RNA–Protein interactions for RNA: ENST00000589214.1

ERCC1-209, Transcript of ERCC excision repair 1, endonuclease non-catalytic subunit, humanhuman

TSL 3

Gene ERCC1, Length 674 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC1-209ENST00000589214 CITO14578 2027 aa16.63■□□□□ 0.25
ERCC1-209ENST00000589214 PDCD11Q14690 1871 aaKnown RBP16.63■□□□□ 0.25
ERCC1-209ENST00000589214 SMIM28A0A1B0GU29 152 aa16.62■□□□□ 0.25
ERCC1-209ENST00000589214 HNRNPDLO14979 420 aaKnown RBP16.62■□□□□ 0.25
ERCC1-209ENST00000589214 GLUD1P00367 558 aa16.62■□□□□ 0.25
ERCC1-209ENST00000589214 ALADP13716 330 aa16.62■□□□□ 0.25
ERCC1-209ENST00000589214 IDEP14735 1019 aa16.62■□□□□ 0.25
ERCC1-209ENST00000589214 LIG4P49917 911 aa16.62■□□□□ 0.25
ERCC1-209ENST00000589214 NUCB2P80303 420 aa16.62■□□□□ 0.25
ERCC1-209ENST00000589214 ZC2HC1CQ53FD0 456 aaPredicted RBP16.62■□□□□ 0.25
ERCC1-209ENST00000589214 FAM171A1Q5VUB5 890 aa16.62■□□□□ 0.25
ERCC1-209ENST00000589214 TMC5Q6UXY8 1006 aa16.62■□□□□ 0.25
ERCC1-209ENST00000589214 SFR1Q86XK3 245 aa16.62■□□□□ 0.25
ERCC1-209ENST00000589214 CEP57Q86XR8 500 aa16.62■□□□□ 0.25
ERCC1-209ENST00000589214 IQUBQ8NA54 791 aa16.62■□□□□ 0.25
ERCC1-209ENST00000589214 RIPOR3Q96MK2 946 aa16.62■□□□□ 0.25
ERCC1-209ENST00000589214 ACAP3Q96P50 834 aa16.62■□□□□ 0.25
ERCC1-209ENST00000589214 FIZ1Q96SL8 496 aa16.62■□□□□ 0.25
ERCC1-209ENST00000589214 RXFP1Q9HBX9 757 aa16.62■□□□□ 0.25
ERCC1-209ENST00000589214 C11orf16Q9NQ32 467 aa16.62■□□□□ 0.25
ERCC1-209ENST00000589214 TSHZ2Q9NRE2 1034 aa16.62■□□□□ 0.25
ERCC1-209ENST00000589214 DENND4AQ7Z401 1863 aa16.62■□□□□ 0.25
ERCC1-209ENST00000589214 VWA8A3KMH1 1905 aa16.61■□□□□ 0.25
ERCC1-209ENST00000589214 A0A1B0GVL5 298 aa16.61■□□□□ 0.25
ERCC1-209ENST00000589214 CLDN3O15551 220 aa16.61■□□□□ 0.25
ERCC1-209ENST00000589214 MEFVO15553 781 aaPredicted RBP16.61■□□□□ 0.25
ERCC1-209ENST00000589214 B3GAT3O94766 335 aa16.61■□□□□ 0.25
ERCC1-209ENST00000589214 RPL17P18621 184 aaKnown RBP16.61■□□□□ 0.25
ERCC1-209ENST00000589214 IGFBP6P24592 240 aaPredicted RBP16.61■□□□□ 0.25
ERCC1-209ENST00000589214 MTHFRP42898 656 aa16.61■□□□□ 0.25
ERCC1-209ENST00000589214 CLCNKBP51801 687 aa16.61■□□□□ 0.25
ERCC1-209ENST00000589214 SOX4Q06945 474 aaPredicted RBP16.61■□□□□ 0.25
ERCC1-209ENST00000589214 MCL1Q07820 350 aa16.61■□□□□ 0.25
ERCC1-209ENST00000589214 XKR4Q5GH76 650 aa16.61■□□□□ 0.25
ERCC1-209ENST00000589214 TMEM31Q5JXX7 168 aa16.61■□□□□ 0.25
ERCC1-209ENST00000589214 UROC1Q96N76 676 aa16.61■□□□□ 0.25
ERCC1-209ENST00000589214 ZMAT2Q96NC0 199 aaKnown RBP16.61■□□□□ 0.25
ERCC1-209ENST00000589214 NECTIN4Q96NY8 510 aa16.61■□□□□ 0.25
ERCC1-209ENST00000589214 HAPLN2Q9GZV7 340 aa16.61■□□□□ 0.25
ERCC1-209ENST00000589214 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP16.61■□□□□ 0.25
ERCC1-209ENST00000589214 CNTN3Q9P232 1028 aa16.61■□□□□ 0.25
ERCC1-209ENST00000589214 KCNH3Q9ULD8 1083 aa16.61■□□□□ 0.25
ERCC1-209ENST00000589214 TBX20Q9UMR3 447 aa16.61■□□□□ 0.25
ERCC1-209ENST00000589214 C2orf16Q68DN1 1984 aa16.6■□□□□ 0.25
ERCC1-209ENST00000589214 TMEM189-UBE2V1I3L0A0 370 aa16.6■□□□□ 0.25
ERCC1-209ENST00000589214 CXCL8P10145 99 aa16.6■□□□□ 0.25
ERCC1-209ENST00000589214 CASP1P29466 404 aa16.6■□□□□ 0.25
ERCC1-209ENST00000589214 CREMQ03060 361 aa16.6■□□□□ 0.25
ERCC1-209ENST00000589214 ELAVL2Q12926 359 aaKnown RBP16.6■□□□□ 0.25
ERCC1-209ENST00000589214 PSMD5Q16401 504 aa16.6■□□□□ 0.25
ERCC1-209ENST00000589214 HERC4Q5GLZ8 1057 aaPredicted RBP16.6■□□□□ 0.25
ERCC1-209ENST00000589214 ALKAL1Q6UXT8 129 aa16.6■□□□□ 0.25
ERCC1-209ENST00000589214 PALB2Q86YC2 1186 aa16.6■□□□□ 0.25
ERCC1-209ENST00000589214 C3orf58Q8NDZ4 430 aa16.6■□□□□ 0.25
ERCC1-209ENST00000589214 KCNN1Q92952 543 aa16.6■□□□□ 0.25
ERCC1-209ENST00000589214 TTPALQ9BTX7 342 aa16.6■□□□□ 0.25
ERCC1-209ENST00000589214 IKZF4Q9H2S9 585 aa16.6■□□□□ 0.25
ERCC1-209ENST00000589214 SLC38A7Q9NVC3 462 aa16.6■□□□□ 0.25
ERCC1-209ENST00000589214 PANK4Q9NVE7 773 aa16.6■□□□□ 0.25
ERCC1-209ENST00000589214 KBTBD4Q9NVX7 518 aa16.6■□□□□ 0.25
ERCC1-209ENST00000589214 BDP1A6H8Y1 2624 aa16.59■□□□□ 0.25
ERCC1-209ENST00000589214 I3L4J1 428 aa16.59■□□□□ 0.25
ERCC1-209ENST00000589214 PODXLO00592 558 aa16.59■□□□□ 0.25
ERCC1-209ENST00000589214 PIGRP01833 764 aa16.59■□□□□ 0.25
ERCC1-209ENST00000589214 SPATA31D3P0C874 917 aa16.59■□□□□ 0.25
ERCC1-209ENST00000589214 KCNE1P15382 129 aa16.59■□□□□ 0.25
ERCC1-209ENST00000589214 PFKFB1P16118 471 aa16.59■□□□□ 0.25
ERCC1-209ENST00000589214 CMA1P23946 247 aa16.59■□□□□ 0.25
ERCC1-209ENST00000589214 TNFSF9P41273 254 aa16.59■□□□□ 0.25
ERCC1-209ENST00000589214 AFMP43652 599 aa16.59■□□□□ 0.25
ERCC1-209ENST00000589214 BRCC3P46736 316 aa16.59■□□□□ 0.25
ERCC1-209ENST00000589214 GTF2BQ00403 316 aa16.59■□□□□ 0.25
ERCC1-209ENST00000589214 UPP1Q16831 310 aa16.59■□□□□ 0.25
ERCC1-209ENST00000589214 ATAT1Q5SQI0 421 aa16.59■□□□□ 0.25
ERCC1-209ENST00000589214 ADALQ6DHV7 355 aa16.59■□□□□ 0.25
ERCC1-209ENST00000589214 PDZRN4Q6ZMN7 1036 aaPredicted RBP16.59■□□□□ 0.25
ERCC1-209ENST00000589214 SPATA31D4Q6ZUB0 917 aa16.59■□□□□ 0.25
ERCC1-209ENST00000589214 ZNF720Q7Z2F6 126 aa16.59■□□□□ 0.25
ERCC1-209ENST00000589214 MAP4K3Q8IVH8 894 aa16.59■□□□□ 0.25
ERCC1-209ENST00000589214 GPR65Q8IYL9 337 aa16.59■□□□□ 0.25
ERCC1-209ENST00000589214 GRAMD1CQ8IYS0 662 aa16.59■□□□□ 0.25
ERCC1-209ENST00000589214 PIK3R5Q8WYR1 880 aa16.59■□□□□ 0.25
ERCC1-209ENST00000589214 HPS3Q969F9 1004 aa16.59■□□□□ 0.25
ERCC1-209ENST00000589214 C18orf25Q96B23 403 aaPredicted RBP16.59■□□□□ 0.25
ERCC1-209ENST00000589214 LRFN3Q9BTN0 628 aa16.59■□□□□ 0.25
ERCC1-209ENST00000589214 SCAND2PQ9GZW5 306 aaPredicted RBP16.59■□□□□ 0.25
ERCC1-209ENST00000589214 BLZF1Q9H2G9 400 aa16.59■□□□□ 0.25
ERCC1-209ENST00000589214 TNMDQ9H2S6 317 aa16.59■□□□□ 0.25
ERCC1-209ENST00000589214 CUEDC2Q9H467 287 aa16.59■□□□□ 0.25
ERCC1-209ENST00000589214 MRPL44Q9H9J2 332 aaKnown RBP16.59■□□□□ 0.25
ERCC1-209ENST00000589214 FNIP2Q9P278 1114 aa16.59■□□□□ 0.25
ERCC1-209ENST00000589214 SERTAD1Q9UHV2 236 aa16.59■□□□□ 0.25
ERCC1-209ENST00000589214 C5orf42Q9H799 3197 aa16.59■□□□□ 0.25
ERCC1-209ENST00000589214 C2CD4DB7Z1M9 353 aa16.58■□□□□ 0.24
ERCC1-209ENST00000589214 ANKRD63C9JTQ0 380 aa16.58■□□□□ 0.24
ERCC1-209ENST00000589214 TGM5O43548 720 aa16.58■□□□□ 0.24
ERCC1-209ENST00000589214 CLTAP09496 248 aa16.58■□□□□ 0.24
ERCC1-209ENST00000589214 GAP43P17677 238 aa16.58■□□□□ 0.24
ERCC1-209ENST00000589214 COL9A1P20849 921 aa16.58■□□□□ 0.24
ERCC1-209ENST00000589214 SCP2P22307 547 aa16.58■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 16.4 ms