RNA–Protein interactions for RNA: ENST00000583800.1

SMCHD1-210, Transcript of structural maintenance of chromosomes flexible hinge domain containing 1, humanhuman

TSL 5

Gene SMCHD1, Length 865 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMCHD1-210ENST00000583800 TCP11Q8WWU5 503 aa8.67□□□□□ -1.02
SMCHD1-210ENST00000583800 SMG7Q92540 1137 aaKnown RBP8.67□□□□□ -1.02
SMCHD1-210ENST00000583800 HAS1Q92839 578 aa8.67□□□□□ -1.02
SMCHD1-210ENST00000583800 ZNF707Q96C28 371 aaPredicted RBP8.67□□□□□ -1.02
SMCHD1-210ENST00000583800 FAM20AQ96MK3 541 aa8.67□□□□□ -1.02
SMCHD1-210ENST00000583800 ZFP42Q96MM3 310 aa8.67□□□□□ -1.02
SMCHD1-210ENST00000583800 MYADMQ96S97 322 aa8.67□□□□□ -1.02
SMCHD1-210ENST00000583800 RTP3Q9BQQ7 232 aa8.67□□□□□ -1.02
SMCHD1-210ENST00000583800 PHF20Q9BVI0 1012 aa8.67□□□□□ -1.02
SMCHD1-210ENST00000583800 NXF3Q9H4D5 531 aaKnown RBP8.67□□□□□ -1.02
SMCHD1-210ENST00000583800 WDR6Q9NNW5 1121 aaKnown RBP8.67□□□□□ -1.02
SMCHD1-210ENST00000583800 XPNPEP1Q9NQW7 623 aa8.67□□□□□ -1.02
SMCHD1-210ENST00000583800 GJB4Q9NTQ9 266 aa8.67□□□□□ -1.02
SMCHD1-210ENST00000583800 RGL1Q9NZL6 768 aa8.67□□□□□ -1.02
SMCHD1-210ENST00000583800 CACNA1IQ9P0X4 2223 aa8.67□□□□□ -1.02
SMCHD1-210ENST00000583800 CA14Q9ULX7 337 aa8.67□□□□□ -1.02
SMCHD1-210ENST00000583800 PPME1Q9Y570 386 aa8.67□□□□□ -1.02
SMCHD1-210ENST00000583800 INO80B-WBP1J3KQ70 363 aa8.66□□□□□ -1.02
SMCHD1-210ENST00000583800 GAS2O43903 313 aaKnown RBP8.66□□□□□ -1.02
SMCHD1-210ENST00000583800 LZTS3O60299 673 aaPredicted RBP8.66□□□□□ -1.02
SMCHD1-210ENST00000583800 REC8O95072 547 aa8.66□□□□□ -1.02
SMCHD1-210ENST00000583800 GCFC2P16383 781 aaKnown RBP8.66□□□□□ -1.02
SMCHD1-210ENST00000583800 RPL17P18621 184 aaKnown RBP8.66□□□□□ -1.02
SMCHD1-210ENST00000583800 SCNN1AP37088 669 aa8.66□□□□□ -1.02
SMCHD1-210ENST00000583800 DSG1Q02413 1049 aa8.66□□□□□ -1.02
SMCHD1-210ENST00000583800 SPIRE1Q08AE8 756 aa8.66□□□□□ -1.02
SMCHD1-210ENST00000583800 SCRN1Q12765 414 aa8.66□□□□□ -1.02
SMCHD1-210ENST00000583800 CAPSQ13938 189 aa8.66□□□□□ -1.02
SMCHD1-210ENST00000583800 EARS2Q5JPH6 523 aaKnown RBP8.66□□□□□ -1.02
SMCHD1-210ENST00000583800 PPP4R3AQ6IN85 833 aa8.66□□□□□ -1.02
SMCHD1-210ENST00000583800 FUT10Q6P4F1 479 aa8.66□□□□□ -1.02
SMCHD1-210ENST00000583800 NOTUMQ6P988 496 aa8.66□□□□□ -1.02
SMCHD1-210ENST00000583800 CPLX2Q6PUV4 134 aaKnown RBP8.66□□□□□ -1.02
SMCHD1-210ENST00000583800 GET4Q7L5D6 327 aaPredicted RBP8.66□□□□□ -1.02
SMCHD1-210ENST00000583800 CDR2LQ86X02 465 aaPredicted RBP8.66□□□□□ -1.02
SMCHD1-210ENST00000583800 PALB2Q86YC2 1186 aa8.66□□□□□ -1.02
SMCHD1-210ENST00000583800 EXOC8Q8IYI6 725 aa8.66□□□□□ -1.02
SMCHD1-210ENST00000583800 GPR152Q8TDT2 470 aa8.66□□□□□ -1.02
SMCHD1-210ENST00000583800 ASAP3Q8TDY4 903 aa8.66□□□□□ -1.02
SMCHD1-210ENST00000583800 RIN2Q8WYP3 895 aaPredicted RBP8.66□□□□□ -1.02
SMCHD1-210ENST00000583800 RABGGTAQ92696 567 aa8.66□□□□□ -1.02
SMCHD1-210ENST00000583800 STAMQ92783 540 aa8.66□□□□□ -1.02
SMCHD1-210ENST00000583800 IRF7Q92985 503 aa8.66□□□□□ -1.02
SMCHD1-210ENST00000583800 ZNF274Q96GC6 653 aaPredicted RBP8.66□□□□□ -1.02
SMCHD1-210ENST00000583800 SPATA32Q96LK8 384 aa8.66□□□□□ -1.02
SMCHD1-210ENST00000583800 GPR62Q9BZJ7 368 aa8.66□□□□□ -1.02
SMCHD1-210ENST00000583800 CSRNP2Q9H175 543 aa8.66□□□□□ -1.02
SMCHD1-210ENST00000583800 TBC1D17Q9HA65 648 aa8.66□□□□□ -1.02
SMCHD1-210ENST00000583800 RXFP1Q9HBX9 757 aa8.66□□□□□ -1.02
SMCHD1-210ENST00000583800 UBN1Q9NPG3 1134 aa8.66□□□□□ -1.02
SMCHD1-210ENST00000583800 EPS15L1Q9UBC2 864 aa8.66□□□□□ -1.02
SMCHD1-210ENST00000583800 CACNG4Q9UBN1 327 aa8.66□□□□□ -1.02
SMCHD1-210ENST00000583800 WNT16Q9UBV4 365 aa8.66□□□□□ -1.02
SMCHD1-210ENST00000583800 EGFL7Q9UHF1 273 aa8.66□□□□□ -1.02
SMCHD1-210ENST00000583800 SSX2IPQ9Y2D8 614 aa8.66□□□□□ -1.02
SMCHD1-210ENST00000583800 CYP46A1Q9Y6A2 500 aa8.66□□□□□ -1.02
SMCHD1-210ENST00000583800 EP300Q09472 2414 aaPredicted RBP8.66□□□□□ -1.02
SMCHD1-210ENST00000583800 NOTCH4Q99466 2003 aa8.66□□□□□ -1.02
SMCHD1-210ENST00000583800 TBX3O15119 743 aa8.65□□□□□ -1.02
SMCHD1-210ENST00000583800 ASAP2O43150 1006 aa8.65□□□□□ -1.02
SMCHD1-210ENST00000583800 B4GALT5O43286 388 aa8.65□□□□□ -1.02
SMCHD1-210ENST00000583800 TGM5O43548 720 aa8.65□□□□□ -1.02
SMCHD1-210ENST00000583800 MARCH6O60337 910 aa8.65□□□□□ -1.02
SMCHD1-210ENST00000583800 RECKO95980 971 aa8.65□□□□□ -1.02
SMCHD1-210ENST00000583800 SRFP11831 508 aa8.65□□□□□ -1.02
SMCHD1-210ENST00000583800 ARF4P18085 180 aaPredicted RBP8.65□□□□□ -1.02
SMCHD1-210ENST00000583800 AKAP5P24588 427 aa8.65□□□□□ -1.02
SMCHD1-210ENST00000583800 AXLP30530 894 aa8.65□□□□□ -1.02
SMCHD1-210ENST00000583800 ID4P47928 161 aa8.65□□□□□ -1.02
SMCHD1-210ENST00000583800 PTENP60484 403 aa8.65□□□□□ -1.02
SMCHD1-210ENST00000583800 FOXK2Q01167 660 aa8.65□□□□□ -1.02
SMCHD1-210ENST00000583800 MBTD1Q05BQ5 628 aa8.65□□□□□ -1.02
SMCHD1-210ENST00000583800 NCOA4Q13772 614 aa8.65□□□□□ -1.02
SMCHD1-210ENST00000583800 SPECC1Q5M775 1068 aa8.65□□□□□ -1.02
SMCHD1-210ENST00000583800 ELMSAN1Q6PJG2 1045 aa8.65□□□□□ -1.02
SMCHD1-210ENST00000583800 LYPD8Q6UX82 237 aa8.65□□□□□ -1.02
SMCHD1-210ENST00000583800 OTUD6AQ7L8S5 288 aa8.65□□□□□ -1.02
SMCHD1-210ENST00000583800 TPH2Q8IWU9 490 aa8.65□□□□□ -1.02
SMCHD1-210ENST00000583800 NPAS3Q8IXF0 933 aa8.65□□□□□ -1.02
SMCHD1-210ENST00000583800 SLC44A3Q8N4M1 653 aa8.65□□□□□ -1.02
SMCHD1-210ENST00000583800 GSTCDQ8NEC7 633 aa8.65□□□□□ -1.02
SMCHD1-210ENST00000583800 CCDC51Q96ER9 411 aa8.65□□□□□ -1.02
SMCHD1-210ENST00000583800 USB1Q9BQ65 265 aaKnown RBP8.65□□□□□ -1.02
SMCHD1-210ENST00000583800 RHOBTB2Q9BYZ6 727 aa8.65□□□□□ -1.02
SMCHD1-210ENST00000583800 TRIM6Q9C030 488 aaPredicted RBP8.65□□□□□ -1.02
SMCHD1-210ENST00000583800 NT5C3AQ9H0P0 336 aa8.65□□□□□ -1.02
SMCHD1-210ENST00000583800 ZSWIM4Q9H7M6 989 aa8.65□□□□□ -1.02
SMCHD1-210ENST00000583800 PIDD1Q9HB75 910 aa8.65□□□□□ -1.02
SMCHD1-210ENST00000583800 CHST7Q9NS84 486 aa8.65□□□□□ -1.02
SMCHD1-210ENST00000583800 KLK14Q9P0G3 267 aa8.65□□□□□ -1.02
SMCHD1-210ENST00000583800 DPP7Q9UHL4 492 aa8.65□□□□□ -1.02
SMCHD1-210ENST00000583800 GIT1Q9Y2X7 761 aa8.65□□□□□ -1.02
SMCHD1-210ENST00000583800 R4GN57 208 aa8.65□□□□□ -1.02
SMCHD1-210ENST00000583800 STK36Q9NRP7 1315 aa8.64□□□□□ -1.03
SMCHD1-210ENST00000583800 SLITRK3O94933 977 aa8.64□□□□□ -1.03
SMCHD1-210ENST00000583800 NPTXRO95502 500 aa8.64□□□□□ -1.03
SMCHD1-210ENST00000583800 DCNP07585 359 aaKnown RBP8.64□□□□□ -1.03
SMCHD1-210ENST00000583800 GLRA2P23416 452 aa8.64□□□□□ -1.03
SMCHD1-210ENST00000583800 SKOR1P84550 965 aa8.64□□□□□ -1.03
SMCHD1-210ENST00000583800 TAGLNQ01995 201 aaKnown RBP8.64□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 15.1 ms