RNA–Protein interactions for RNA: ENST00000584063.5

CDK5RAP3-231, Transcript of CDK5 regulatory subunit associated protein 3, humanhuman

TSL 1 (best)

Gene CDK5RAP3, Length 2,759 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP3-231ENST00000584063 RASA4O43374 803 aa12.4□□□□□ -0.42
CDK5RAP3-231ENST00000584063 SHBGP04278 402 aa12.4□□□□□ -0.42
CDK5RAP3-231ENST00000584063 ARP10275 920 aa12.4□□□□□ -0.42
CDK5RAP3-231ENST00000584063 EPB41P11171 864 aaKnown RBP12.4□□□□□ -0.42
CDK5RAP3-231ENST00000584063 XRCC5P13010 732 aaKnown RBP12.4□□□□□ -0.42
CDK5RAP3-231ENST00000584063 RPL17P18621 184 aaKnown RBP12.4□□□□□ -0.42
CDK5RAP3-231ENST00000584063 KBTBD12Q3ZCT8 623 aa12.4□□□□□ -0.42
CDK5RAP3-231ENST00000584063 EAPPQ56P03 285 aaPredicted RBP12.4□□□□□ -0.42
CDK5RAP3-231ENST00000584063 DCAF15Q66K64 600 aa12.4□□□□□ -0.42
CDK5RAP3-231ENST00000584063 CCSAPQ6IQ19 270 aaPredicted RBP12.4□□□□□ -0.42
CDK5RAP3-231ENST00000584063 ZNF746Q6NUN9 644 aaPredicted RBP12.4□□□□□ -0.42
CDK5RAP3-231ENST00000584063 RINT1Q6NUQ1 792 aa12.4□□□□□ -0.42
CDK5RAP3-231ENST00000584063 CPNE8Q86YQ8 564 aa12.4□□□□□ -0.42
CDK5RAP3-231ENST00000584063 MYCT1Q8N699 235 aa12.4□□□□□ -0.42
CDK5RAP3-231ENST00000584063 FAM84AQ96KN4 292 aa12.4□□□□□ -0.42
CDK5RAP3-231ENST00000584063 CCDC113Q9H0I3 377 aa12.4□□□□□ -0.42
CDK5RAP3-231ENST00000584063 ACP6Q9NPH0 428 aa12.4□□□□□ -0.42
CDK5RAP3-231ENST00000584063 LUC7LQ9NQ29 371 aaKnown RBP12.4□□□□□ -0.42
CDK5RAP3-231ENST00000584063 IGLV3-22A0A075B6J6 115 aa12.4□□□□□ -0.43
CDK5RAP3-231ENST00000584063 ADM5C9JUS6 153 aa12.4□□□□□ -0.43
CDK5RAP3-231ENST00000584063 RBAK-RBAKDNI3L0D1 243 aa12.4□□□□□ -0.43
CDK5RAP3-231ENST00000584063 DDX3XO00571 662 aaKnown RBP eCLIP12.4□□□□□ -0.431e-8■■■□□ 15.4
CDK5RAP3-231ENST00000584063 MTRF1O75570 445 aaKnown RBP12.4□□□□□ -0.43
CDK5RAP3-231ENST00000584063 AFPP02771 609 aaKnown RBP12.4□□□□□ -0.43
CDK5RAP3-231ENST00000584063 SREBF1P36956 1147 aa12.4□□□□□ -0.43
CDK5RAP3-231ENST00000584063 IFFO1Q0D2I5 559 aa12.4□□□□□ -0.43
CDK5RAP3-231ENST00000584063 RCN1Q15293 331 aa12.4□□□□□ -0.43
CDK5RAP3-231ENST00000584063 GPR162Q16538 588 aa12.4□□□□□ -0.43
CDK5RAP3-231ENST00000584063 EPM2AIP1Q7L775 607 aaPredicted RBP12.4□□□□□ -0.43
CDK5RAP3-231ENST00000584063 C3orf20Q8ND61 904 aa12.4□□□□□ -0.43
CDK5RAP3-231ENST00000584063 TPCN2Q8NHX9 752 aa12.4□□□□□ -0.43
CDK5RAP3-231ENST00000584063 SLC35C1Q96A29 364 aa12.4□□□□□ -0.43
CDK5RAP3-231ENST00000584063 CYFIP2Q96F07 1278 aa12.4□□□□□ -0.43
CDK5RAP3-231ENST00000584063 PAWRQ96IZ0 340 aaKnown RBP12.4□□□□□ -0.43
CDK5RAP3-231ENST00000584063 ERVK-5Q9HDB9 667 aa12.4□□□□□ -0.43
CDK5RAP3-231ENST00000584063 FEM1BQ9UK73 627 aa12.4□□□□□ -0.43
CDK5RAP3-231ENST00000584063 GREB1LQ9C091 1923 aaPredicted RBP12.39□□□□□ -0.43
CDK5RAP3-231ENST00000584063 SLITRK3O94933 977 aa12.39□□□□□ -0.43
CDK5RAP3-231ENST00000584063 USP8P40818 1118 aa12.39□□□□□ -0.43
CDK5RAP3-231ENST00000584063 GALCP54803 685 aa12.39□□□□□ -0.43
CDK5RAP3-231ENST00000584063 DEUP1Q05D60 604 aa12.39□□□□□ -0.43
CDK5RAP3-231ENST00000584063 GRIK3Q13003 919 aa12.39□□□□□ -0.43
CDK5RAP3-231ENST00000584063 EPHA7Q15375 998 aa12.39□□□□□ -0.43
CDK5RAP3-231ENST00000584063 CCDC38Q502W7 563 aa12.39□□□□□ -0.43
CDK5RAP3-231ENST00000584063 IRGCQ6NXR0 463 aa12.39□□□□□ -0.43
CDK5RAP3-231ENST00000584063 BTNL9Q6UXG8 535 aa12.39□□□□□ -0.43
CDK5RAP3-231ENST00000584063 NLRP7Q8WX94 980 aa12.39□□□□□ -0.43
CDK5RAP3-231ENST00000584063 USP6NLQ92738 828 aa12.39□□□□□ -0.43
CDK5RAP3-231ENST00000584063 GLT8D2Q9H1C3 349 aa12.39□□□□□ -0.43
CDK5RAP3-231ENST00000584063 MMADHCQ9H3L0 296 aaPredicted RBP12.39□□□□□ -0.43
CDK5RAP3-231ENST00000584063 TMBIM4Q9HC24 238 aa12.39□□□□□ -0.43
CDK5RAP3-231ENST00000584063 SNX24Q9Y343 169 aa12.39□□□□□ -0.43
CDK5RAP3-231ENST00000584063 FAM25EA8MYX2 175 aa12.39□□□□□ -0.43
CDK5RAP3-231ENST00000584063 BUB1BO60566 1050 aaPredicted RBP12.39□□□□□ -0.43
CDK5RAP3-231ENST00000584063 KRT13P13646 458 aa12.39□□□□□ -0.43
CDK5RAP3-231ENST00000584063 CBWD6Q4V339 395 aa12.39□□□□□ -0.43
CDK5RAP3-231ENST00000584063 GLE1Q53GS7 698 aaKnown RBP12.39□□□□□ -0.43
CDK5RAP3-231ENST00000584063 CBWD3Q5JTY5 395 aa12.39□□□□□ -0.43
CDK5RAP3-231ENST00000584063 CBWD5Q5RIA9 395 aa12.39□□□□□ -0.43
CDK5RAP3-231ENST00000584063 MOB2Q70IA6 237 aa12.39□□□□□ -0.43
CDK5RAP3-231ENST00000584063 CEP57Q86XR8 500 aa12.39□□□□□ -0.43
CDK5RAP3-231ENST00000584063 SLFN12Q8IYM2 578 aa12.39□□□□□ -0.43
CDK5RAP3-231ENST00000584063 SELENOSQ9BQE4 189 aa12.39□□□□□ -0.43
CDK5RAP3-231ENST00000584063 GOLGA6L7A0A1B0GV03 622 aa12.38□□□□□ -0.43
CDK5RAP3-231ENST00000584063 PGRMC1O00264 195 aaKnown RBP12.38□□□□□ -0.43
CDK5RAP3-231ENST00000584063 TBX3O15119 743 aa12.38□□□□□ -0.43
CDK5RAP3-231ENST00000584063 ATMINO43313 823 aaPredicted RBP12.38□□□□□ -0.43
CDK5RAP3-231ENST00000584063 TBCAO75347 108 aaKnown RBP12.38□□□□□ -0.43
CDK5RAP3-231ENST00000584063 MYCLP12524 364 aaPredicted RBP12.38□□□□□ -0.43
CDK5RAP3-231ENST00000584063 IFNAR2P48551 515 aa12.38□□□□□ -0.43
CDK5RAP3-231ENST00000584063 CDR1P51861 262 aa12.38□□□□□ -0.43
CDK5RAP3-231ENST00000584063 PLTPP55058 493 aa12.38□□□□□ -0.43
CDK5RAP3-231ENST00000584063 Q4G0T1 1027 aa12.38□□□□□ -0.43
CDK5RAP3-231ENST00000584063 B4GALNT4Q76KP1 1039 aa12.38□□□□□ -0.43
CDK5RAP3-231ENST00000584063 SULF1Q8IWU6 871 aa12.38□□□□□ -0.43
CDK5RAP3-231ENST00000584063 KIRREL3Q8IZU9 778 aa12.38□□□□□ -0.43
CDK5RAP3-231ENST00000584063 ARHGEF26Q96DR7 871 aa12.38□□□□□ -0.43
CDK5RAP3-231ENST00000584063 ATG4CQ96DT6 458 aa12.38□□□□□ -0.43
CDK5RAP3-231ENST00000584063 CCDC114Q96M63 670 aa12.38□□□□□ -0.43
CDK5RAP3-231ENST00000584063 SH3GL1Q99961 368 aa12.38□□□□□ -0.43
CDK5RAP3-231ENST00000584063 PCIF1Q9H4Z3 704 aa12.38□□□□□ -0.43
CDK5RAP3-231ENST00000584063 MLXIPLQ9NP71 852 aa12.38□□□□□ -0.43
CDK5RAP3-231ENST00000584063 DNAJC17Q9NVM6 304 aaKnown RBP12.38□□□□□ -0.43
CDK5RAP3-231ENST00000584063 AIPL1Q9NZN9 384 aa12.38□□□□□ -0.43
CDK5RAP3-231ENST00000584063 DDX20Q9UHI6 824 aaKnown RBP12.38□□□□□ -0.43
CDK5RAP3-231ENST00000584063 TSKSQ9UJT2 592 aa12.38□□□□□ -0.43
CDK5RAP3-231ENST00000584063 MRPL11Q9Y3B7 192 aaKnown RBP12.38□□□□□ -0.43
CDK5RAP3-231ENST00000584063 LTBP3Q9NS15 1303 aa12.38□□□□□ -0.43
CDK5RAP3-231ENST00000584063 DNM1LO00429 736 aa12.38□□□□□ -0.43
CDK5RAP3-231ENST00000584063 TNFRSF10BO14763 440 aa12.38□□□□□ -0.43
CDK5RAP3-231ENST00000584063 SORBS3O60504 671 aa12.38□□□□□ -0.43
CDK5RAP3-231ENST00000584063 HSPA1AP0DMV8 641 aaKnown RBP12.38□□□□□ -0.43
CDK5RAP3-231ENST00000584063 HSPA1BP0DMV9 641 aaKnown RBP12.38□□□□□ -0.43
CDK5RAP3-231ENST00000584063 PTPRAP18433 802 aa12.38□□□□□ -0.43
CDK5RAP3-231ENST00000584063 EIF2AK2P19525 551 aaKnown RBP12.38□□□□□ -0.43
CDK5RAP3-231ENST00000584063 MARSP56192 900 aaKnown RBP12.38□□□□□ -0.43
CDK5RAP3-231ENST00000584063 TMEM62Q0P6H9 643 aa12.38□□□□□ -0.43
CDK5RAP3-231ENST00000584063 AP3B2Q13367 1082 aa12.38□□□□□ -0.43
CDK5RAP3-231ENST00000584063 PHLDB2Q86SQ0 1253 aa12.38□□□□□ -0.43
CDK5RAP3-231ENST00000584063 ZC3H3Q8IXZ2 948 aaKnown RBP12.38□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 14 ms