST00000589318	FAM228B	P0C875	321 aa		16.58	■□□□□ 0.25
DDX39A-209	ENST00000589318	SMIM10L2A	P0DMW4	78 aa		16.58	■□□□□ 0.25
DDX39A-209	ENST00000589318	SMIM10L2B	P0DMW5	78 aa		16.58	■□□□□ 0.25
DDX39A-209	ENST00000589318	AKR1A1	P14550	325 aa		16.58	■□□□□ 0.25
DDX39A-209	ENST00000589318	TMOD1	P28289	359 aa		16.58	■□□□□ 0.25
DDX39A-209	ENST00000589318	TNFSF9	P41273	254 aa		16.58	■□□□□ 0.25
DDX39A-209	ENST00000589318	STAT1	P42224	750 aa		16.58	■□□□□ 0.25
DDX39A-209	ENST00000589318	MATR3	P43243	847 aa	Known RBP eCLIP	16.58	■□□□□ 0.25
DDX39A-209	ENST00000589318	PHKA2	P46019	1235 aa		16.58	■□□□□ 0.25
DDX39A-209	ENST00000589318	CPT1A	P50416	773 aa		16.58	■□□□□ 0.25
DDX39A-209	ENST00000589318	ADAM17	P78536	824 aa		16.58	■□□□□ 0.25
DDX39A-209	ENST00000589318	BEX3	Q00994	111 aa		16.58	■□□□□ 0.25
DDX39A-209	ENST00000589318	PRKCZ	Q05513	592 aa		16.58	■□□□□ 0.25
DDX39A-209	ENST00000589318	SPA17	Q15506	151 aa		16.58	■□□□□ 0.25
DDX39A-209	ENST00000589318	SLC18A3	Q16572	532 aa		16.58	■□□□□ 0.25
DDX39A-209	ENST00000589318	ATF7IP2	Q5U623	682 aa		16.58	■□□□□ 0.25
DDX39A-209	ENST00000589318	LMBRD2	Q68DH5	695 aa	Predicted RBP	16.58	■□□□□ 0.25
DDX39A-209	ENST00000589318	FBXL13	Q8NEE6	735 aa		16.58	■□□□□ 0.25
DDX39A-209	ENST00000589318	JAKMIP2	Q96AA8	810 aa		16.58	■□□□□ 0.25
DDX39A-209	ENST00000589318	PPP1R16B	Q96T49	567 aa		16.58	■□□□□ 0.25
DDX39A-209	ENST00000589318	IFIH1	Q9BYX4	1025 aa	Known RBP	16.58	■□□□□ 0.25
DDX39A-209	ENST00000589318	CREBZF	Q9NS37	354 aa		16.58	■□□□□ 0.25
DDX39A-209	ENST00000589318	MBLAC1	A4D2B0	266 aa	Predicted RBP	16.58	■□□□□ 0.24
DDX39A-209	ENST00000589318	CTAGE15	A4D2H0	777 aa		16.58	■□□□□ 0.24
DDX39A-209	ENST00000589318	RRN3P2	A6NIE6	340 aa		16.58	■□□□□ 0.24
DDX39A-209	ENST00000589318	EBAG9	O00559	213 aa		16.58	■□□□□ 0.24
DDX39A-209	ENST00000589318	EVI5	O60447	810 aa		16.58	■□□□□ 0.24
DDX39A-209	ENST00000589318	CSDE1	O75534	798 aa	Known RBP	16.58	■□□□□ 0.24
DDX39A-209	ENST00000589318	GFPT2	O94808	682 aa		16.58	■□□□□ 0.24
DDX39A-209	ENST00000589318	C4BPA	P04003	597 aa	Known RBP	16.58	■□□□□ 0.24
DDX39A-209	ENST00000589318	CTAGE8	P0CG41	777 aa		16.58	■□□□□ 0.24
DDX39A-209	ENST00000589318	HARS	P12081	509 aa	Known RBP	16.58	■□□□□ 0.24
DDX39A-209	ENST00000589318	PRPF4B	Q13523	1007 aa	Known RBP	16.58	■□□□□ 0.24
DDX39A-209	ENST00000589318	MFSD10	Q14728	455 aa		16.58	■□□□□ 0.24
DDX39A-209	ENST00000589318	ENOX2	Q16206	610 aa	Known RBP	16.58	■□□□□ 0.24
DDX39A-209	ENST00000589318	ZACN	Q401N2	412 aa		16.58	■□□□□ 0.24
DDX39A-209	ENST00000589318	EEF1DP3	Q658K8	133 aa		16.58	■□□□□ 0.24
DDX39A-209	ENST00000589318	MPZL3	Q6UWV2	235 aa		16.58	■□□□□ 0.24
DDX39A-209	ENST00000589318	ZBTB33	Q86T24	672 aa		16.58	■□□□□ 0.24
DDX39A-209	ENST00000589318	KIAA1328	Q86T90	577 aa		16.58	■□□□□ 0.24
DDX39A-209	ENST00000589318	CTAGE6	Q86UF2	777 aa		16.58	■□□□□ 0.24
DDX39A-209	ENST00000589318	BRSK2	Q8IWQ3	736 aa		16.58	■□□□□ 0.24
DDX39A-209	ENST00000589318	CTAGE4	Q8IX94	777 aa		16.58	■□□□□ 0.24
DDX39A-209	ENST00000589318	KAT5	Q92993	513 aa		16.58	■□□□□ 0.24
DDX39A-209	ENST00000589318	AP5M1	Q9H0R1	490 aa		16.58	■□□□□ 0.24
DDX39A-209	ENST00000589318	UBE2T	Q9NPD8	197 aa	Predicted RBP	16.58	■□□□□ 0.24
DDX39A-209	ENST00000589318	BZW2	Q9Y6E2	419 aa	Known RBP	16.58	■□□□□ 0.24
DDX39A-209	ENST00000589318	DUSP10	Q9Y6W6	482 aa		16.58	■□□□□ 0.24
DDX39A-209	ENST00000589318	NRCAM	Q92823	1304 aa		16.58	■□□□□ 0.24
DDX39A-209	ENST00000589318	CTAGE9	A4FU28	777 aa		16.57	■□□□□ 0.24
DDX39A-209	ENST00000589318	OGT	O15294	1046 aa		16.57	■□□□□ 0.24
DDX39A-209	ENST00000589318	FER	P16591	822 aa		16.57	■□□□□ 0.24
DDX39A-209	ENST00000589318	ARHGAP44	Q17R89	818 aa		16.57	■□□□□ 0.24
DDX39A-209	ENST00000589318	CCDC122	Q5T0U0	273 aa		16.57	■□□□□ 0.24
DDX39A-209	ENST00000589318	NFRKB	Q6P4R8	1299 aa		16.57	■□□□□ 0.24
DDX39A-209	ENST00000589318	KREMEN1	Q96MU8	473 aa		16.57	■□□□□ 0.24
DDX39A-209	ENST00000589318	FNBP1	Q96RU3	617 aa		16.57	■□□□□ 0.24
DDX39A-209	ENST00000589318	SYT11	Q9BT88	431 aa		16.57	■□□□□ 0.24
DDX39A-209	ENST00000589318	PRMT7	Q9NVM4	692 aa	Predicted RBP	16.57	■□□□□ 0.24
DDX39A-209	ENST00000589318	RAB20	Q9NX57	234 aa		16.57	■□□□□ 0.24
DDX39A-209	ENST00000589318	ADAMTS1	Q9UHI8	967 aa		16.57	■□□□□ 0.24
DDX39A-209	ENST00000589318	CPSF3	Q9UKF6	684 aa	Known RBP	16.57	■□□□□ 0.24
DDX39A-209	ENST00000589318	NENF	Q9UMX5	172 aa		16.57	■□□□□ 0.24
DDX39A-209	ENST00000589318	GUCA1B	Q9UMX6	200 aa		16.57	■□□□□ 0.24
DDX39A-209	ENST00000589318	TNFSF13B	Q9Y275	285 aa		16.57	■□□□□ 0.24
DDX39A-209	ENST00000589318	MYADML2	A6NDP7	307 aa		16.57	■□□□□ 0.24
DDX39A-209	ENST00000589318	FOXN3	O00409	490 aa	Predicted RBP	16.57	■□□□□ 0.24
DDX39A-209	ENST00000589318	DUSP11	O75319	330 aa	Known RBP	16.57	■□□□□ 0.24
DDX39A-209	ENST00000589318	CALR	P27797	417 aa	Known RBP	16.57	■□□□□ 0.24
DDX39A-209	ENST00000589318	PSEN2	P49810	448 aa		16.57	■□□□□ 0.24
DDX39A-209	ENST00000589318	MNAT1	P51948	309 aa		16.57	■□□□□ 0.24
DDX39A-209	ENST00000589318	FSCN1	Q16658	493 aa	Known RBP	16.57	■□□□□ 0.24
DDX39A-209	ENST00000589318	ZNF569	Q5MCW4	686 aa		16.57	■□□□□ 0.24
DDX39A-209	ENST00000589318	TDRD10	Q5VZ19	366 aa	Known RBP	16.57	■□□□□ 0.24
DDX39A-209	ENST00000589318	HELQ	Q8TDG4	1101 aa		16.57	■□□□□ 0.24
DDX39A-209	ENST00000589318	PNKP	Q96T60	521 aa		16.57	■□□□□ 0.24
DDX39A-209	ENST00000589318	CGRRF1	Q99675	332 aa		16.57	■□□□□ 0.24
DDX39A-209	ENST00000589318	TCHP	Q9BT92	498 aa		16.57	■□□□□ 0.24
DDX39A-209	ENST00000589318	CFHR5	Q9BXR6	569 aa		16.57	■□□□□ 0.24
DDX39A-209	ENST00000589318	SCN10A	Q9Y5Y9	1956 aa		16.56	■□□□□ 0.24
DDX39A-209	ENST00000589318	PJA2	O43164	708 aa		16.56	■□□□□ 0.24
DDX39A-209	ENST00000589318	KRT86	O43790	486 aa		16.56	■□□□□ 0.24
DDX39A-209	ENST00000589318	RNF40	O75150	1001 aa		16.56	■□□□□ 0.24
DDX39A-209	ENST00000589318	VNN1	O95497	513 aa		16.56	■□□□□ 0.24
DDX39A-209	ENST00000589318	MAGEA1	P43355	309 aa		16.56	■□□□□ 0.24
DDX39A-209	ENST00000589318	PURA	Q00577	322 aa	Known RBP	16.56	■□□□□ 0.24
DDX39A-209	ENST00000589318	SATB1	Q01826	763 aa		16.56	■□□□□ 0.24
DDX39A-209	ENST00000589318	TRIM32	Q13049	653 aa		16.56	■□□□□ 0.24
DDX39A-209	ENST00000589318	CDR2L	Q86X02	465 aa	Predicted RBP	16.56	■□□□□ 0.24
DDX39A-209	ENST00000589318	REM2	Q8IYK8	340 aa	Predicted RBP	16.56	■□□□□ 0.24
DDX39A-209	ENST00000589318	SLC35F6	Q8N357	371 aa		16.56	■□□□□ 0.24
DDX39A-209	ENST00000589318	CDT1	Q9H211	546 aa		16.56	■□□□□ 0.24
DDX39A-209	ENST00000589318	UTP3	Q9NQZ2	479 aa	Known RBP eCLIP	16.56	■□□□□ 0.24	2e-6	■■■■■ 32
DDX39A-209	ENST00000589318	BCCIP	Q9P287	314 aa	Known RBP eCLIP	16.56	■□□□□ 0.24

Retrieved 100 of 20,778 RNA–protein pairs in 18.8 ms