RNA–Protein interactions for RNA: ENST00000583930.5

CCDC178-213, Transcript of coiled-coil domain containing 178, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CCDC178, Length 3,094 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC178-213ENST00000583930 RNPC3Q96LT9 517 aaKnown RBP3.35□□□□□ -1.87
CCDC178-213ENST00000583930 FAM126AQ9BYI3 521 aaPredicted RBP3.35□□□□□ -1.87
CCDC178-213ENST00000583930 MIR1-1HGQ9H1L0 117 aa3.35□□□□□ -1.87
CCDC178-213ENST00000583930 DISC1Q9NRI5 854 aa3.35□□□□□ -1.87
CCDC178-213ENST00000583930 ZNF215Q9UL58 517 aaPredicted RBP3.35□□□□□ -1.87
CCDC178-213ENST00000583930 TRAF3IP3Q9Y228 551 aa3.35□□□□□ -1.87
CCDC178-213ENST00000583930 GPC6Q9Y625 555 aaPredicted RBP3.35□□□□□ -1.87
CCDC178-213ENST00000583930 TRIP12Q14669 1992 aaPredicted RBP3.35□□□□□ -1.87
CCDC178-213ENST00000583930 CCDC194A0A1B0GVG4 234 aa3.35□□□□□ -1.87
CCDC178-213ENST00000583930 A0A1W2PQ45 241 aaPredicted RBP3.35□□□□□ -1.87
CCDC178-213ENST00000583930 A0A1W2PQY0 241 aa3.35□□□□□ -1.87
CCDC178-213ENST00000583930 DCDC2CA8MYV0 355 aa3.35□□□□□ -1.87
CCDC178-213ENST00000583930 GIPC1O14908 333 aa3.35□□□□□ -1.87
CCDC178-213ENST00000583930 PPFIA3O75145 1194 aa3.35□□□□□ -1.87
CCDC178-213ENST00000583930 ADH7P40394 386 aa3.35□□□□□ -1.87
CCDC178-213ENST00000583930 AARSP49588 968 aaKnown RBP eCLIP3.35□□□□□ -1.87
CCDC178-213ENST00000583930 EFNA5P52803 228 aa3.35□□□□□ -1.87
CCDC178-213ENST00000583930 NLRP5P59047 1200 aa3.35□□□□□ -1.87
CCDC178-213ENST00000583930 KRT85P78386 507 aa3.35□□□□□ -1.87
CCDC178-213ENST00000583930 RAB33AQ14088 237 aa3.35□□□□□ -1.87
CCDC178-213ENST00000583930 MXD4Q14582 209 aaPredicted RBP3.35□□□□□ -1.87
CCDC178-213ENST00000583930 CALCRLQ16602 461 aa3.35□□□□□ -1.87
CCDC178-213ENST00000583930 FSCN1Q16658 493 aaKnown RBP3.35□□□□□ -1.87
CCDC178-213ENST00000583930 TMEM266Q2M3C6 531 aa3.35□□□□□ -1.87
CCDC178-213ENST00000583930 EDRF1Q3B7T1 1238 aa3.35□□□□□ -1.87
CCDC178-213ENST00000583930 PRAMEF18Q5VWM3 479 aa3.35□□□□□ -1.87
CCDC178-213ENST00000583930 MRM1Q6IN84 353 aaKnown RBP3.35□□□□□ -1.87
CCDC178-213ENST00000583930 SLC39A5Q6ZMH5 540 aa3.35□□□□□ -1.87
CCDC178-213ENST00000583930 TSHZ1Q6ZSZ6 1077 aa3.35□□□□□ -1.87
CCDC178-213ENST00000583930 HEATR3Q7Z4Q2 680 aa3.35□□□□□ -1.87
CCDC178-213ENST00000583930 RNF180Q86T96 592 aa3.35□□□□□ -1.87
CCDC178-213ENST00000583930 TLK2Q86UE8 772 aa3.35□□□□□ -1.87
CCDC178-213ENST00000583930 C12orf40Q86WS4 652 aa3.35□□□□□ -1.87
CCDC178-213ENST00000583930 ZNF276Q8N554 614 aa3.35□□□□□ -1.87
CCDC178-213ENST00000583930 SMCR8Q8TEV9 937 aaPredicted RBP3.35□□□□□ -1.87
CCDC178-213ENST00000583930 PHKBQ93100 1093 aa3.35□□□□□ -1.87
CCDC178-213ENST00000583930 ZNF689Q96CS4 500 aaPredicted RBP3.35□□□□□ -1.87
CCDC178-213ENST00000583930 GSDMAQ96QA5 445 aa3.35□□□□□ -1.87
CCDC178-213ENST00000583930 DEPDC7Q96QD5 511 aa3.35□□□□□ -1.87
CCDC178-213ENST00000583930 FTHL17Q9BXU8 183 aa3.35□□□□□ -1.87
CCDC178-213ENST00000583930 BHLHE41Q9C0J9 482 aaPredicted RBP3.35□□□□□ -1.87
CCDC178-213ENST00000583930 MCOLN1Q9GZU1 580 aa3.35□□□□□ -1.87
CCDC178-213ENST00000583930 TRPV6Q9H1D0 765 aa3.35□□□□□ -1.87
CCDC178-213ENST00000583930 NCOA5Q9HCD5 579 aaKnown RBP3.35□□□□□ -1.87
CCDC178-213ENST00000583930 ERVK-5Q9HDB9 667 aa3.35□□□□□ -1.87
CCDC178-213ENST00000583930 UBN1Q9NPG3 1134 aa3.35□□□□□ -1.87
CCDC178-213ENST00000583930 DDX19AQ9NUU7 478 aaKnown RBP3.35□□□□□ -1.87
CCDC178-213ENST00000583930 VPS54Q9P1Q0 977 aa3.35□□□□□ -1.87
CCDC178-213ENST00000583930 CEP72Q9P209 647 aa3.35□□□□□ -1.87
CCDC178-213ENST00000583930 CPA4Q9UI42 421 aa3.35□□□□□ -1.87
CCDC178-213ENST00000583930 LZTS1Q9Y250 596 aa3.35□□□□□ -1.87
CCDC178-213ENST00000583930 PCDHB14Q9Y5E9 798 aa3.35□□□□□ -1.87
CCDC178-213ENST00000583930 NCANO14594 1321 aa3.35□□□□□ -1.87
CCDC178-213ENST00000583930 ESYT3A0FGR9 886 aa3.35□□□□□ -1.87
CCDC178-213ENST00000583930 PRAMEF27A3QJZ7 478 aa3.35□□□□□ -1.87
CCDC178-213ENST00000583930 BTBD18B2RXH4 712 aa3.35□□□□□ -1.87
CCDC178-213ENST00000583930 P4HA2O15460 535 aa3.35□□□□□ -1.87
CCDC178-213ENST00000583930 LINC00271P0C7V0 271 aa3.35□□□□□ -1.87
CCDC178-213ENST00000583930 RARBP10826 455 aa3.35□□□□□ -1.87
CCDC178-213ENST00000583930 ESRRAP11474 423 aaPredicted RBP3.35□□□□□ -1.87
CCDC178-213ENST00000583930 ALAS1P13196 640 aa3.35□□□□□ -1.87
CCDC178-213ENST00000583930 SOX18P35713 384 aa3.35□□□□□ -1.87
CCDC178-213ENST00000583930 SLC16A2P36021 539 aa3.35□□□□□ -1.87
CCDC178-213ENST00000583930 SOX9P48436 509 aa3.35□□□□□ -1.87
CCDC178-213ENST00000583930 ACLYP53396 1101 aa3.35□□□□□ -1.87
CCDC178-213ENST00000583930 CRYBB1P53674 252 aaPredicted RBP3.35□□□□□ -1.87
CCDC178-213ENST00000583930 GSTM4Q03013 218 aa3.35□□□□□ -1.87
CCDC178-213ENST00000583930 PPP2R3AQ06190 1150 aa3.35□□□□□ -1.87
CCDC178-213ENST00000583930 PPP2R5AQ15172 486 aa3.35□□□□□ -1.87
CCDC178-213ENST00000583930 PLEKHG4Q58EX7 1191 aa3.35□□□□□ -1.87
CCDC178-213ENST00000583930 BRDTQ58F21 947 aaPredicted RBP3.35□□□□□ -1.87
CCDC178-213ENST00000583930 RRP12Q5JTH9 1297 aaKnown RBP3.35□□□□□ -1.87
CCDC178-213ENST00000583930 ELMSAN1Q6PJG2 1045 aa3.35□□□□□ -1.87
CCDC178-213ENST00000583930 SHC4Q6S5L8 630 aa3.35□□□□□ -1.87
CCDC178-213ENST00000583930 CYP26C1Q6V0L0 522 aa3.35□□□□□ -1.87
CCDC178-213ENST00000583930 PLA2G4DQ86XP0 818 aa3.35□□□□□ -1.87
CCDC178-213ENST00000583930 MAP4K3Q8IVH8 894 aa3.35□□□□□ -1.87
CCDC178-213ENST00000583930 SCML4Q8N228 414 aa3.35□□□□□ -1.87
CCDC178-213ENST00000583930 ANKRD35Q8N283 1001 aa3.35□□□□□ -1.87
CCDC178-213ENST00000583930 TMEM102Q8N9M5 508 aaPredicted RBP3.35□□□□□ -1.87
CCDC178-213ENST00000583930 GOLGA5Q8TBA6 731 aa3.35□□□□□ -1.87
CCDC178-213ENST00000583930 SH3TC2Q8TF17 1288 aa3.35□□□□□ -1.87
CCDC178-213ENST00000583930 GATAD2BQ8WXI9 593 aa3.35□□□□□ -1.87
CCDC178-213ENST00000583930 BSNDQ8WZ55 320 aa3.35□□□□□ -1.87
CCDC178-213ENST00000583930 PMEPA1Q969W9 287 aa3.35□□□□□ -1.87
CCDC178-213ENST00000583930 BORCS6Q96GS4 357 aa3.35□□□□□ -1.87
CCDC178-213ENST00000583930 UBA5Q9GZZ9 404 aa3.35□□□□□ -1.87
CCDC178-213ENST00000583930 LMAN2LQ9H0V9 348 aa3.35□□□□□ -1.87
CCDC178-213ENST00000583930 C11orf49Q9H6J7 331 aa3.35□□□□□ -1.87
CCDC178-213ENST00000583930 PLEKHA5Q9HAU0 1116 aa3.35□□□□□ -1.87
CCDC178-213ENST00000583930 AVENQ9NQS1 362 aaPredicted RBP3.35□□□□□ -1.87
CCDC178-213ENST00000583930 LMBRD1Q9NUN5 540 aa3.35□□□□□ -1.87
CCDC178-213ENST00000583930 FANCLQ9NW38 375 aa3.35□□□□□ -1.87
CCDC178-213ENST00000583930 ATXN7L1Q9ULK2 861 aaPredicted RBP3.35□□□□□ -1.87
CCDC178-213ENST00000583930 SLC6A14Q9UN76 642 aa3.35□□□□□ -1.87
CCDC178-213ENST00000583930 CNPY2Q9Y2B0 182 aa3.35□□□□□ -1.87
CCDC178-213ENST00000583930 CXorf51AA0A1B0GTR3 108 aa3.34□□□□□ -1.87
CCDC178-213ENST00000583930 GTPBP10A4D1E9 387 aaKnown RBP3.34□□□□□ -1.87
CCDC178-213ENST00000583930 LRRC10BA6NIK2 292 aa3.34□□□□□ -1.87
CCDC178-213ENST00000583930 FSCN2O14926 492 aa3.34□□□□□ -1.87
Retrieved 100 of 20,778 RNA–protein pairs in 50.7 ms