RNA–Protein interactions for RNA: ENST00000589076.5

SMAD4-207, Transcript of SMAD family member 4, humanhuman

TSL 5

Gene SMAD4, Length 576 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD4-207ENST00000589076 UNQ6494/PRO21346Q6UXR6 183 aa4.56□□□□□ -1.68
SMAD4-207ENST00000589076 BHLHA9Q7RTU4 235 aa4.56□□□□□ -1.68
SMAD4-207ENST00000589076 TAS1R1Q7RTX1 841 aa4.56□□□□□ -1.68
SMAD4-207ENST00000589076 CHPFQ8IZ52 775 aa4.56□□□□□ -1.68
SMAD4-207ENST00000589076 OR10H5Q8NGA6 315 aa4.56□□□□□ -1.68
SMAD4-207ENST00000589076 PPP1R14CQ8TAE6 165 aa4.56□□□□□ -1.68
SMAD4-207ENST00000589076 TGFBRAP1Q8WUH2 860 aa4.56□□□□□ -1.68
SMAD4-207ENST00000589076 EAF2Q96CJ1 260 aaPredicted RBP4.56□□□□□ -1.68
SMAD4-207ENST00000589076 SOX7Q9BT81 388 aa4.56□□□□□ -1.68
SMAD4-207ENST00000589076 LSM14BQ9BX40 385 aaKnown RBP4.56□□□□□ -1.68
SMAD4-207ENST00000589076 CDH19Q9H159 772 aa4.56□□□□□ -1.68
SMAD4-207ENST00000589076 CCM2LQ9NUG4 571 aaPredicted RBP4.56□□□□□ -1.68
SMAD4-207ENST00000589076 GEMIN8Q9NWZ8 242 aaKnown RBP4.56□□□□□ -1.68
SMAD4-207ENST00000589076 DNAJC28Q9NX36 388 aa4.56□□□□□ -1.68
SMAD4-207ENST00000589076 LUC7L2Q9Y383 392 aaKnown RBP4.56□□□□□ -1.68
SMAD4-207ENST00000589076 CHST2Q9Y4C5 530 aa4.56□□□□□ -1.68
SMAD4-207ENST00000589076 PPP2R3BQ9Y5P8 575 aa4.56□□□□□ -1.68
SMAD4-207ENST00000589076 LEFTY2O00292 366 aa4.55□□□□□ -1.68
SMAD4-207ENST00000589076 PCDHGA12O60330 932 aa4.55□□□□□ -1.68
SMAD4-207ENST00000589076 LY86O95711 162 aa4.55□□□□□ -1.68
SMAD4-207ENST00000589076 PFKMP08237 780 aa4.55□□□□□ -1.68
SMAD4-207ENST00000589076 U2AF1L5P0DN76 240 aaPredicted RBP4.55□□□□□ -1.68
SMAD4-207ENST00000589076 TYRP1P17643 537 aa4.55□□□□□ -1.68
SMAD4-207ENST00000589076 U2AF1Q01081 240 aaKnown RBP eCLIP4.55□□□□□ -1.68
SMAD4-207ENST00000589076 APBA1Q02410 837 aa4.55□□□□□ -1.68
SMAD4-207ENST00000589076 CPEB4Q17RY0 729 aaKnown RBP eCLIP4.55□□□□□ -1.68
SMAD4-207ENST00000589076 PITRM1Q5JRX3 1037 aa4.55□□□□□ -1.68
SMAD4-207ENST00000589076 TOR2AQ5JU69 321 aa4.55□□□□□ -1.68
SMAD4-207ENST00000589076 TMEM240Q5SV17 173 aa4.55□□□□□ -1.68
SMAD4-207ENST00000589076 ZBTB41Q5SVQ8 909 aa4.55□□□□□ -1.68
SMAD4-207ENST00000589076 EFCAB2Q5VUJ9 269 aa4.55□□□□□ -1.68
SMAD4-207ENST00000589076 PDZD4Q76G19 769 aaPredicted RBP4.55□□□□□ -1.68
SMAD4-207ENST00000589076 KCNK18Q7Z418 384 aa4.55□□□□□ -1.68
SMAD4-207ENST00000589076 XYLT1Q86Y38 959 aa4.55□□□□□ -1.68
SMAD4-207ENST00000589076 CPA6Q8N4T0 437 aa4.55□□□□□ -1.68
SMAD4-207ENST00000589076 PIK3C3Q8NEB9 887 aa4.55□□□□□ -1.68
SMAD4-207ENST00000589076 TESQ9UGI8 421 aaKnown RBP4.55□□□□□ -1.68
SMAD4-207ENST00000589076 IP6K2Q9UHH9 426 aa4.55□□□□□ -1.68
SMAD4-207ENST00000589076 ZNF180Q9UJW8 692 aa4.55□□□□□ -1.68
SMAD4-207ENST00000589076 TMPRSS11EQ9UL52 423 aa4.55□□□□□ -1.68
SMAD4-207ENST00000589076 USP18Q9UMW8 372 aa4.55□□□□□ -1.68
SMAD4-207ENST00000589076 ANKRD6Q9Y2G4 727 aa4.55□□□□□ -1.68
SMAD4-207ENST00000589076 PCDHGA9Q9Y5G4 932 aaKnown RBP4.55□□□□□ -1.68
SMAD4-207ENST00000589076 PCDHGA8Q9Y5G5 932 aa4.55□□□□□ -1.68
SMAD4-207ENST00000589076 PCDHGA7Q9Y5G6 932 aa4.55□□□□□ -1.68
SMAD4-207ENST00000589076 PCDHGA6Q9Y5G7 932 aa4.55□□□□□ -1.68
SMAD4-207ENST00000589076 PCDHGA3Q9Y5H0 932 aa4.55□□□□□ -1.68
SMAD4-207ENST00000589076 PCDHGA2Q9Y5H1 932 aa4.55□□□□□ -1.68
SMAD4-207ENST00000589076 GPR45Q9Y5Y3 372 aa4.55□□□□□ -1.68
SMAD4-207ENST00000589076 FPGT-TNNI3KV9GXZ4 949 aa4.55□□□□□ -1.68
SMAD4-207ENST00000589076 UNC119BA6NIH7 251 aa4.54□□□□□ -1.68
SMAD4-207ENST00000589076 KRTAP29-1A8MX34 341 aaPredicted RBP4.54□□□□□ -1.68
SMAD4-207ENST00000589076 XPOTO43592 962 aaKnown RBP4.54□□□□□ -1.68
SMAD4-207ENST00000589076 FOSP01100 380 aaPredicted RBP4.54□□□□□ -1.68
SMAD4-207ENST00000589076 LPLP06858 475 aa4.54□□□□□ -1.68
SMAD4-207ENST00000589076 CT47B1P0C2W7 299 aaPredicted RBP4.54□□□□□ -1.68
SMAD4-207ENST00000589076 ITGAMP11215 1152 aa4.54□□□□□ -1.68
SMAD4-207ENST00000589076 AGXTP21549 392 aa4.54□□□□□ -1.68
SMAD4-207ENST00000589076 MTNR1BP49286 362 aa4.54□□□□□ -1.68
SMAD4-207ENST00000589076 SLC5A3P53794 718 aa4.54□□□□□ -1.68
SMAD4-207ENST00000589076 LGALS4P56470 323 aa4.54□□□□□ -1.68
SMAD4-207ENST00000589076 ODF1Q14990 250 aa4.54□□□□□ -1.68
SMAD4-207ENST00000589076 ACAP2Q15057 778 aa4.54□□□□□ -1.68
SMAD4-207ENST00000589076 ANO4Q32M45 955 aa4.54□□□□□ -1.68
SMAD4-207ENST00000589076 PAPD7Q5XG87 772 aaKnown RBP4.54□□□□□ -1.68
SMAD4-207ENST00000589076 SP5Q6BEB4 398 aaPredicted RBP4.54□□□□□ -1.68
SMAD4-207ENST00000589076 MICALCLQ6ZW33 695 aa4.54□□□□□ -1.68
SMAD4-207ENST00000589076 GLB1L2Q8IW92 636 aa4.54□□□□□ -1.68
SMAD4-207ENST00000589076 OR14C36Q8NHC7 312 aa4.54□□□□□ -1.68
SMAD4-207ENST00000589076 ZFP28Q8NHY6 868 aa4.54□□□□□ -1.68
SMAD4-207ENST00000589076 GAB3Q8WWW8 586 aa4.54□□□□□ -1.68
SMAD4-207ENST00000589076 JPH3Q8WXH2 748 aaPredicted RBP4.54□□□□□ -1.68
SMAD4-207ENST00000589076 AUTS2Q8WXX7 1259 aa4.54□□□□□ -1.68
SMAD4-207ENST00000589076 JADE3Q92613 823 aa4.54□□□□□ -1.68
SMAD4-207ENST00000589076 QRSL1Q9H0R6 528 aaKnown RBP4.54□□□□□ -1.68
SMAD4-207ENST00000589076 ZNF277Q9NRM2 450 aaPredicted RBP4.54□□□□□ -1.68
SMAD4-207ENST00000589076 PRSS50Q9UI38 385 aa4.54□□□□□ -1.68
SMAD4-207ENST00000589076 PNMA8BQ9ULN7 279 aaPredicted RBP4.54□□□□□ -1.68
SMAD4-207ENST00000589076 EDARQ9UNE0 448 aa4.54□□□□□ -1.68
SMAD4-207ENST00000589076 SCGB1D2O95969 90 aa4.53□□□□□ -1.68
SMAD4-207ENST00000589076 SRSF2Q01130 221 aaKnown RBP4.53□□□□□ -1.68
SMAD4-207ENST00000589076 FOXI1Q12951 378 aa4.53□□□□□ -1.68
SMAD4-207ENST00000589076 RESTQ13127 1097 aa4.53□□□□□ -1.68
SMAD4-207ENST00000589076 TP53BP2Q13625 1128 aa4.53□□□□□ -1.68
SMAD4-207ENST00000589076 LRRC41Q15345 812 aa4.53□□□□□ -1.68
SMAD4-207ENST00000589076 MUM1Q2TAK8 710 aa4.53□□□□□ -1.68
SMAD4-207ENST00000589076 FAM102BQ5T8I3 360 aa4.53□□□□□ -1.68
SMAD4-207ENST00000589076 NOL8Q76FK4 1167 aaKnown RBP4.53□□□□□ -1.68
SMAD4-207ENST00000589076 GPRIN1Q7Z2K8 1008 aa4.53□□□□□ -1.68
SMAD4-207ENST00000589076 LYSMD2Q8IV50 215 aa4.53□□□□□ -1.68
SMAD4-207ENST00000589076 SLC41A1Q8IVJ1 513 aa4.53□□□□□ -1.68
SMAD4-207ENST00000589076 TCEAL8Q8IYN2 117 aa4.53□□□□□ -1.68
SMAD4-207ENST00000589076 MYO1HQ8N1T3 1032 aa4.53□□□□□ -1.68
SMAD4-207ENST00000589076 SLC44A3Q8N4M1 653 aa4.53□□□□□ -1.68
SMAD4-207ENST00000589076 SMG7Q92540 1137 aaKnown RBP4.53□□□□□ -1.68
SMAD4-207ENST00000589076 TFAP2CQ92754 450 aa4.53□□□□□ -1.68
SMAD4-207ENST00000589076 TSR2Q969E8 191 aaKnown RBP4.53□□□□□ -1.68
SMAD4-207ENST00000589076 FATE1Q969F0 183 aa4.53□□□□□ -1.68
SMAD4-207ENST00000589076 HSPBAP1Q96EW2 488 aa4.53□□□□□ -1.68
SMAD4-207ENST00000589076 CCDC136Q96JN2 1154 aa4.53□□□□□ -1.68
Retrieved 100 of 20,778 RNA–protein pairs in 22 ms