RNA–Protein interactions for RNA: ENST00000585333.1

TRIM47-202, Transcript of tripartite motif containing 47, humanhuman

TSL 3

Gene TRIM47, Length 595 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM47-202ENST00000585333 LRRIQ3A6PVS8 624 aaPredicted RBP13.98□□□□□ -0.17
TRIM47-202ENST00000585333 LACTBL1A8MY62 500 aa13.98□□□□□ -0.17
TRIM47-202ENST00000585333 MGEA5O60502 916 aa13.98□□□□□ -0.17
TRIM47-202ENST00000585333 ATP1A3P13637 1013 aa13.98□□□□□ -0.17
TRIM47-202ENST00000585333 P4HA1P13674 534 aa13.98□□□□□ -0.17
TRIM47-202ENST00000585333 ATICP31939 592 aa13.98□□□□□ -0.17
TRIM47-202ENST00000585333 PNPLA4P41247 253 aa13.98□□□□□ -0.17
TRIM47-202ENST00000585333 TNFSF9P41273 254 aa13.98□□□□□ -0.17
TRIM47-202ENST00000585333 TFAMQ00059 246 aaKnown RBP13.98□□□□□ -0.17
TRIM47-202ENST00000585333 BIRC3Q13489 604 aa13.98□□□□□ -0.17
TRIM47-202ENST00000585333 TRPC3Q13507 836 aa13.98□□□□□ -0.17
TRIM47-202ENST00000585333 GPNMBQ14956 572 aa13.98□□□□□ -0.17
TRIM47-202ENST00000585333 WDR44Q5JSH3 913 aa13.98□□□□□ -0.17
TRIM47-202ENST00000585333 ALKAL1Q6UXT8 129 aa13.98□□□□□ -0.17
TRIM47-202ENST00000585333 ZNF598Q86UK7 904 aaKnown RBP13.98□□□□□ -0.17
TRIM47-202ENST00000585333 CEP120Q8N960 986 aa13.98□□□□□ -0.17
TRIM47-202ENST00000585333 RNF169Q8NCN4 708 aa13.98□□□□□ -0.17
TRIM47-202ENST00000585333 FBXL13Q8NEE6 735 aa13.98□□□□□ -0.17
TRIM47-202ENST00000585333 PHOSPHO2Q8TCD6 241 aa13.98□□□□□ -0.17
TRIM47-202ENST00000585333 BADQ92934 168 aa13.98□□□□□ -0.17
TRIM47-202ENST00000585333 KIF12Q96FN5 646 aa13.98□□□□□ -0.17
TRIM47-202ENST00000585333 DDX27Q96GQ7 796 aaKnown RBP13.98□□□□□ -0.17
TRIM47-202ENST00000585333 ERGIC2Q96RQ1 377 aa13.98□□□□□ -0.17
TRIM47-202ENST00000585333 SLC9A7Q96T83 725 aa13.98□□□□□ -0.17
TRIM47-202ENST00000585333 NUP58Q9BVL2 599 aa13.98□□□□□ -0.17
TRIM47-202ENST00000585333 TMEM117Q9H0C3 514 aa13.98□□□□□ -0.17
TRIM47-202ENST00000585333 VPS16Q9H269 839 aa13.98□□□□□ -0.17
TRIM47-202ENST00000585333 FAM124BQ9H5Z6 455 aaPredicted RBP13.98□□□□□ -0.17
TRIM47-202ENST00000585333 RTN4Q9NQC3 1192 aaKnown RBP13.98□□□□□ -0.17
TRIM47-202ENST00000585333 IFNKQ9P0W0 207 aa13.98□□□□□ -0.17
TRIM47-202ENST00000585333 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP13.98□□□□□ -0.17
TRIM47-202ENST00000585333 RALGAPA2Q2PPJ7 1873 aa13.97□□□□□ -0.17
TRIM47-202ENST00000585333 TULP1O00294 542 aaPredicted RBP13.97□□□□□ -0.17
TRIM47-202ENST00000585333 CDC25BP30305 580 aa13.97□□□□□ -0.17
TRIM47-202ENST00000585333 RPL9P32969 192 aaKnown RBP13.97□□□□□ -0.17
TRIM47-202ENST00000585333 RBP5P82980 135 aa13.97□□□□□ -0.17
TRIM47-202ENST00000585333 MYO1EQ12965 1108 aa13.97□□□□□ -0.17
TRIM47-202ENST00000585333 EXOC3L4Q17RC7 722 aa13.97□□□□□ -0.17
TRIM47-202ENST00000585333 ZACNQ401N2 412 aa13.97□□□□□ -0.17
TRIM47-202ENST00000585333 NOMO2Q5JPE7 1267 aa13.97□□□□□ -0.17
TRIM47-202ENST00000585333 PCMTD1Q96MG8 357 aaPredicted RBP13.97□□□□□ -0.17
TRIM47-202ENST00000585333 ZNF560Q96MR9 790 aa13.97□□□□□ -0.17
TRIM47-202ENST00000585333 FAM193BQ96PV7 902 aaPredicted RBP13.97□□□□□ -0.17
TRIM47-202ENST00000585333 COQ4Q9Y3A0 265 aa13.97□□□□□ -0.17
TRIM47-202ENST00000585333 ITIH6Q6UXX5 1313 aa13.96□□□□□ -0.17
TRIM47-202ENST00000585333 PDE4DIPQ5VU43 2346 aa13.96□□□□□ -0.17
TRIM47-202ENST00000585333 SMIM28A0A1B0GU29 152 aa13.96□□□□□ -0.17
TRIM47-202ENST00000585333 ARL5CA6NH57 179 aa13.96□□□□□ -0.17
TRIM47-202ENST00000585333 TRIM49P0CI25 452 aa13.96□□□□□ -0.17
TRIM47-202ENST00000585333 TRIM49CP0CI26 452 aa13.96□□□□□ -0.17
TRIM47-202ENST00000585333 TRIM21P19474 475 aaKnown RBP13.96□□□□□ -0.17
TRIM47-202ENST00000585333 AKAP5P24588 427 aa13.96□□□□□ -0.17
TRIM47-202ENST00000585333 MLH1P40692 756 aa13.96□□□□□ -0.17
TRIM47-202ENST00000585333 PIK3CAP42336 1068 aa13.96□□□□□ -0.17
TRIM47-202ENST00000585333 RNASELQ05823 741 aaKnown RBP13.96□□□□□ -0.17
TRIM47-202ENST00000585333 NR1I3Q14994 352 aa13.96□□□□□ -0.17
TRIM47-202ENST00000585333 SGSM1Q2NKQ1 1148 aa13.96□□□□□ -0.17
TRIM47-202ENST00000585333 SEZ6Q53EL9 994 aa13.96□□□□□ -0.17
TRIM47-202ENST00000585333 MIIPQ5JXC2 388 aa13.96□□□□□ -0.17
TRIM47-202ENST00000585333 ZBTB41Q5SVQ8 909 aa13.96□□□□□ -0.17
TRIM47-202ENST00000585333 JADE1Q6IE81 842 aa13.96□□□□□ -0.17
TRIM47-202ENST00000585333 AGMOQ6ZNB7 445 aa13.96□□□□□ -0.17
TRIM47-202ENST00000585333 SV2AQ7L0J3 742 aa13.96□□□□□ -0.17
TRIM47-202ENST00000585333 ENOSF1Q7L5Y1 443 aa13.96□□□□□ -0.17
TRIM47-202ENST00000585333 LRRC43Q8N309 656 aa13.96□□□□□ -0.17
TRIM47-202ENST00000585333 TTC39CQ8N584 583 aa13.96□□□□□ -0.17
TRIM47-202ENST00000585333 LRRC52Q8N7C0 313 aa13.96□□□□□ -0.17
TRIM47-202ENST00000585333 HERVK_113Q902F9 699 aa13.96□□□□□ -0.17
TRIM47-202ENST00000585333 XPO4Q9C0E2 1151 aaKnown RBP13.96□□□□□ -0.17
TRIM47-202ENST00000585333 GCNT4Q9P109 453 aa13.96□□□□□ -0.17
TRIM47-202ENST00000585333 STK39Q9UEW8 545 aa13.96□□□□□ -0.17
TRIM47-202ENST00000585333 HES2Q9Y543 173 aa13.96□□□□□ -0.17
TRIM47-202ENST00000585333 CITO14578 2027 aa13.96□□□□□ -0.17
TRIM47-202ENST00000585333 ZBBXA8MT70 800 aa13.95□□□□□ -0.18
TRIM47-202ENST00000585333 STAU1O95793 577 aaKnown RBP13.95□□□□□ -0.18
TRIM47-202ENST00000585333 ITGB8P26012 769 aa13.95□□□□□ -0.18
TRIM47-202ENST00000585333 GCLMP48507 274 aa13.95□□□□□ -0.18
TRIM47-202ENST00000585333 WDR5P61964 334 aaKnown RBP13.95□□□□□ -0.18
TRIM47-202ENST00000585333 YWHAEP62258 255 aaKnown RBP13.95□□□□□ -0.18
TRIM47-202ENST00000585333 SPECC1LQ69YQ0 1117 aa13.95□□□□□ -0.18
TRIM47-202ENST00000585333 APTXQ7Z2E3 356 aaKnown RBP13.95□□□□□ -0.18
TRIM47-202ENST00000585333 TRAPPC11Q7Z392 1133 aa13.95□□□□□ -0.18
TRIM47-202ENST00000585333 RTN4RL1Q86UN2 441 aaPredicted RBP13.95□□□□□ -0.18
TRIM47-202ENST00000585333 TMEM192Q8IY95 271 aa13.95□□□□□ -0.18
TRIM47-202ENST00000585333 ZNF397Q8NF99 534 aaPredicted RBP13.95□□□□□ -0.18
TRIM47-202ENST00000585333 NEK11Q8NG66 645 aa13.95□□□□□ -0.18
TRIM47-202ENST00000585333 LINC01599Q8WXQ3 324 aa13.95□□□□□ -0.18
TRIM47-202ENST00000585333 TOP1MTQ969P6 601 aa13.95□□□□□ -0.18
TRIM47-202ENST00000585333 JAKMIP2Q96AA8 810 aa13.95□□□□□ -0.18
TRIM47-202ENST00000585333 GAD1Q99259 594 aa13.95□□□□□ -0.18
TRIM47-202ENST00000585333 EDEM3Q9BZQ6 932 aa13.95□□□□□ -0.18
TRIM47-202ENST00000585333 MTMR12Q9C0I1 747 aa13.95□□□□□ -0.18
TRIM47-202ENST00000585333 NUCKS1Q9H1E3 243 aaKnown RBP13.95□□□□□ -0.18
TRIM47-202ENST00000585333 PLCB1Q9NQ66 1216 aa13.95□□□□□ -0.18
TRIM47-202ENST00000585333 RAB20Q9NX57 234 aa13.95□□□□□ -0.18
TRIM47-202ENST00000585333 DPP3Q9NY33 737 aa13.95□□□□□ -0.18
TRIM47-202ENST00000585333 ZMYND8Q9ULU4 1186 aaPredicted RBP13.95□□□□□ -0.18
TRIM47-202ENST00000585333 SLC4A7Q9Y6M7 1214 aa13.95□□□□□ -0.18
TRIM47-202ENST00000585333 ALPK3Q96L96 1907 aa13.94□□□□□ -0.18
TRIM47-202ENST00000585333 LOC101059915A0A1B0GWI6 518 aaPredicted RBP13.94□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 17.5 ms