RNA–Protein interactions for RNA: ENST00000588937.5

MBD1-217, Transcript of methyl-CpG binding domain protein 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene MBD1, Length 1,761 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MBD1-217ENST00000588937 CUL2Q13617 745 aa16.36■□□□□ 0.21
MBD1-217ENST00000588937 TFDP1Q14186 410 aa16.36■□□□□ 0.21
MBD1-217ENST00000588937 TTLL4Q14679 1199 aa16.36■□□□□ 0.21
MBD1-217ENST00000588937 WDR78Q5VTH9 848 aa16.36■□□□□ 0.21
MBD1-217ENST00000588937 DCAF12L1Q5VU92 463 aa16.36■□□□□ 0.21
MBD1-217ENST00000588937 SMYD5Q6GMV2 418 aa16.36■□□□□ 0.21
MBD1-217ENST00000588937 TRIM72Q6ZMU5 477 aa16.36■□□□□ 0.21
MBD1-217ENST00000588937 IMPG2Q9BZV3 1241 aa16.36■□□□□ 0.21
MBD1-217ENST00000588937 ACP6Q9NPH0 428 aa16.36■□□□□ 0.21
MBD1-217ENST00000588937 UTP11Q9Y3A2 253 aaKnown RBP16.36■□□□□ 0.21
MBD1-217ENST00000588937 IGKV6-21A0A0C4DH24 114 aa16.36■□□□□ 0.21
MBD1-217ENST00000588937 ESYT3A0FGR9 886 aa16.36■□□□□ 0.21
MBD1-217ENST00000588937 ZSCAN5CA6NGD5 496 aaPredicted RBP16.36■□□□□ 0.21
MBD1-217ENST00000588937 BHMG1C9JSJ3 638 aaPredicted RBP16.36■□□□□ 0.21
MBD1-217ENST00000588937 AGPSO00116 658 aa16.36■□□□□ 0.21
MBD1-217ENST00000588937 HBP1O60381 514 aa16.36■□□□□ 0.21
MBD1-217ENST00000588937 COMTP21964 271 aa16.36■□□□□ 0.21
MBD1-217ENST00000588937 MARK3P27448 753 aa16.36■□□□□ 0.21
MBD1-217ENST00000588937 PTENP60484 403 aa16.36■□□□□ 0.21
MBD1-217ENST00000588937 LAMTOR4Q0VGL1 99 aa16.36■□□□□ 0.21
MBD1-217ENST00000588937 PLCB4Q15147 1175 aa16.36■□□□□ 0.21
MBD1-217ENST00000588937 MAPK6Q16659 721 aa16.36■□□□□ 0.21
MBD1-217ENST00000588937 HSDL1Q3SXM5 330 aa16.36■□□□□ 0.21
MBD1-217ENST00000588937 SEL1L2Q5TEA6 688 aa16.36■□□□□ 0.21
MBD1-217ENST00000588937 LMBRD2Q68DH5 695 aaPredicted RBP16.36■□□□□ 0.21
MBD1-217ENST00000588937 CCDC62Q6P9F0 684 aa16.36■□□□□ 0.21
MBD1-217ENST00000588937 WDR49Q8IV35 697 aa16.36■□□□□ 0.21
MBD1-217ENST00000588937 BRSK2Q8IWQ3 736 aa16.36■□□□□ 0.21
MBD1-217ENST00000588937 TCHPQ9BT92 498 aa16.36■□□□□ 0.21
MBD1-217ENST00000588937 CCDC113Q9H0I3 377 aa16.36■□□□□ 0.21
MBD1-217ENST00000588937 RAB17Q9H0T7 212 aa16.36■□□□□ 0.21
MBD1-217ENST00000588937 AVENQ9NQS1 362 aaPredicted RBP16.36■□□□□ 0.21
MBD1-217ENST00000588937 CNOT8Q9UFF9 292 aaKnown RBP16.36■□□□□ 0.21
MBD1-217ENST00000588937 TRPC6Q9Y210 931 aa16.36■□□□□ 0.21
MBD1-217ENST00000588937 CNTNAP2Q9UHC6 1331 aa16.35■□□□□ 0.21
MBD1-217ENST00000588937 TMEM110-MUSTN1A8MSY1 372 aa16.35■□□□□ 0.21
MBD1-217ENST00000588937 MSCO60682 206 aa16.35■□□□□ 0.21
MBD1-217ENST00000588937 VNN1O95497 513 aa16.35■□□□□ 0.21
MBD1-217ENST00000588937 PRKCBP05771 671 aa16.35■□□□□ 0.21
MBD1-217ENST00000588937 UNGP13051 313 aaPredicted RBP16.35■□□□□ 0.21
MBD1-217ENST00000588937 CTNNA2P26232 953 aa16.35■□□□□ 0.21
MBD1-217ENST00000588937 CCNA1P78396 465 aa16.35■□□□□ 0.21
MBD1-217ENST00000588937 PPFIA1Q13136 1202 aa16.35■□□□□ 0.21
MBD1-217ENST00000588937 HLTFQ14527 1009 aaKnown RBP eCLIP16.35■□□□□ 0.21
MBD1-217ENST00000588937 FBXO16Q8IX29 292 aaPredicted RBP16.35■□□□□ 0.21
MBD1-217ENST00000588937 ACO2Q99798 780 aaKnown RBP16.35■□□□□ 0.21
MBD1-217ENST00000588937 PLVAPQ9BX97 442 aa16.35■□□□□ 0.21
MBD1-217ENST00000588937 FAM114A2Q9NRY5 505 aa16.35■□□□□ 0.21
MBD1-217ENST00000588937 SLTMQ9NWH9 1034 aaKnown RBP eCLIP16.35■□□□□ 0.212e-6■■■■■ 27.2
MBD1-217ENST00000588937 ZNFX1Q9P2E3 1918 aaKnown RBP16.35■□□□□ 0.21
MBD1-217ENST00000588937 OGTO15294 1046 aa16.34■□□□□ 0.21
MBD1-217ENST00000588937 ASAP2O43150 1006 aa16.34■□□□□ 0.21
MBD1-217ENST00000588937 SPOPO43791 374 aa16.34■□□□□ 0.21
MBD1-217ENST00000588937 CLTAP09496 248 aa16.34■□□□□ 0.21
MBD1-217ENST00000588937 TXNP10599 105 aaKnown RBP16.34■□□□□ 0.21
MBD1-217ENST00000588937 ITGA4P13612 1032 aa16.34■□□□□ 0.21
MBD1-217ENST00000588937 GYS2P54840 703 aa16.34■□□□□ 0.21
MBD1-217ENST00000588937 DRP2Q13474 957 aa16.34■□□□□ 0.21
MBD1-217ENST00000588937 DHX34Q14147 1143 aaKnown RBP16.34■□□□□ 0.21
MBD1-217ENST00000588937 CFAP58Q5T655 872 aa16.34■□□□□ 0.21
MBD1-217ENST00000588937 RNF149Q8NC42 400 aa16.34■□□□□ 0.21
MBD1-217ENST00000588937 ALG3Q92685 438 aa16.34■□□□□ 0.21
MBD1-217ENST00000588937 LRRC45Q96CN5 670 aa16.34■□□□□ 0.21
MBD1-217ENST00000588937 SLC10A4Q96EP9 437 aa16.34■□□□□ 0.21
MBD1-217ENST00000588937 SH3GL2Q99962 352 aa16.34■□□□□ 0.21
MBD1-217ENST00000588937 FAM204AQ9H8W3 233 aa16.34■□□□□ 0.21
MBD1-217ENST00000588937 AMACRQ9UHK6 382 aa16.34■□□□□ 0.21
MBD1-217ENST00000588937 PCDHB4Q9Y5E5 795 aa16.34■□□□□ 0.21
MBD1-217ENST00000588937 FAM187AA6NFU0 413 aa16.33■□□□□ 0.21
MBD1-217ENST00000588937 ITGBL1O95965 494 aaPredicted RBP16.33■□□□□ 0.21
MBD1-217ENST00000588937 SRGAP2CP0DJJ0 459 aa16.33■□□□□ 0.21
MBD1-217ENST00000588937 HARSP12081 509 aaKnown RBP16.33■□□□□ 0.21
MBD1-217ENST00000588937 CTNNA1P35221 906 aaKnown RBP16.33■□□□□ 0.21
MBD1-217ENST00000588937 NSFP46459 744 aaKnown RBP16.33■□□□□ 0.21
MBD1-217ENST00000588937 WNT7BP56706 349 aa16.33■□□□□ 0.21
MBD1-217ENST00000588937 NOP14P78316 857 aaKnown RBP16.33■□□□□ 0.21
MBD1-217ENST00000588937 MCL1Q07820 350 aa16.33■□□□□ 0.21
MBD1-217ENST00000588937 NCOA4Q13772 614 aa16.33■□□□□ 0.21
MBD1-217ENST00000588937 TSEN2Q8NCE0 465 aaKnown RBP16.33■□□□□ 0.21
MBD1-217ENST00000588937 SEC14L1Q92503 715 aa16.33■□□□□ 0.21
MBD1-217ENST00000588937 CD101Q93033 1021 aa16.33■□□□□ 0.21
MBD1-217ENST00000588937 RUNDC3BQ96NL0 473 aa16.33■□□□□ 0.21
MBD1-217ENST00000588937 R3HDMLQ9H3Y0 253 aa16.33■□□□□ 0.21
MBD1-217ENST00000588937 PLEKHA4Q9H4M7 779 aa16.33■□□□□ 0.21
MBD1-217ENST00000588937 GBA2Q9HCG7 927 aaPredicted RBP16.33■□□□□ 0.21
MBD1-217ENST00000588937 NMRK2Q9NPI5 230 aa16.33■□□□□ 0.21
MBD1-217ENST00000588937 RASAL2Q9UJF2 1139 aa16.33■□□□□ 0.21
MBD1-217ENST00000588937 CNTN6Q9UQ52 1028 aa16.33■□□□□ 0.21
MBD1-217ENST00000588937 PCDHA3Q9Y5H8 950 aa16.33■□□□□ 0.21
MBD1-217ENST00000588937 PTPRJQ12913 1337 aa16.33■□□□□ 0.21
MBD1-217ENST00000588937 ZBTB42B2RXF5 422 aa16.33■□□□□ 0.2
MBD1-217ENST00000588937 ATMINO43313 823 aaPredicted RBP16.33■□□□□ 0.2
MBD1-217ENST00000588937 CYP1A1P04798 512 aaPredicted RBP16.33■□□□□ 0.2
MBD1-217ENST00000588937 EDN1P05305 212 aa16.33■□□□□ 0.2
MBD1-217ENST00000588937 FAM153BP0C7A2 387 aa16.33■□□□□ 0.2
MBD1-217ENST00000588937 ACO1P21399 889 aaKnown RBP16.33■□□□□ 0.2
MBD1-217ENST00000588937 GJA5P36382 358 aa16.33■□□□□ 0.2
MBD1-217ENST00000588937 LMAN1P49257 510 aa16.33■□□□□ 0.2
MBD1-217ENST00000588937 PEX5P50542 639 aa16.33■□□□□ 0.2
MBD1-217ENST00000588937 CENPCQ03188 943 aa16.33■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 22.8 ms