RNA–Protein interactions for RNA: ENST00000586813.5

TRAF4-216, Transcript of TNF receptor associated factor 4, humanhuman

TSL 3

Gene TRAF4, Length 789 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF4-216ENST00000586813 U2AF2P26368 475 aaKnown RBP eCLIP21.26■□□□□ 0.991e-6■□□□□ 8.6
TRAF4-216ENST00000586813 GRM5P41594 1212 aa21.26■□□□□ 0.99
TRAF4-216ENST00000586813 NPTX2P47972 431 aa21.26■□□□□ 0.99
TRAF4-216ENST00000586813 TOB1P50616 345 aaPredicted RBP21.26■□□□□ 0.99
TRAF4-216ENST00000586813 PEX3P56589 373 aa21.26■□□□□ 0.99
TRAF4-216ENST00000586813 PTGDRQ13258 359 aa21.26■□□□□ 0.99
TRAF4-216ENST00000586813 ZNF568Q3ZCX4 644 aa21.26■□□□□ 0.99
TRAF4-216ENST00000586813 CD300LGQ6UXG3 332 aa21.26■□□□□ 0.99
TRAF4-216ENST00000586813 C3orf58Q8NDZ4 430 aa21.26■□□□□ 0.99
TRAF4-216ENST00000586813 ITFG1Q8TB96 612 aa21.26■□□□□ 0.99
TRAF4-216ENST00000586813 DDX27Q96GQ7 796 aaKnown RBP21.26■□□□□ 0.99
TRAF4-216ENST00000586813 RPP25Q9BUL9 199 aaKnown RBP21.26■□□□□ 0.99
TRAF4-216ENST00000586813 CDT1Q9H211 546 aa21.26■□□□□ 0.99
TRAF4-216ENST00000586813 CDY1Q9Y6F8 540 aa21.26■□□□□ 0.99
TRAF4-216ENST00000586813 PATJQ8NI35 1801 aa21.25■□□□□ 0.99
TRAF4-216ENST00000586813 SMIM28A0A1B0GU29 152 aa21.25■□□□□ 0.99
TRAF4-216ENST00000586813 TKTP29401 623 aaKnown RBP21.25■□□□□ 0.99
TRAF4-216ENST00000586813 YARSP54577 528 aaKnown RBP21.25■□□□□ 0.99
TRAF4-216ENST00000586813 DMP1Q13316 513 aaPredicted RBP21.25■□□□□ 0.99
TRAF4-216ENST00000586813 UVSSAQ2YD98 709 aa21.25■□□□□ 0.99
TRAF4-216ENST00000586813 RSPO2Q6UXX9 243 aaPredicted RBP21.25■□□□□ 0.99
TRAF4-216ENST00000586813 MTSS1LQ765P7 747 aa21.25■□□□□ 0.99
TRAF4-216ENST00000586813 DAW1Q8N136 415 aa21.25■□□□□ 0.99
TRAF4-216ENST00000586813 SNX27Q96L92 541 aa21.25■□□□□ 0.99
TRAF4-216ENST00000586813 ACO2Q99798 780 aaKnown RBP21.25■□□□□ 0.99
TRAF4-216ENST00000586813 CCDC94Q9BW85 323 aaPredicted RBP21.25■□□□□ 0.99
TRAF4-216ENST00000586813 PTPRHQ9HD43 1115 aa21.25■□□□□ 0.99
TRAF4-216ENST00000586813 TOPORSQ9NS56 1045 aaPredicted RBP21.25■□□□□ 0.99
TRAF4-216ENST00000586813 HCFC1R1Q9NWW0 138 aa21.25■□□□□ 0.99
TRAF4-216ENST00000586813 DLGAP2Q9P1A6 1054 aa21.25■□□□□ 0.99
TRAF4-216ENST00000586813 SIT1Q9Y3P8 196 aa21.25■□□□□ 0.99
TRAF4-216ENST00000586813 PCDHB6Q9Y5E3 794 aa21.25■□□□□ 0.99
TRAF4-216ENST00000586813 BACE2Q9Y5Z0 518 aa21.25■□□□□ 0.99
TRAF4-216ENST00000586813 SPTBN4Q9H254 2564 aa21.25■□□□□ 0.99
TRAF4-216ENST00000586813 PP2D1A8MPX8 630 aa21.24■□□□□ 0.99
TRAF4-216ENST00000586813 E9PMD0 336 aa21.24■□□□□ 0.99
TRAF4-216ENST00000586813 I3L4J1 428 aa21.24■□□□□ 0.99
TRAF4-216ENST00000586813 TRAPPC3O43617 180 aa21.24■□□□□ 0.99
TRAF4-216ENST00000586813 HIP1RO75146 1068 aa21.24■□□□□ 0.99
TRAF4-216ENST00000586813 DCNP07585 359 aaKnown RBP21.24■□□□□ 0.99
TRAF4-216ENST00000586813 BRCC3P46736 316 aa21.24■□□□□ 0.99
TRAF4-216ENST00000586813 GPC5P78333 572 aa21.24■□□□□ 0.99
TRAF4-216ENST00000586813 SOX4Q06945 474 aaPredicted RBP21.24■□□□□ 0.99
TRAF4-216ENST00000586813 XKR4Q5GH76 650 aa21.24■□□□□ 0.99
TRAF4-216ENST00000586813 SPECC1Q5M775 1068 aa21.24■□□□□ 0.99
TRAF4-216ENST00000586813 ANKS3Q6ZW76 656 aa21.24■□□□□ 0.99
TRAF4-216ENST00000586813 ADSSL1Q8N142 457 aa21.24■□□□□ 0.99
TRAF4-216ENST00000586813 RUSC1Q9BVN2 902 aa21.24■□□□□ 0.99
TRAF4-216ENST00000586813 MRPL4Q9BYD3 311 aaKnown RBP21.24■□□□□ 0.99
TRAF4-216ENST00000586813 TMEM134Q9H6X4 195 aa21.24■□□□□ 0.99
TRAF4-216ENST00000586813 ARHGAP28Q9P2N2 729 aa21.24■□□□□ 0.99
TRAF4-216ENST00000586813 DNM3Q9UQ16 869 aa21.24■□□□□ 0.99
TRAF4-216ENST00000586813 LAD1O00515 517 aa21.23■□□□□ 0.99
TRAF4-216ENST00000586813 OSTNP61366 133 aa21.23■□□□□ 0.99
TRAF4-216ENST00000586813 PABPC1LQ4VXU2 614 aaKnown RBP21.23■□□□□ 0.99
TRAF4-216ENST00000586813 KRT79Q5XKE5 535 aa21.23■□□□□ 0.99
TRAF4-216ENST00000586813 ALKAL1Q6UXT8 129 aa21.23■□□□□ 0.99
TRAF4-216ENST00000586813 RTL10Q7L3V2 364 aa21.23■□□□□ 0.99
TRAF4-216ENST00000586813 TAS1R3Q7RTX0 852 aa21.23■□□□□ 0.99
TRAF4-216ENST00000586813 NPAS3Q8IXF0 933 aa21.23■□□□□ 0.99
TRAF4-216ENST00000586813 PJA1Q8NG27 643 aa21.23■□□□□ 0.99
TRAF4-216ENST00000586813 DRC1Q96MC2 740 aa21.23■□□□□ 0.99
TRAF4-216ENST00000586813 KIF2CQ99661 725 aa21.23■□□□□ 0.99
TRAF4-216ENST00000586813 FOXQ1Q9C009 403 aa21.23■□□□□ 0.99
TRAF4-216ENST00000586813 KMT5AQ9NQR1 393 aa21.23■□□□□ 0.99
TRAF4-216ENST00000586813 SLC38A7Q9NVC3 462 aa21.23■□□□□ 0.99
TRAF4-216ENST00000586813 DNMT3BQ9UBC3 853 aaKnown RBP21.23■□□□□ 0.99
TRAF4-216ENST00000586813 PROZP22891 400 aa21.22■□□□□ 0.99
TRAF4-216ENST00000586813 STARD6P59095 220 aa21.22■□□□□ 0.99
TRAF4-216ENST00000586813 MAPK7Q13164 816 aa21.22■□□□□ 0.99
TRAF4-216ENST00000586813 IL17AQ16552 155 aa21.22■□□□□ 0.99
TRAF4-216ENST00000586813 ZMAT2Q96NC0 199 aaKnown RBP21.22■□□□□ 0.99
TRAF4-216ENST00000586813 TARS2Q9BW92 718 aaKnown RBP21.22■□□□□ 0.99
TRAF4-216ENST00000586813 KCNH3Q9ULD8 1083 aa21.22■□□□□ 0.99
TRAF4-216ENST00000586813 DCHS1Q96JQ0 3298 aa21.22■□□□□ 0.99
TRAF4-216ENST00000586813 GVINP1Q7Z2Y8 2422 aa21.21■□□□□ 0.99
TRAF4-216ENST00000586813 PODXLO00592 558 aa21.21■□□□□ 0.99
TRAF4-216ENST00000586813 ABLIM1O14639 778 aa21.21■□□□□ 0.99
TRAF4-216ENST00000586813 MCF2P10911 925 aa21.21■□□□□ 0.99
TRAF4-216ENST00000586813 CDC25AP30304 524 aa21.21■□□□□ 0.99
TRAF4-216ENST00000586813 PRPHP41219 470 aa21.21■□□□□ 0.99
TRAF4-216ENST00000586813 ROR1Q01973 937 aa21.21■□□□□ 0.99
TRAF4-216ENST00000586813 VARS2Q5ST30 1063 aaKnown RBP21.21■□□□□ 0.99
TRAF4-216ENST00000586813 SLC8B1Q6J4K2 584 aa21.21■□□□□ 0.99
TRAF4-216ENST00000586813 RINT1Q6NUQ1 792 aa21.21■□□□□ 0.99
TRAF4-216ENST00000586813 C1orf186Q6ZWK4 172 aa21.21■□□□□ 0.99
TRAF4-216ENST00000586813 KCNK18Q7Z418 384 aa21.21■□□□□ 0.99
TRAF4-216ENST00000586813 ING5Q8WYH8 240 aa21.21■□□□□ 0.99
TRAF4-216ENST00000586813 SHDQ96IW2 340 aa21.21■□□□□ 0.99
TRAF4-216ENST00000586813 KXD1Q9BQD3 176 aa21.21■□□□□ 0.99
TRAF4-216ENST00000586813 MMTAG2Q9BU76 263 aaKnown RBP21.21■□□□□ 0.99
TRAF4-216ENST00000586813 C17orf75Q9HAS0 396 aa21.21■□□□□ 0.99
TRAF4-216ENST00000586813 RBM19Q9Y4C8 960 aaKnown RBP21.21■□□□□ 0.99
TRAF4-216ENST00000586813 GLULP15104 373 aa21.2■□□□□ 0.98
TRAF4-216ENST00000586813 KCNE1P15382 129 aa21.2■□□□□ 0.98
TRAF4-216ENST00000586813 SNW1Q13573 536 aaKnown RBP21.2■□□□□ 0.98
TRAF4-216ENST00000586813 MPZL3Q6UWV2 235 aa21.2■□□□□ 0.98
TRAF4-216ENST00000586813 DTHD1Q6ZMT9 781 aa21.2■□□□□ 0.98
TRAF4-216ENST00000586813 ZNF461Q8TAF7 563 aa21.2■□□□□ 0.98
TRAF4-216ENST00000586813 ACAP3Q96P50 834 aa21.2■□□□□ 0.98
Retrieved 100 of 20,778 RNA–protein pairs in 23.2 ms