RNA–Protein interactions for RNA: ENST00000588554.1

GPATCH8-206, Transcript of G-patch domain containing 8, humanhuman

TSL 2

Gene GPATCH8, Length 565 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPATCH8-206ENST00000588554 LIG1P18858 919 aa8.36□□□□□ -1.07
GPATCH8-206ENST00000588554 DSC1Q08554 894 aa8.36□□□□□ -1.07
GPATCH8-206ENST00000588554 MTMR3Q13615 1198 aa8.36□□□□□ -1.07
GPATCH8-206ENST00000588554 TFDP1Q14186 410 aa8.36□□□□□ -1.07
GPATCH8-206ENST00000588554 MXD4Q14582 209 aaPredicted RBP8.36□□□□□ -1.07
GPATCH8-206ENST00000588554 BMS1Q14692 1282 aaKnown RBP8.36□□□□□ -1.07
GPATCH8-206ENST00000588554 ECM1Q16610 540 aa8.36□□□□□ -1.07
GPATCH8-206ENST00000588554 KIAA1841Q6NSI8 718 aa8.36□□□□□ -1.07
GPATCH8-206ENST00000588554 NOTUMQ6P988 496 aa8.36□□□□□ -1.07
GPATCH8-206ENST00000588554 CCDC83Q8IWF9 413 aa8.36□□□□□ -1.07
GPATCH8-206ENST00000588554 EXOC8Q8IYI6 725 aa8.36□□□□□ -1.07
GPATCH8-206ENST00000588554 TDRD5Q8NAT2 981 aaKnown RBP8.36□□□□□ -1.07
GPATCH8-206ENST00000588554 HASPINQ8TF76 798 aa8.36□□□□□ -1.07
GPATCH8-206ENST00000588554 NECTIN4Q96NY8 510 aa8.36□□□□□ -1.07
GPATCH8-206ENST00000588554 RPS6KC1Q96S38 1066 aa8.36□□□□□ -1.07
GPATCH8-206ENST00000588554 EMILIN2Q9BXX0 1053 aa8.36□□□□□ -1.07
GPATCH8-206ENST00000588554 KCNH6Q9H252 994 aa8.36□□□□□ -1.07
GPATCH8-206ENST00000588554 MAN1C1Q9NR34 630 aa8.36□□□□□ -1.07
GPATCH8-206ENST00000588554 ANKEF1Q9NU02 776 aa8.36□□□□□ -1.07
GPATCH8-206ENST00000588554 DZANK1Q9NVP4 752 aa8.36□□□□□ -1.07
GPATCH8-206ENST00000588554 PARP2Q9UGN5 583 aa8.36□□□□□ -1.07
GPATCH8-206ENST00000588554 KMT2EQ8IZD2 1858 aa8.36□□□□□ -1.07
GPATCH8-206ENST00000588554 ARID2Q68CP9 1835 aa8.36□□□□□ -1.07
GPATCH8-206ENST00000588554 TRIOO75962 3097 aa8.35□□□□□ -1.07
GPATCH8-206ENST00000588554 CNTNAP2Q9UHC6 1331 aa8.35□□□□□ -1.07
GPATCH8-206ENST00000588554 LRRIQ4A6NIV6 560 aa8.35□□□□□ -1.07
GPATCH8-206ENST00000588554 NEFLP07196 543 aa8.35□□□□□ -1.07
GPATCH8-206ENST00000588554 NPR3P17342 541 aa8.35□□□□□ -1.07
GPATCH8-206ENST00000588554 GLUD2P49448 558 aa8.35□□□□□ -1.07
GPATCH8-206ENST00000588554 POU5F1BQ06416 359 aa8.35□□□□□ -1.07
GPATCH8-206ENST00000588554 NCBP1Q09161 790 aaKnown RBP8.35□□□□□ -1.07
GPATCH8-206ENST00000588554 GIT2Q14161 759 aa8.35□□□□□ -1.07
GPATCH8-206ENST00000588554 PRSS55Q6UWB4 352 aaPredicted RBP8.35□□□□□ -1.07
GPATCH8-206ENST00000588554 Q6ZVU0 165 aa8.35□□□□□ -1.07
GPATCH8-206ENST00000588554 RNF168Q8IYW5 571 aaPredicted RBP8.35□□□□□ -1.07
GPATCH8-206ENST00000588554 ZDHHC14Q8IZN3 488 aa8.35□□□□□ -1.07
GPATCH8-206ENST00000588554 CNNM3Q8NE01 707 aa8.35□□□□□ -1.07
GPATCH8-206ENST00000588554 ATOH1Q92858 354 aaPredicted RBP8.35□□□□□ -1.07
GPATCH8-206ENST00000588554 KIFC3Q9BVG8 833 aa8.35□□□□□ -1.07
GPATCH8-206ENST00000588554 SFXN1Q9H9B4 322 aa8.35□□□□□ -1.07
GPATCH8-206ENST00000588554 KCNK12Q9HB15 430 aa8.35□□□□□ -1.07
GPATCH8-206ENST00000588554 BRMS1Q9HCU9 246 aa8.35□□□□□ -1.07
GPATCH8-206ENST00000588554 UBN1Q9NPG3 1134 aa8.35□□□□□ -1.07
GPATCH8-206ENST00000588554 CHST7Q9NS84 486 aa8.35□□□□□ -1.07
GPATCH8-206ENST00000588554 PPME1Q9Y570 386 aa8.35□□□□□ -1.07
GPATCH8-206ENST00000588554 WDFY4Q6ZS81 3184 aa8.34□□□□□ -1.07
GPATCH8-206ENST00000588554 PLXNA3P51805 1871 aa8.34□□□□□ -1.07
GPATCH8-206ENST00000588554 CASTOR2A6NHX0 329 aa8.34□□□□□ -1.07
GPATCH8-206ENST00000588554 SOBPA7XYQ1 873 aa8.34□□□□□ -1.07
GPATCH8-206ENST00000588554 PTGESO14684 152 aa8.34□□□□□ -1.07
GPATCH8-206ENST00000588554 INPPL1O15357 1258 aa8.34□□□□□ -1.07
GPATCH8-206ENST00000588554 TGM5O43548 720 aa8.34□□□□□ -1.07
GPATCH8-206ENST00000588554 GAS2O43903 313 aaKnown RBP8.34□□□□□ -1.07
GPATCH8-206ENST00000588554 URODP06132 367 aa8.34□□□□□ -1.07
GPATCH8-206ENST00000588554 XRCC6P12956 609 aaKnown RBP eCLIP8.34□□□□□ -1.07
GPATCH8-206ENST00000588554 AXLP30530 894 aa8.34□□□□□ -1.07
GPATCH8-206ENST00000588554 CBLBQ13191 982 aa8.34□□□□□ -1.07
GPATCH8-206ENST00000588554 TRIM29Q14134 588 aa8.34□□□□□ -1.07
GPATCH8-206ENST00000588554 RTP2Q5QGT7 225 aa8.34□□□□□ -1.07
GPATCH8-206ENST00000588554 EEF1DP3Q658K8 133 aa8.34□□□□□ -1.07
GPATCH8-206ENST00000588554 SLC27A1Q6PCB7 646 aa8.34□□□□□ -1.07
GPATCH8-206ENST00000588554 PPFIBP1Q86W92 1011 aa8.34□□□□□ -1.07
GPATCH8-206ENST00000588554 CEP57Q86XR8 500 aa8.34□□□□□ -1.07
GPATCH8-206ENST00000588554 NOSTRINQ8IVI9 506 aa8.34□□□□□ -1.07
GPATCH8-206ENST00000588554 UBALD2Q8IYN6 164 aa8.34□□□□□ -1.07
GPATCH8-206ENST00000588554 C4orf32Q8N8J7 132 aa8.34□□□□□ -1.07
GPATCH8-206ENST00000588554 FLCNQ8NFG4 579 aa8.34□□□□□ -1.07
GPATCH8-206ENST00000588554 RIN2Q8WYP3 895 aaPredicted RBP8.34□□□□□ -1.07
GPATCH8-206ENST00000588554 ZNF707Q96C28 371 aaPredicted RBP8.34□□□□□ -1.07
GPATCH8-206ENST00000588554 CCDC43Q96MW1 224 aaKnown RBP8.34□□□□□ -1.07
GPATCH8-206ENST00000588554 HERC2P3Q9BVR0 1158 aa8.34□□□□□ -1.07
GPATCH8-206ENST00000588554 COLEC11Q9BWP8 271 aa8.34□□□□□ -1.07
GPATCH8-206ENST00000588554 TRIM6Q9C030 488 aaPredicted RBP8.34□□□□□ -1.07
GPATCH8-206ENST00000588554 FZD8Q9H461 694 aa8.34□□□□□ -1.07
GPATCH8-206ENST00000588554 PDZD7Q9H5P4 517 aa8.34□□□□□ -1.07
GPATCH8-206ENST00000588554 RXFP1Q9HBX9 757 aa8.34□□□□□ -1.07
GPATCH8-206ENST00000588554 SNTG2Q9NY99 539 aa8.34□□□□□ -1.07
GPATCH8-206ENST00000588554 GIT1Q9Y2X7 761 aa8.34□□□□□ -1.07
GPATCH8-206ENST00000588554 MYO10Q9HD67 2058 aa8.34□□□□□ -1.07
GPATCH8-206ENST00000588554 PP2D1A8MPX8 630 aa8.33□□□□□ -1.08
GPATCH8-206ENST00000588554 ADAM12O43184 909 aa8.33□□□□□ -1.08
GPATCH8-206ENST00000588554 WIPF1O43516 503 aa8.33□□□□□ -1.08
GPATCH8-206ENST00000588554 TADA2AO75478 443 aa8.33□□□□□ -1.08
GPATCH8-206ENST00000588554 GLUD1P00367 558 aa8.33□□□□□ -1.08
GPATCH8-206ENST00000588554 CDC25AP30304 524 aa8.33□□□□□ -1.08
GPATCH8-206ENST00000588554 GBP2P32456 591 aaPredicted RBP8.33□□□□□ -1.08
GPATCH8-206ENST00000588554 TOB1P50616 345 aaPredicted RBP8.33□□□□□ -1.08
GPATCH8-206ENST00000588554 RAB15P59190 212 aa8.33□□□□□ -1.08
GPATCH8-206ENST00000588554 NTHL1P78549 312 aa8.33□□□□□ -1.08
GPATCH8-206ENST00000588554 DSG1Q02413 1049 aa8.33□□□□□ -1.08
GPATCH8-206ENST00000588554 NAB2Q15742 525 aa8.33□□□□□ -1.08
GPATCH8-206ENST00000588554 IL17AQ16552 155 aa8.33□□□□□ -1.08
GPATCH8-206ENST00000588554 FUT10Q6P4F1 479 aa8.33□□□□□ -1.08
GPATCH8-206ENST00000588554 LILRA6Q6PI73 481 aa8.33□□□□□ -1.08
GPATCH8-206ENST00000588554 CCDC149Q6ZUS6 474 aa8.33□□□□□ -1.08
GPATCH8-206ENST00000588554 OTOP3Q7RTS5 596 aa8.33□□□□□ -1.08
GPATCH8-206ENST00000588554 RSPH1Q8WYR4 309 aa8.33□□□□□ -1.08
GPATCH8-206ENST00000588554 SMG7Q92540 1137 aaKnown RBP8.33□□□□□ -1.08
GPATCH8-206ENST00000588554 IRF7Q92985 503 aa8.33□□□□□ -1.08
GPATCH8-206ENST00000588554 C8orf76Q96K31 380 aa8.33□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 24.6 ms