RNA–Protein interactions for RNA: ENST00000585163.5

CDK5RAP3-237, Transcript of CDK5 regulatory subunit associated protein 3, humanhuman

TSL 1 (best)

Gene CDK5RAP3, Length 2,519 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP3-237ENST00000585163 MAIP1Q8WWC4 291 aa15.16■□□□□ 0.02
CDK5RAP3-237ENST00000585163 ARHGEF2Q92974 986 aaKnown RBP15.16■□□□□ 0.02
CDK5RAP3-237ENST00000585163 FAM81BQ96LP2 452 aa15.16■□□□□ 0.02
CDK5RAP3-237ENST00000585163 GMLQ99445 158 aa15.16■□□□□ 0.02
CDK5RAP3-237ENST00000585163 NTPCRQ9BSD7 190 aaKnown RBP15.16■□□□□ 0.02
CDK5RAP3-237ENST00000585163 VEZTQ9HBM0 779 aa15.16■□□□□ 0.02
CDK5RAP3-237ENST00000585163 AVENQ9NQS1 362 aaPredicted RBP15.16■□□□□ 0.02
CDK5RAP3-237ENST00000585163 MAP3K20Q9NYL2 800 aaKnown RBP15.16■□□□□ 0.02
CDK5RAP3-237ENST00000585163 PLSCR1O15162 318 aa15.15■□□□□ 0.02
CDK5RAP3-237ENST00000585163 TTC4O95801 387 aa15.15■□□□□ 0.02
CDK5RAP3-237ENST00000585163 KRT5P13647 590 aa15.15■□□□□ 0.02
CDK5RAP3-237ENST00000585163 EIF2AK2P19525 551 aaKnown RBP15.15■□□□□ 0.02
CDK5RAP3-237ENST00000585163 CHKAP35790 457 aa15.15■□□□□ 0.02
CDK5RAP3-237ENST00000585163 SLC1A1P43005 524 aa15.15■□□□□ 0.02
CDK5RAP3-237ENST00000585163 PGM5Q15124 567 aa15.15■□□□□ 0.02
CDK5RAP3-237ENST00000585163 ANO5Q75V66 913 aa15.15■□□□□ 0.02
CDK5RAP3-237ENST00000585163 MCOLN2Q8IZK6 566 aa15.15■□□□□ 0.02
CDK5RAP3-237ENST00000585163 ELMO3Q96BJ8 720 aa15.15■□□□□ 0.02
CDK5RAP3-237ENST00000585163 TAAR1Q96RJ0 339 aa15.15■□□□□ 0.02
CDK5RAP3-237ENST00000585163 KMT5AQ9NQR1 393 aa15.15■□□□□ 0.02
CDK5RAP3-237ENST00000585163 TPX2Q9ULW0 747 aaKnown RBP15.15■□□□□ 0.02
CDK5RAP3-237ENST00000585163 MROH7Q68CQ1 1323 aa15.15■□□□□ 0.02
CDK5RAP3-237ENST00000585163 SNX3O60493 162 aa15.15■□□□□ 0.02
CDK5RAP3-237ENST00000585163 ATP5DP30049 168 aa15.15■□□□□ 0.02
CDK5RAP3-237ENST00000585163 TMEM132AQ24JP5 1023 aa15.15■□□□□ 0.02
CDK5RAP3-237ENST00000585163 CPXCR1Q8N123 301 aa15.15■□□□□ 0.02
CDK5RAP3-237ENST00000585163 OGFOD1Q8N543 542 aa15.15■□□□□ 0.02
CDK5RAP3-237ENST00000585163 GRK7Q8WTQ7 553 aa15.15■□□□□ 0.02
CDK5RAP3-237ENST00000585163 SPIRE2Q8WWL2 714 aa15.15■□□□□ 0.02
CDK5RAP3-237ENST00000585163 ATG4AQ8WYN0 398 aa15.15■□□□□ 0.02
CDK5RAP3-237ENST00000585163 TRIM7Q9C029 511 aa15.15■□□□□ 0.02
CDK5RAP3-237ENST00000585163 TMEM120BA0PK00 339 aa15.14■□□□□ 0.01
CDK5RAP3-237ENST00000585163 ZC3H11AO75152 810 aaKnown RBP eCLIP15.14■□□□□ 0.016e-7■■■□□ 17.4
CDK5RAP3-237ENST00000585163 GAS8O95995 478 aa15.14■□□□□ 0.01
CDK5RAP3-237ENST00000585163 OAS1P00973 400 aaKnown RBP15.14■□□□□ 0.01
CDK5RAP3-237ENST00000585163 RPS6P62753 249 aaKnown RBP15.14■□□□□ 0.01
CDK5RAP3-237ENST00000585163 KRT76Q01546 638 aa15.14■□□□□ 0.01
CDK5RAP3-237ENST00000585163 CAV1Q03135 178 aa15.14■□□□□ 0.01
CDK5RAP3-237ENST00000585163 ENPEPQ07075 957 aa15.14■□□□□ 0.01
CDK5RAP3-237ENST00000585163 NBPF9Q3BBW0 867 aa15.14■□□□□ 0.01
CDK5RAP3-237ENST00000585163 PREPLQ4J6C6 727 aaPredicted RBP15.14■□□□□ 0.01
CDK5RAP3-237ENST00000585163 WLSQ5T9L3 541 aa15.14■□□□□ 0.01
CDK5RAP3-237ENST00000585163 VSTM1Q6UX27 236 aa15.14■□□□□ 0.01
CDK5RAP3-237ENST00000585163 OTUD6AQ7L8S5 288 aa15.14■□□□□ 0.01
CDK5RAP3-237ENST00000585163 BSNDQ8WZ55 320 aa15.14■□□□□ 0.01
CDK5RAP3-237ENST00000585163 POMGNT1Q8WZA1 660 aa15.14■□□□□ 0.01
CDK5RAP3-237ENST00000585163 HERPUD2Q9BSE4 406 aa15.14■□□□□ 0.01
CDK5RAP3-237ENST00000585163 ZNF341Q9BYN7 854 aa15.14■□□□□ 0.01
CDK5RAP3-237ENST00000585163 DCLK3Q9C098 648 aa15.14■□□□□ 0.01
CDK5RAP3-237ENST00000585163 C17orf75Q9HAS0 396 aa15.14■□□□□ 0.01
CDK5RAP3-237ENST00000585163 HOMER2Q9NSB8 354 aa15.14■□□□□ 0.01
CDK5RAP3-237ENST00000585163 SBDSQ9Y3A5 250 aaKnown RBP eCLIP15.14■□□□□ 0.01
CDK5RAP3-237ENST00000585163 RGPD3A6NKT7 1758 aaPredicted RBP15.14■□□□□ 0.01
CDK5RAP3-237ENST00000585163 RGPD4Q7Z3J3 1758 aa15.14■□□□□ 0.01
CDK5RAP3-237ENST00000585163 TCEA3O75764 348 aa15.14■□□□□ 0.01
CDK5RAP3-237ENST00000585163 CALCAP01258 141 aa15.14■□□□□ 0.01
CDK5RAP3-237ENST00000585163 MYBL1P10243 752 aa15.14■□□□□ 0.01
CDK5RAP3-237ENST00000585163 ITGA8P53708 1063 aa15.14■□□□□ 0.01
CDK5RAP3-237ENST00000585163 ELF3P78545 371 aaPredicted RBP15.14■□□□□ 0.01
CDK5RAP3-237ENST00000585163 SF3A3Q12874 501 aaKnown RBP eCLIP15.14■□□□□ 0.011e-6■■■□□ 15.1
CDK5RAP3-237ENST00000585163 FAM83AQ86UY5 434 aa15.14■□□□□ 0.01
CDK5RAP3-237ENST00000585163 SAMD3Q8N6K7 520 aa15.14■□□□□ 0.01
CDK5RAP3-237ENST00000585163 DYDC1Q8WWB3 177 aa15.14■□□□□ 0.01
CDK5RAP3-237ENST00000585163 DDX27Q96GQ7 796 aaKnown RBP15.14■□□□□ 0.01
CDK5RAP3-237ENST00000585163 PI4K2AQ9BTU6 479 aa15.14■□□□□ 0.01
CDK5RAP3-237ENST00000585163 TRAIPQ9BWF2 469 aa15.14■□□□□ 0.01
CDK5RAP3-237ENST00000585163 SLC38A10Q9HBR0 1119 aa15.14■□□□□ 0.01
CDK5RAP3-237ENST00000585163 RAVER2Q9HCJ3 691 aaKnown RBP15.14■□□□□ 0.01
CDK5RAP3-237ENST00000585163 TCEAL9Q9UHQ7 104 aa15.14■□□□□ 0.01
CDK5RAP3-237ENST00000585163 MYPNQ86TC9 1320 aa15.14■□□□□ 0.01
CDK5RAP3-237ENST00000585163 WDR46O15213 610 aaKnown RBP15.13■□□□□ 0.01
CDK5RAP3-237ENST00000585163 RAD17O75943 681 aa15.13■□□□□ 0.01
CDK5RAP3-237ENST00000585163 MYCLP12524 364 aaPredicted RBP15.13■□□□□ 0.01
CDK5RAP3-237ENST00000585163 CREB1P16220 341 aa15.13■□□□□ 0.01
CDK5RAP3-237ENST00000585163 RRM1P23921 792 aa15.13■□□□□ 0.01
CDK5RAP3-237ENST00000585163 MAP2K2P36507 400 aa15.13■□□□□ 0.01
CDK5RAP3-237ENST00000585163 MAP3K10Q02779 954 aa15.13■□□□□ 0.01
CDK5RAP3-237ENST00000585163 PTP4A2Q12974 167 aa15.13■□□□□ 0.01
CDK5RAP3-237ENST00000585163 LRRC14Q15048 493 aa15.13■□□□□ 0.01
CDK5RAP3-237ENST00000585163 ZNF677Q86XU0 584 aa15.13■□□□□ 0.01
CDK5RAP3-237ENST00000585163 GPD1LQ8N335 351 aa15.13■□□□□ 0.01
CDK5RAP3-237ENST00000585163 ATL2Q8NHH9 583 aa15.13■□□□□ 0.01
CDK5RAP3-237ENST00000585163 TRIM11Q96F44 468 aa15.13■□□□□ 0.01
CDK5RAP3-237ENST00000585163 TACO1Q9BSH4 297 aaKnown RBP15.13■□□□□ 0.01
CDK5RAP3-237ENST00000585163 PGAP2Q9UHJ9 254 aa15.13■□□□□ 0.01
CDK5RAP3-237ENST00000585163 PCDHB2Q9Y5E7 798 aa15.13■□□□□ 0.01
CDK5RAP3-237ENST00000585163 KLF1Q13351 362 aaPredicted RBP15.13■□□□□ 0.01
CDK5RAP3-237ENST00000585163 KYNUQ16719 465 aa15.13■□□□□ 0.01
CDK5RAP3-237ENST00000585163 HIBCHQ6NVY1 386 aaPredicted RBP15.13■□□□□ 0.01
CDK5RAP3-237ENST00000585163 C15orf39Q6ZRI6 1047 aa15.13■□□□□ 0.01
CDK5RAP3-237ENST00000585163 CEP120Q8N960 986 aa15.13■□□□□ 0.01
CDK5RAP3-237ENST00000585163 CPA5Q8WXQ8 436 aa15.13■□□□□ 0.01
CDK5RAP3-237ENST00000585163 MYCBPQ99417 103 aaPredicted RBP15.13■□□□□ 0.01
CDK5RAP3-237ENST00000585163 PDCD2LQ9BRP1 358 aa15.13■□□□□ 0.01
CDK5RAP3-237ENST00000585163 NEU2Q9Y3R4 380 aa15.13■□□□□ 0.01
CDK5RAP3-237ENST00000585163 SORBS3O60504 671 aa15.12■□□□□ 0.01
CDK5RAP3-237ENST00000585163 ATF2P15336 505 aa15.12■□□□□ 0.01
CDK5RAP3-237ENST00000585163 CENPCQ03188 943 aa15.12■□□□□ 0.01
CDK5RAP3-237ENST00000585163 TRIP13Q15645 432 aaPredicted RBP15.12■□□□□ 0.01
CDK5RAP3-237ENST00000585163 BRDTQ58F21 947 aaPredicted RBP15.12■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 21.3 ms