RNA–Protein interactions for RNA: ENST00000584908.5

ERBB2-222, Transcript of erb-b2 receptor tyrosine kinase 2, humanhuman

TSL 1 (best)

Gene ERBB2, Length 1,316 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERBB2-222ENST00000584908 TNFSF9P41273 254 aa17.72■□□□□ 0.43
ERBB2-222ENST00000584908 AFMP43652 599 aa17.72■□□□□ 0.43
ERBB2-222ENST00000584908 DSG1Q02413 1049 aa17.72■□□□□ 0.43
ERBB2-222ENST00000584908 SOX4Q06945 474 aaPredicted RBP17.72■□□□□ 0.43
ERBB2-222ENST00000584908 DLX2Q07687 328 aaPredicted RBP17.72■□□□□ 0.43
ERBB2-222ENST00000584908 CUL4BQ13620 913 aa17.72■□□□□ 0.43
ERBB2-222ENST00000584908 ZBTB6Q15916 424 aa17.72■□□□□ 0.43
ERBB2-222ENST00000584908 ENOX2Q16206 610 aaKnown RBP17.72■□□□□ 0.43
ERBB2-222ENST00000584908 UPP1Q16831 310 aa17.72■□□□□ 0.43
ERBB2-222ENST00000584908 FAM26FQ5R3K3 315 aa17.72■□□□□ 0.43
ERBB2-222ENST00000584908 KIAA0319Q5VV43 1072 aa17.72■□□□□ 0.43
ERBB2-222ENST00000584908 STXBP4Q6ZWJ1 553 aa17.72■□□□□ 0.43
ERBB2-222ENST00000584908 TAS1R1Q7RTX1 841 aa17.72■□□□□ 0.43
ERBB2-222ENST00000584908 CD302Q8IX05 232 aa17.72■□□□□ 0.43
ERBB2-222ENST00000584908 FSIP1Q8NA03 581 aa17.72■□□□□ 0.43
ERBB2-222ENST00000584908 VN1R2Q8NFZ6 395 aa17.72■□□□□ 0.43
ERBB2-222ENST00000584908 GADD45GIP1Q8TAE8 222 aaPredicted RBP17.72■□□□□ 0.43
ERBB2-222ENST00000584908 MSLNLQ96KJ4 702 aa17.72■□□□□ 0.43
ERBB2-222ENST00000584908 GPR62Q9BZJ7 368 aa17.72■□□□□ 0.43
ERBB2-222ENST00000584908 IKZF4Q9H2S9 585 aa17.72■□□□□ 0.43
ERBB2-222ENST00000584908 GOLPH3LQ9H4A5 285 aa17.72■□□□□ 0.43
ERBB2-222ENST00000584908 TMEM206Q9H813 350 aa17.72■□□□□ 0.43
ERBB2-222ENST00000584908 CLEC1BQ9P126 229 aa17.72■□□□□ 0.43
ERBB2-222ENST00000584908 CACNG4Q9UBN1 327 aa17.72■□□□□ 0.43
ERBB2-222ENST00000584908 SSX2IPQ9Y2D8 614 aa17.72■□□□□ 0.43
ERBB2-222ENST00000584908 TCF20Q9UGU0 1960 aaKnown RBP17.71■□□□□ 0.43
ERBB2-222ENST00000584908 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP17.71■□□□□ 0.42
ERBB2-222ENST00000584908 KLRC4O43908 158 aa17.71■□□□□ 0.42
ERBB2-222ENST00000584908 GARTP22102 1010 aa17.71■□□□□ 0.42
ERBB2-222ENST00000584908 GLUD2P49448 558 aa17.71■□□□□ 0.42
ERBB2-222ENST00000584908 KCNQ1P51787 676 aa17.71■□□□□ 0.42
ERBB2-222ENST00000584908 CLCNKBP51801 687 aa17.71■□□□□ 0.42
ERBB2-222ENST00000584908 PUS10Q3MIT2 529 aaKnown RBP17.71■□□□□ 0.42
ERBB2-222ENST00000584908 ZBTB41Q5SVQ8 909 aa17.71■□□□□ 0.42
ERBB2-222ENST00000584908 DCLRE1AQ6PJP8 1040 aa17.71■□□□□ 0.42
ERBB2-222ENST00000584908 CD300LGQ6UXG3 332 aa17.71■□□□□ 0.42
ERBB2-222ENST00000584908 GRAMD1CQ8IYS0 662 aa17.71■□□□□ 0.42
ERBB2-222ENST00000584908 GLIS3Q8NEA6 775 aa17.71■□□□□ 0.42
ERBB2-222ENST00000584908 ZNF507Q8TCN5 953 aa17.71■□□□□ 0.42
ERBB2-222ENST00000584908 AUTS2Q8WXX7 1259 aa17.71■□□□□ 0.42
ERBB2-222ENST00000584908 RABGGTAQ92696 567 aa17.71■□□□□ 0.42
ERBB2-222ENST00000584908 HPS3Q969F9 1004 aa17.71■□□□□ 0.42
ERBB2-222ENST00000584908 DDX27Q96GQ7 796 aaKnown RBP17.71■□□□□ 0.42
ERBB2-222ENST00000584908 BLZF1Q9H2G9 400 aa17.71■□□□□ 0.42
ERBB2-222ENST00000584908 MRPL17Q9NRX2 175 aaKnown RBP17.71■□□□□ 0.42
ERBB2-222ENST00000584908 AGO2Q9UKV8 859 aaKnown RBP17.71■□□□□ 0.42
ERBB2-222ENST00000584908 SF3B1O75533 1304 aaKnown RBP eCLIP17.7■□□□□ 0.42
ERBB2-222ENST00000584908 C5orf42Q9H799 3197 aa17.7■□□□□ 0.42
ERBB2-222ENST00000584908 CLASP2O75122 1294 aaKnown RBP17.7■□□□□ 0.42
ERBB2-222ENST00000584908 TADA2AO75478 443 aa17.7■□□□□ 0.42
ERBB2-222ENST00000584908 PRPF6O94906 941 aaKnown RBP17.7■□□□□ 0.42
ERBB2-222ENST00000584908 URODP06132 367 aa17.7■□□□□ 0.42
ERBB2-222ENST00000584908 RPL9P32969 192 aaKnown RBP17.7■□□□□ 0.42
ERBB2-222ENST00000584908 HOXD13P35453 343 aa17.7■□□□□ 0.42
ERBB2-222ENST00000584908 ANP32AP39687 249 aaKnown RBP17.7■□□□□ 0.42
ERBB2-222ENST00000584908 PPP2R3AQ06190 1150 aa17.7■□□□□ 0.42
ERBB2-222ENST00000584908 ELAVL2Q12926 359 aaKnown RBP17.7■□□□□ 0.42
ERBB2-222ENST00000584908 USP41Q3LFD5 358 aa17.7■□□□□ 0.42
ERBB2-222ENST00000584908 CRELD2Q6UXH1 353 aaPredicted RBP17.7■□□□□ 0.42
ERBB2-222ENST00000584908 RPF1Q9H9Y2 349 aaKnown RBP17.7■□□□□ 0.42
ERBB2-222ENST00000584908 GOLGA2P5Q9HBQ8 144 aa17.7■□□□□ 0.42
ERBB2-222ENST00000584908 RXFP1Q9HBX9 757 aa17.7■□□□□ 0.42
ERBB2-222ENST00000584908 UBE4BO95155 1302 aa17.69■□□□□ 0.42
ERBB2-222ENST00000584908 MTCL1Q9Y4B5 1905 aaKnown RBP17.69■□□□□ 0.42
ERBB2-222ENST00000584908 LACTBL1A8MY62 500 aa17.69■□□□□ 0.42
ERBB2-222ENST00000584908 H3BQ06 376 aaPredicted RBP17.69■□□□□ 0.42
ERBB2-222ENST00000584908 ZNF202O95125 648 aa17.69■□□□□ 0.42
ERBB2-222ENST00000584908 C1RP00736 705 aa17.69■□□□□ 0.42
ERBB2-222ENST00000584908 CYP3A5P20815 502 aa17.69■□□□□ 0.42
ERBB2-222ENST00000584908 NDUFV1P49821 464 aa17.69■□□□□ 0.42
ERBB2-222ENST00000584908 BMT2Q1RMZ1 405 aa17.69■□□□□ 0.42
ERBB2-222ENST00000584908 KRBA2Q6ZNG9 492 aa17.69■□□□□ 0.42
ERBB2-222ENST00000584908 SYCP3Q8IZU3 236 aa17.69■□□□□ 0.42
ERBB2-222ENST00000584908 C3orf58Q8NDZ4 430 aa17.69■□□□□ 0.42
ERBB2-222ENST00000584908 POMGNT1Q8WZA1 660 aa17.69■□□□□ 0.42
ERBB2-222ENST00000584908 C18orf25Q96B23 403 aaPredicted RBP17.69■□□□□ 0.42
ERBB2-222ENST00000584908 ASB7Q9H672 318 aa17.69■□□□□ 0.42
ERBB2-222ENST00000584908 DERAQ9Y315 318 aa17.69■□□□□ 0.42
ERBB2-222ENST00000584908 HCFC2Q9Y5Z7 792 aa17.69■□□□□ 0.42
ERBB2-222ENST00000584908 PLXNA3P51805 1871 aa17.68■□□□□ 0.42
ERBB2-222ENST00000584908 GRXCR2A6NFK2 248 aa17.68■□□□□ 0.42
ERBB2-222ENST00000584908 KIAA0391O15091 583 aaKnown RBP17.68■□□□□ 0.42
ERBB2-222ENST00000584908 LDHAP00338 332 aaKnown RBP17.68■□□□□ 0.42
ERBB2-222ENST00000584908 CNPP09543 421 aaKnown RBP17.68■□□□□ 0.42
ERBB2-222ENST00000584908 SRGAP2BP0DMP2 458 aa17.68■□□□□ 0.42
ERBB2-222ENST00000584908 LRPAP1P30533 357 aa17.68■□□□□ 0.42
ERBB2-222ENST00000584908 ACOT2P49753 483 aa17.68■□□□□ 0.42
ERBB2-222ENST00000584908 RBM10P98175 930 aaKnown RBP17.68■□□□□ 0.42
ERBB2-222ENST00000584908 PSMD2Q13200 908 aa17.68■□□□□ 0.42
ERBB2-222ENST00000584908 PPFIBP1Q86W92 1011 aa17.68■□□□□ 0.42
ERBB2-222ENST00000584908 SMRP1Q8NCR6 262 aa17.68■□□□□ 0.42
ERBB2-222ENST00000584908 SLC22A17Q8WUG5 538 aa17.68■□□□□ 0.42
ERBB2-222ENST00000584908 SCFD1Q8WVM8 642 aa17.68■□□□□ 0.42
ERBB2-222ENST00000584908 KLHL5Q96PQ7 755 aa17.68■□□□□ 0.42
ERBB2-222ENST00000584908 EMILIN2Q9BXX0 1053 aa17.68■□□□□ 0.42
ERBB2-222ENST00000584908 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP17.68■□□□□ 0.42
ERBB2-222ENST00000584908 FNIP2Q9P278 1114 aa17.68■□□□□ 0.42
ERBB2-222ENST00000584908 CD207Q9UJ71 328 aa17.68■□□□□ 0.42
ERBB2-222ENST00000584908 BARX2Q9UMQ3 279 aaPredicted RBP17.68■□□□□ 0.42
ERBB2-222ENST00000584908 UBQLN1Q9UMX0 589 aaKnown RBP17.68■□□□□ 0.42
Retrieved 100 of 20,778 RNA–protein pairs in 18.7 ms