RNA–Protein interactions for RNA: ENST00000584541.1

RFFL-211, Transcript of ring finger and FYVE like domain containing E3 ubiquitin protein ligase, humanhuman

TSL 4

Gene RFFL, Length 563 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFFL-211ENST00000584541 JADE1Q6IE81 842 aa19.83■□□□□ 0.77
RFFL-211ENST00000584541 ANKRD36BP1Q96IX9 119 aa19.83■□□□□ 0.77
RFFL-211ENST00000584541 ZFP42Q96MM3 310 aa19.83■□□□□ 0.77
RFFL-211ENST00000584541 SLC9A7Q96T83 725 aa19.83■□□□□ 0.77
RFFL-211ENST00000584541 UBE2OQ9C0C9 1292 aaKnown RBP19.83■□□□□ 0.77
RFFL-211ENST00000584541 TMEM117Q9H0C3 514 aa19.83■□□□□ 0.77
RFFL-211ENST00000584541 SLC38A7Q9NVC3 462 aa19.83■□□□□ 0.77
RFFL-211ENST00000584541 SMIM28A0A1B0GU29 152 aa19.82■□□□□ 0.76
RFFL-211ENST00000584541 PES1O00541 588 aaKnown RBP19.82■□□□□ 0.76
RFFL-211ENST00000584541 INPPL1O15357 1258 aa19.82■□□□□ 0.76
RFFL-211ENST00000584541 MEFVO15553 781 aaPredicted RBP19.82■□□□□ 0.76
RFFL-211ENST00000584541 N4BP1O75113 896 aaKnown RBP19.82■□□□□ 0.76
RFFL-211ENST00000584541 THP07101 528 aa19.82■□□□□ 0.76
RFFL-211ENST00000584541 NFICP08651 508 aa19.82■□□□□ 0.76
RFFL-211ENST00000584541 ATP1A3P13637 1013 aa19.82■□□□□ 0.76
RFFL-211ENST00000584541 GTF2H1P32780 548 aa19.82■□□□□ 0.76
RFFL-211ENST00000584541 WNT7BP56706 349 aa19.82■□□□□ 0.76
RFFL-211ENST00000584541 MCCD1P59942 119 aaPredicted RBP19.82■□□□□ 0.76
RFFL-211ENST00000584541 DLG4P78352 724 aa19.82■□□□□ 0.76
RFFL-211ENST00000584541 CLDN10P78369 228 aa19.82■□□□□ 0.76
RFFL-211ENST00000584541 GRIK3Q13003 919 aa19.82■□□□□ 0.76
RFFL-211ENST00000584541 DUOXA2Q1HG44 320 aa19.82■□□□□ 0.76
RFFL-211ENST00000584541 UVSSAQ2YD98 709 aa19.82■□□□□ 0.76
RFFL-211ENST00000584541 FILIP1LQ4L180 1135 aa19.82■□□□□ 0.76
RFFL-211ENST00000584541 NOMO2Q5JPE7 1267 aa19.82■□□□□ 0.76
RFFL-211ENST00000584541 GLRA4Q5JXX5 417 aa19.82■□□□□ 0.76
RFFL-211ENST00000584541 CLLU1OSQ5K130 101 aa19.82■□□□□ 0.76
RFFL-211ENST00000584541 CRIPAKQ8N1N5 446 aa19.82■□□□□ 0.76
RFFL-211ENST00000584541 BEST2Q8NFU1 509 aa19.82■□□□□ 0.76
RFFL-211ENST00000584541 PHOSPHO2Q8TCD6 241 aa19.82■□□□□ 0.76
RFFL-211ENST00000584541 PLEKHO2Q8TD55 490 aa19.82■□□□□ 0.76
RFFL-211ENST00000584541 SLC35C1Q96A29 364 aa19.82■□□□□ 0.76
RFFL-211ENST00000584541 POP1Q99575 1024 aaKnown RBP19.82■□□□□ 0.76
RFFL-211ENST00000584541 MRPL9Q9BYD2 267 aaKnown RBP19.82■□□□□ 0.76
RFFL-211ENST00000584541 INTS13Q9NVM9 706 aa19.82■□□□□ 0.76
RFFL-211ENST00000584541 TAB2Q9NYJ8 693 aa19.82■□□□□ 0.76
RFFL-211ENST00000584541 UBQLN1Q9UMX0 589 aaKnown RBP19.82■□□□□ 0.76
RFFL-211ENST00000584541 DGKIO75912 1065 aa19.81■□□□□ 0.76
RFFL-211ENST00000584541 AFPP02771 609 aaKnown RBP19.81■□□□□ 0.76
RFFL-211ENST00000584541 SCNN1GP51170 649 aa19.81■□□□□ 0.76
RFFL-211ENST00000584541 COPB1P53618 953 aaKnown RBP19.81■□□□□ 0.76
RFFL-211ENST00000584541 RNASELQ05823 741 aaKnown RBP19.81■□□□□ 0.76
RFFL-211ENST00000584541 KCNH2Q12809 1159 aa19.81■□□□□ 0.76
RFFL-211ENST00000584541 VWA3BQ502W6 1294 aa19.81■□□□□ 0.76
RFFL-211ENST00000584541 EFCAB13Q8IY85 973 aa19.81■□□□□ 0.76
RFFL-211ENST00000584541 RNPC3Q96LT9 517 aaKnown RBP19.81■□□□□ 0.76
RFFL-211ENST00000584541 ZBED2Q9BTP6 218 aa19.81■□□□□ 0.76
RFFL-211ENST00000584541 VPS16Q9H269 839 aa19.81■□□□□ 0.76
RFFL-211ENST00000584541 MMRN2Q9H8L6 949 aa19.81■□□□□ 0.76
RFFL-211ENST00000584541 RNF19AQ9NV58 838 aa19.81■□□□□ 0.76
RFFL-211ENST00000584541 CXXC1Q9P0U4 656 aaPredicted RBP19.81■□□□□ 0.76
RFFL-211ENST00000584541 R3HCC1Q9Y3T6 440 aaKnown RBP19.81■□□□□ 0.76
RFFL-211ENST00000584541 GOLGA6L3A6NEY3 463 aa19.8■□□□□ 0.76
RFFL-211ENST00000584541 LRRC10BA6NIK2 292 aa19.8■□□□□ 0.76
RFFL-211ENST00000584541 TBKBP1A7MCY6 615 aa19.8■□□□□ 0.76
RFFL-211ENST00000584541 PTGESO14684 152 aa19.8■□□□□ 0.76
RFFL-211ENST00000584541 PHACTR2O75167 634 aa19.8■□□□□ 0.76
RFFL-211ENST00000584541 POMCP01189 267 aa19.8■□□□□ 0.76
RFFL-211ENST00000584541 FANCCQ00597 558 aa19.8■□□□□ 0.76
RFFL-211ENST00000584541 PLCB2Q00722 1185 aa19.8■□□□□ 0.76
RFFL-211ENST00000584541 CETN1Q12798 172 aa19.8■□□□□ 0.76
RFFL-211ENST00000584541 BIRC3Q13489 604 aa19.8■□□□□ 0.76
RFFL-211ENST00000584541 LMBRD2Q68DH5 695 aaPredicted RBP19.8■□□□□ 0.76
RFFL-211ENST00000584541 FAM117BQ6P1L5 589 aa19.8■□□□□ 0.76
RFFL-211ENST00000584541 ZMAT2Q96NC0 199 aaKnown RBP19.8■□□□□ 0.76
RFFL-211ENST00000584541 FAM193BQ96PV7 902 aaPredicted RBP19.8■□□□□ 0.76
RFFL-211ENST00000584541 PPP1R10Q96QC0 940 aaKnown RBP19.8■□□□□ 0.76
RFFL-211ENST00000584541 GDF15Q99988 308 aa19.8■□□□□ 0.76
RFFL-211ENST00000584541 NDST4Q9H3R1 872 aa19.8■□□□□ 0.76
RFFL-211ENST00000584541 TMEM8AQ9HCN3 771 aa19.8■□□□□ 0.76
RFFL-211ENST00000584541 TPM3P06753 285 aa19.79■□□□□ 0.76
RFFL-211ENST00000584541 ATP2A2P16615 1042 aaKnown RBP19.79■□□□□ 0.76
RFFL-211ENST00000584541 CYP3A5P20815 502 aa19.79■□□□□ 0.76
RFFL-211ENST00000584541 GCLMP48507 274 aa19.79■□□□□ 0.76
RFFL-211ENST00000584541 FMO5P49326 533 aa19.79■□□□□ 0.76
RFFL-211ENST00000584541 MXI1P50539 228 aa19.79■□□□□ 0.76
RFFL-211ENST00000584541 PPP3CAQ08209 521 aa19.79■□□□□ 0.76
RFFL-211ENST00000584541 C1orf220Q5T0J3 134 aa19.79■□□□□ 0.76
RFFL-211ENST00000584541 FKBP15Q5T1M5 1219 aa19.79■□□□□ 0.76
RFFL-211ENST00000584541 KRT39Q6A163 491 aa19.79■□□□□ 0.76
RFFL-211ENST00000584541 LRRC43Q8N309 656 aa19.79■□□□□ 0.76
RFFL-211ENST00000584541 GSTCDQ8NEC7 633 aa19.79■□□□□ 0.76
RFFL-211ENST00000584541 CASD1Q96PB1 797 aa19.79■□□□□ 0.76
RFFL-211ENST00000584541 YME1L1Q96TA2 773 aa19.79■□□□□ 0.76
RFFL-211ENST00000584541 MTMR12Q9C0I1 747 aa19.79■□□□□ 0.76
RFFL-211ENST00000584541 CXCL16Q9H2A7 254 aa19.79■□□□□ 0.76
RFFL-211ENST00000584541 MIOSQ9NXC5 875 aa19.79■□□□□ 0.76
RFFL-211ENST00000584541 DPP3Q9NY33 737 aa19.79■□□□□ 0.76
RFFL-211ENST00000584541 PTPRJQ12913 1337 aa19.78■□□□□ 0.76
RFFL-211ENST00000584541 P4HA2O15460 535 aa19.78■□□□□ 0.76
RFFL-211ENST00000584541 GJB5O95377 273 aa19.78■□□□□ 0.76
RFFL-211ENST00000584541 GATMP50440 423 aa19.78■□□□□ 0.76
RFFL-211ENST00000584541 AFF1P51825 1210 aaKnown RBP19.78■□□□□ 0.76
RFFL-211ENST00000584541 UBASH3AP57075 661 aa19.78■□□□□ 0.76
RFFL-211ENST00000584541 MYL7Q01449 175 aa19.78■□□□□ 0.76
RFFL-211ENST00000584541 SHHQ15465 462 aa19.78■□□□□ 0.76
RFFL-211ENST00000584541 ZBTB6Q15916 424 aa19.78■□□□□ 0.76
RFFL-211ENST00000584541 MIIPQ5JXC2 388 aa19.78■□□□□ 0.76
RFFL-211ENST00000584541 C9orf50Q5SZB4 431 aa19.78■□□□□ 0.76
RFFL-211ENST00000584541 RASIP1Q5U651 963 aa19.78■□□□□ 0.76
Retrieved 100 of 20,778 RNA–protein pairs in 46.8 ms