RNA–Protein interactions for RNA: ENST00000587945.1

VMP1-206, Transcript of vacuole membrane protein 1, humanhuman

TSL 3

Gene VMP1, Length 583 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VMP1-206ENST00000587945 MPZL3Q6UWV2 235 aa15.72■□□□□ 0.11
VMP1-206ENST00000587945 SYT2Q8N9I0 419 aaPredicted RBP15.72■□□□□ 0.11
VMP1-206ENST00000587945 ATOH1Q92858 354 aaPredicted RBP15.72■□□□□ 0.11
VMP1-206ENST00000587945 CDK5RAP3Q96JB5 506 aa15.72■□□□□ 0.11
VMP1-206ENST00000587945 SNX27Q96L92 541 aa15.72■□□□□ 0.11
VMP1-206ENST00000587945 ACAP3Q96P50 834 aa15.72■□□□□ 0.11
VMP1-206ENST00000587945 C17orf75Q9HAS0 396 aa15.72■□□□□ 0.11
VMP1-206ENST00000587945 PI15O43692 258 aa15.71■□□□□ 0.11
VMP1-206ENST00000587945 CFHP08603 1231 aa15.71■□□□□ 0.11
VMP1-206ENST00000587945 MCF2P10911 925 aa15.71■□□□□ 0.11
VMP1-206ENST00000587945 LAMP2P13473 410 aa15.71■□□□□ 0.11
VMP1-206ENST00000587945 PLS3P13797 630 aa15.71■□□□□ 0.11
VMP1-206ENST00000587945 NPR3P17342 541 aa15.71■□□□□ 0.11
VMP1-206ENST00000587945 FSHRP23945 695 aa15.71■□□□□ 0.11
VMP1-206ENST00000587945 RAB33AQ14088 237 aa15.71■□□□□ 0.11
VMP1-206ENST00000587945 TMEM119Q4V9L6 283 aa15.71■□□□□ 0.11
VMP1-206ENST00000587945 PPM1LQ5SGD2 360 aa15.71■□□□□ 0.11
VMP1-206ENST00000587945 AXDND1Q5T1B0 1012 aaPredicted RBP15.71■□□□□ 0.11
VMP1-206ENST00000587945 LARP1BQ659C4 914 aaKnown RBP15.71■□□□□ 0.11
VMP1-206ENST00000587945 SIX5Q8N196 739 aa15.71■□□□□ 0.11
VMP1-206ENST00000587945 TMEM130Q8N3G9 435 aa15.71■□□□□ 0.11
VMP1-206ENST00000587945 SLC44A3Q8N4M1 653 aa15.71■□□□□ 0.11
VMP1-206ENST00000587945 TMEM161BQ8NDZ6 487 aa15.71■□□□□ 0.11
VMP1-206ENST00000587945 SLC7A14Q8TBB6 771 aa15.71■□□□□ 0.11
VMP1-206ENST00000587945 LRRC15Q8TF66 581 aa15.71■□□□□ 0.11
VMP1-206ENST00000587945 SPIRE2Q8WWL2 714 aa15.71■□□□□ 0.11
VMP1-206ENST00000587945 C18orf25Q96B23 403 aaPredicted RBP15.71■□□□□ 0.11
VMP1-206ENST00000587945 DDX27Q96GQ7 796 aaKnown RBP15.71■□□□□ 0.11
VMP1-206ENST00000587945 UROC1Q96N76 676 aa15.71■□□□□ 0.11
VMP1-206ENST00000587945 NTPCRQ9BSD7 190 aaKnown RBP15.71■□□□□ 0.11
VMP1-206ENST00000587945 TIPINQ9BVW5 301 aa15.71■□□□□ 0.11
VMP1-206ENST00000587945 TOPORSQ9NS56 1045 aaPredicted RBP15.71■□□□□ 0.11
VMP1-206ENST00000587945 ANKFY1Q9P2R3 1169 aa15.71■□□□□ 0.11
VMP1-206ENST00000587945 MTRRQ9UBK8 725 aa15.71■□□□□ 0.11
VMP1-206ENST00000587945 POLIQ9UNA4 740 aa15.71■□□□□ 0.11
VMP1-206ENST00000587945 CDY1Q9Y6F8 540 aa15.71■□□□□ 0.11
VMP1-206ENST00000587945 MYO10Q9HD67 2058 aa15.71■□□□□ 0.1
VMP1-206ENST00000587945 PLXNA3P51805 1871 aa15.7■□□□□ 0.1
VMP1-206ENST00000587945 PODXLO00592 558 aa15.7■□□□□ 0.1
VMP1-206ENST00000587945 MAPTP10636 758 aaKnown RBP15.7■□□□□ 0.1
VMP1-206ENST00000587945 MCM2P49736 904 aa15.7■□□□□ 0.1
VMP1-206ENST00000587945 CLCN5P51795 746 aa15.7■□□□□ 0.1
VMP1-206ENST00000587945 STRN3Q13033 797 aa15.7■□□□□ 0.1
VMP1-206ENST00000587945 ARSHQ5FYA8 562 aa15.7■□□□□ 0.1
VMP1-206ENST00000587945 ARL6IP4Q66PJ3 421 aaKnown RBP15.7■□□□□ 0.1
VMP1-206ENST00000587945 PDXDC1Q6P996 788 aa15.7■□□□□ 0.1
VMP1-206ENST00000587945 TBC1D32Q96NH3 1257 aa15.7■□□□□ 0.1
VMP1-206ENST00000587945 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP15.7■□□□□ 0.1
VMP1-206ENST00000587945 TDRD15B5MCY1 1934 aaKnown RBP15.69■□□□□ 0.1
VMP1-206ENST00000587945 KRBA1A5PL33 1030 aa15.69■□□□□ 0.1
VMP1-206ENST00000587945 TRAPPC3O43617 180 aa15.69■□□□□ 0.1
VMP1-206ENST00000587945 TOM1L1O75674 476 aa15.69■□□□□ 0.1
VMP1-206ENST00000587945 HNRNPA1P09651 372 aaKnown RBP eCLIP15.69■□□□□ 0.1
VMP1-206ENST00000587945 KCNE1P15382 129 aa15.69■□□□□ 0.1
VMP1-206ENST00000587945 SMTNP53814 917 aa15.69■□□□□ 0.1
VMP1-206ENST00000587945 GRIN1Q05586 938 aa15.69■□□□□ 0.1
VMP1-206ENST00000587945 HTR4Q13639 388 aa15.69■□□□□ 0.1
VMP1-206ENST00000587945 DHX8Q14562 1220 aaKnown RBP15.69■□□□□ 0.1
VMP1-206ENST00000587945 ANKS3Q6ZW76 656 aa15.69■□□□□ 0.1
VMP1-206ENST00000587945 RPP25Q9BUL9 199 aaKnown RBP15.69■□□□□ 0.1
VMP1-206ENST00000587945 HAPLN2Q9GZV7 340 aa15.69■□□□□ 0.1
VMP1-206ENST00000587945 SLC38A7Q9NVC3 462 aa15.69■□□□□ 0.1
VMP1-206ENST00000587945 HCFC1R1Q9NWW0 138 aa15.69■□□□□ 0.1
VMP1-206ENST00000587945 CNTN3Q9P232 1028 aa15.69■□□□□ 0.1
VMP1-206ENST00000587945 DAXXQ9UER7 740 aaPredicted RBP15.69■□□□□ 0.1
VMP1-206ENST00000587945 CA14Q9ULX7 337 aa15.69■□□□□ 0.1
VMP1-206ENST00000587945 ZSCAN21Q9Y5A6 473 aaPredicted RBP15.69■□□□□ 0.1
VMP1-206ENST00000587945 BACE2Q9Y5Z0 518 aa15.69■□□□□ 0.1
VMP1-206ENST00000587945 NUMBLQ9Y6R0 609 aa15.69■□□□□ 0.1
VMP1-206ENST00000587945 DENND4AQ7Z401 1863 aa15.69■□□□□ 0.1
VMP1-206ENST00000587945 ANHXE9PGG2 379 aa15.68■□□□□ 0.1
VMP1-206ENST00000587945 NUBP1P53384 320 aa15.68■□□□□ 0.1
VMP1-206ENST00000587945 SPAG1Q07617 926 aa15.68■□□□□ 0.1
VMP1-206ENST00000587945 NOLC1Q14978 699 aaKnown RBP eCLIP15.68■□□□□ 0.1
VMP1-206ENST00000587945 SLC10A6Q3KNW5 377 aa15.68■□□□□ 0.1
VMP1-206ENST00000587945 VARS2Q5ST30 1063 aaKnown RBP15.68■□□□□ 0.1
VMP1-206ENST00000587945 PARM1Q6UWI2 310 aa15.68■□□□□ 0.1
VMP1-206ENST00000587945 GPBP1Q86WP2 473 aa15.68■□□□□ 0.1
VMP1-206ENST00000587945 ITFG1Q8TB96 612 aa15.68■□□□□ 0.1
VMP1-206ENST00000587945 NXPE3Q969Y0 559 aa15.68■□□□□ 0.1
VMP1-206ENST00000587945 CDH7Q9ULB5 785 aa15.68■□□□□ 0.1
VMP1-206ENST00000587945 C2orf16Q68DN1 1984 aa15.67■□□□□ 0.1
VMP1-206ENST00000587945 KMT2EQ8IZD2 1858 aa15.67■□□□□ 0.1
VMP1-206ENST00000587945 CACNA1HO95180 2353 aa15.67■□□□□ 0.1
VMP1-206ENST00000587945 STK25O00506 426 aa15.67■□□□□ 0.1
VMP1-206ENST00000587945 CLDN3O15551 220 aa15.67■□□□□ 0.1
VMP1-206ENST00000587945 XYLBO75191 536 aa15.67■□□□□ 0.1
VMP1-206ENST00000587945 SRFP11831 508 aa15.67■□□□□ 0.1
VMP1-206ENST00000587945 AOC1P19801 751 aa15.67■□□□□ 0.1
VMP1-206ENST00000587945 HOXA9P31269 272 aa15.67■□□□□ 0.1
VMP1-206ENST00000587945 UBA7P41226 1012 aa15.67■□□□□ 0.1
VMP1-206ENST00000587945 MATR3P43243 847 aaKnown RBP eCLIP15.67■□□□□ 0.1
VMP1-206ENST00000587945 ARPP19P56211 112 aa15.67■□□□□ 0.1
VMP1-206ENST00000587945 MCL1Q07820 350 aa15.67■□□□□ 0.1
VMP1-206ENST00000587945 ZPBP2Q6X784 338 aa15.67■□□□□ 0.1
VMP1-206ENST00000587945 KCTD17Q8N5Z5 321 aa15.67■□□□□ 0.1
VMP1-206ENST00000587945 GPR152Q8TDT2 470 aa15.67■□□□□ 0.1
VMP1-206ENST00000587945 FGF13Q92913 245 aa15.67■□□□□ 0.1
VMP1-206ENST00000587945 FGF14Q92915 247 aa15.67■□□□□ 0.1
VMP1-206ENST00000587945 BICD1Q96G01 975 aa15.67■□□□□ 0.1
Retrieved 100 of 20,778 RNA–protein pairs in 25.3 ms