RNA–Protein interactions for RNA: ENST00000586080.1

R3HDM4-202, Transcript of R3H domain containing 4, humanhuman

TSL 4

Gene R3HDM4, Length 537 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
R3HDM4-202ENST00000586080 SPDYE4A6NLX3 237 aa23.63■■□□□ 1.37
R3HDM4-202ENST00000586080 MEFVO15553 781 aaPredicted RBP23.63■■□□□ 1.37
R3HDM4-202ENST00000586080 PPP1R37O75864 691 aa23.63■■□□□ 1.37
R3HDM4-202ENST00000586080 KCNE1P15382 129 aa23.63■■□□□ 1.37
R3HDM4-202ENST00000586080 PFKFB1P16118 471 aa23.63■■□□□ 1.37
R3HDM4-202ENST00000586080 EPCAMP16422 314 aa23.63■■□□□ 1.37
R3HDM4-202ENST00000586080 AFMP43652 599 aa23.63■■□□□ 1.37
R3HDM4-202ENST00000586080 CASP5P51878 434 aa23.63■■□□□ 1.37
R3HDM4-202ENST00000586080 NUCB2P80303 420 aa23.63■■□□□ 1.37
R3HDM4-202ENST00000586080 DSG1Q02413 1049 aa23.63■■□□□ 1.37
R3HDM4-202ENST00000586080 PPP2R3AQ06190 1150 aa23.63■■□□□ 1.37
R3HDM4-202ENST00000586080 SOX4Q06945 474 aaPredicted RBP23.63■■□□□ 1.37
R3HDM4-202ENST00000586080 SPAG1Q07617 926 aa23.63■■□□□ 1.37
R3HDM4-202ENST00000586080 KCNA1Q09470 495 aa23.63■■□□□ 1.37
R3HDM4-202ENST00000586080 KCNC3Q14003 757 aa23.63■■□□□ 1.37
R3HDM4-202ENST00000586080 ADALQ6DHV7 355 aa23.63■■□□□ 1.37
R3HDM4-202ENST00000586080 SYCP3Q8IZU3 236 aa23.63■■□□□ 1.37
R3HDM4-202ENST00000586080 SMRP1Q8NCR6 262 aa23.63■■□□□ 1.37
R3HDM4-202ENST00000586080 RIN2Q8WYP3 895 aaPredicted RBP23.63■■□□□ 1.37
R3HDM4-202ENST00000586080 C18orf25Q96B23 403 aaPredicted RBP23.63■■□□□ 1.37
R3HDM4-202ENST00000586080 FAM212AQ96EL1 285 aa23.63■■□□□ 1.37
R3HDM4-202ENST00000586080 FGFBP2Q9BYJ0 223 aa23.63■■□□□ 1.37
R3HDM4-202ENST00000586080 BLZF1Q9H2G9 400 aa23.63■■□□□ 1.37
R3HDM4-202ENST00000586080 RPF1Q9H9Y2 349 aaKnown RBP23.63■■□□□ 1.37
R3HDM4-202ENST00000586080 GDPD2Q9HCC8 539 aa23.63■■□□□ 1.37
R3HDM4-202ENST00000586080 EFEMP2O95967 443 aa23.62■■□□□ 1.37
R3HDM4-202ENST00000586080 CASP1P29466 404 aa23.62■■□□□ 1.37
R3HDM4-202ENST00000586080 ALCAMQ13740 583 aa23.62■■□□□ 1.37
R3HDM4-202ENST00000586080 FAM171A1Q5VUB5 890 aa23.62■■□□□ 1.37
R3HDM4-202ENST00000586080 SLFN12LQ6IEE8 588 aa23.62■■□□□ 1.37
R3HDM4-202ENST00000586080 TMEM184AQ6ZMB5 413 aa23.62■■□□□ 1.37
R3HDM4-202ENST00000586080 PPFIBP1Q86W92 1011 aa23.62■■□□□ 1.37
R3HDM4-202ENST00000586080 POMGNT1Q8WZA1 660 aa23.62■■□□□ 1.37
R3HDM4-202ENST00000586080 HPS3Q969F9 1004 aa23.62■■□□□ 1.37
R3HDM4-202ENST00000586080 KIF12Q96FN5 646 aa23.62■■□□□ 1.37
R3HDM4-202ENST00000586080 SERTAD1Q9UHV2 236 aa23.62■■□□□ 1.37
R3HDM4-202ENST00000586080 USP15Q9Y4E8 981 aaPredicted RBP23.62■■□□□ 1.37
R3HDM4-202ENST00000586080 TTC28Q96AY4 2481 aa23.62■■□□□ 1.37
R3HDM4-202ENST00000586080 TNFRSF10AO00220 468 aa23.61■■□□□ 1.37
R3HDM4-202ENST00000586080 TULP1O00294 542 aaPredicted RBP23.61■■□□□ 1.37
R3HDM4-202ENST00000586080 PODXLO00592 558 aa23.61■■□□□ 1.37
R3HDM4-202ENST00000586080 LILRB3O75022 631 aa23.61■■□□□ 1.37
R3HDM4-202ENST00000586080 PRPF6O94906 941 aaKnown RBP23.61■■□□□ 1.37
R3HDM4-202ENST00000586080 ADH1AP07327 375 aa23.61■■□□□ 1.37
R3HDM4-202ENST00000586080 CMA1P23946 247 aa23.61■■□□□ 1.37
R3HDM4-202ENST00000586080 ELAVL2Q12926 359 aaKnown RBP23.61■■□□□ 1.37
R3HDM4-202ENST00000586080 ENOX2Q16206 610 aaKnown RBP23.61■■□□□ 1.37
R3HDM4-202ENST00000586080 UPP1Q16831 310 aa23.61■■□□□ 1.37
R3HDM4-202ENST00000586080 KIAA0319Q5VV43 1072 aa23.61■■□□□ 1.37
R3HDM4-202ENST00000586080 DCLRE1AQ6PJP8 1040 aa23.61■■□□□ 1.37
R3HDM4-202ENST00000586080 STXBP4Q6ZWJ1 553 aa23.61■■□□□ 1.37
R3HDM4-202ENST00000586080 GLYCTKQ8IVS8 523 aa23.61■■□□□ 1.37
R3HDM4-202ENST00000586080 GRAMD1CQ8IYS0 662 aa23.61■■□□□ 1.37
R3HDM4-202ENST00000586080 C7orf25Q9BPX7 421 aa23.61■■□□□ 1.37
R3HDM4-202ENST00000586080 STRA6Q9BX79 667 aa23.61■■□□□ 1.37
R3HDM4-202ENST00000586080 PLEKHA5Q9HAU0 1116 aa23.61■■□□□ 1.37
R3HDM4-202ENST00000586080 CHST7Q9NS84 486 aa23.61■■□□□ 1.37
R3HDM4-202ENST00000586080 TUBGCP4Q9UGJ1 667 aa23.61■■□□□ 1.37
R3HDM4-202ENST00000586080 AGO2Q9UKV8 859 aaKnown RBP23.61■■□□□ 1.37
R3HDM4-202ENST00000586080 TCF20Q9UGU0 1960 aaKnown RBP23.6■■□□□ 1.37
R3HDM4-202ENST00000586080 CUL9Q8IWT3 2517 aa23.6■■□□□ 1.37
R3HDM4-202ENST00000586080 TEX28O15482 410 aa23.6■■□□□ 1.37
R3HDM4-202ENST00000586080 FAM189A1O60320 539 aa23.6■■□□□ 1.37
R3HDM4-202ENST00000586080 SSTR3P32745 418 aaPredicted RBP23.6■■□□□ 1.37
R3HDM4-202ENST00000586080 ACOT2P49753 483 aa23.6■■□□□ 1.37
R3HDM4-202ENST00000586080 SMAD2Q15796 467 aaKnown RBP23.6■■□□□ 1.37
R3HDM4-202ENST00000586080 RTP2Q5QGT7 225 aa23.6■■□□□ 1.37
R3HDM4-202ENST00000586080 DDX27Q96GQ7 796 aaKnown RBP23.6■■□□□ 1.37
R3HDM4-202ENST00000586080 TTPALQ9BTX7 342 aa23.6■■□□□ 1.37
R3HDM4-202ENST00000586080 DZANK1Q9NVP4 752 aa23.6■■□□□ 1.37
R3HDM4-202ENST00000586080 TTC26A0AVF1 554 aa23.59■■□□□ 1.37
R3HDM4-202ENST00000586080 LACTBL1A8MY62 500 aa23.59■■□□□ 1.37
R3HDM4-202ENST00000586080 TMEM189-UBE2V1I3L0A0 370 aa23.59■■□□□ 1.37
R3HDM4-202ENST00000586080 SLFN14P0C7P3 912 aa23.59■■□□□ 1.37
R3HDM4-202ENST00000586080 HOXB8P17481 243 aaPredicted RBP23.59■■□□□ 1.37
R3HDM4-202ENST00000586080 RPL17P18621 184 aaKnown RBP23.59■■□□□ 1.37
R3HDM4-202ENST00000586080 IGFBP6P24592 240 aaPredicted RBP23.59■■□□□ 1.37
R3HDM4-202ENST00000586080 CLCN4P51793 760 aa23.59■■□□□ 1.37
R3HDM4-202ENST00000586080 FAM26FQ5R3K3 315 aa23.59■■□□□ 1.37
R3HDM4-202ENST00000586080 SYCE2Q6PIF2 218 aa23.59■■□□□ 1.37
R3HDM4-202ENST00000586080 PRSS55Q6UWB4 352 aaPredicted RBP23.59■■□□□ 1.37
R3HDM4-202ENST00000586080 FSIP1Q8NA03 581 aa23.59■■□□□ 1.37
R3HDM4-202ENST00000586080 C3orf58Q8NDZ4 430 aa23.59■■□□□ 1.37
R3HDM4-202ENST00000586080 GLIS3Q8NEA6 775 aa23.59■■□□□ 1.37
R3HDM4-202ENST00000586080 SLC22A17Q8WUG5 538 aa23.59■■□□□ 1.37
R3HDM4-202ENST00000586080 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP23.59■■□□□ 1.374e-7■■□□□ 11.8
R3HDM4-202ENST00000586080 CPSF3Q9UKF6 684 aaKnown RBP23.59■■□□□ 1.37
R3HDM4-202ENST00000586080 NUB1Q9Y5A7 615 aa23.59■■□□□ 1.37
R3HDM4-202ENST00000586080 I3L4J1 428 aa23.58■■□□□ 1.37
R3HDM4-202ENST00000586080 ACTN4O43707 911 aaKnown RBP23.58■■□□□ 1.37
R3HDM4-202ENST00000586080 SYKP43405 635 aa23.58■■□□□ 1.37
R3HDM4-202ENST00000586080 BRCC3P46736 316 aa23.58■■□□□ 1.37
R3HDM4-202ENST00000586080 CREMQ03060 361 aa23.58■■□□□ 1.37
R3HDM4-202ENST00000586080 CUL4BQ13620 913 aa23.58■■□□□ 1.37
R3HDM4-202ENST00000586080 POSTNQ15063 836 aa23.58■■□□□ 1.37
R3HDM4-202ENST00000586080 RARS2Q5T160 578 aaKnown RBP23.58■■□□□ 1.37
R3HDM4-202ENST00000586080 CNNM4Q6P4Q7 775 aa23.58■■□□□ 1.37
R3HDM4-202ENST00000586080 UNC13DQ70J99 1090 aa23.58■■□□□ 1.37
R3HDM4-202ENST00000586080 C12orf76Q8N812 135 aaPredicted RBP23.58■■□□□ 1.37
R3HDM4-202ENST00000586080 NOC3LQ8WTT2 800 aaKnown RBP23.58■■□□□ 1.37
Retrieved 100 of 20,778 RNA–protein pairs in 48.4 ms