RNA–Protein interactions for RNA: ENST00000583475.1

VAPA-206, Transcript of VAMP associated protein A, humanhuman

TSL 2

Gene VAPA, Length 939 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAPA-206ENST00000583475 SAP30BPQ9UHR5 308 aaKnown RBP4.82□□□□□ -1.64
VAPA-206ENST00000583475 SERPINB13Q9UIV8 391 aa4.82□□□□□ -1.64
VAPA-206ENST00000583475 COL4A3Q01955 1670 aa4.82□□□□□ -1.64
VAPA-206ENST00000583475 GAGE12BA1L429 117 aa4.81□□□□□ -1.64
VAPA-206ENST00000583475 GAGE12HA6NDE8 117 aa4.81□□□□□ -1.64
VAPA-206ENST00000583475 CCDC154A6NI56 674 aa4.81□□□□□ -1.64
VAPA-206ENST00000583475 TMEM200CA6NKL6 621 aa4.81□□□□□ -1.64
VAPA-206ENST00000583475 RNASET2O00584 256 aaKnown RBP4.81□□□□□ -1.64
VAPA-206ENST00000583475 TEX33O43247 280 aa4.81□□□□□ -1.64
VAPA-206ENST00000583475 NCR1O76036 304 aa4.81□□□□□ -1.64
VAPA-206ENST00000583475 ZRANB2O95218 330 aaKnown RBP eCLIP4.81□□□□□ -1.642e-6■□□□□ 9.6
VAPA-206ENST00000583475 ADH4P08319 380 aa4.81□□□□□ -1.64
VAPA-206ENST00000583475 LAG3P18627 525 aa4.81□□□□□ -1.64
VAPA-206ENST00000583475 SLC6A2P23975 617 aa4.81□□□□□ -1.64
VAPA-206ENST00000583475 CCND1P24385 295 aa4.81□□□□□ -1.64
VAPA-206ENST00000583475 CTXN1P60606 82 aa4.81□□□□□ -1.64
VAPA-206ENST00000583475 KIF23Q02241 960 aaPredicted RBP4.81□□□□□ -1.64
VAPA-206ENST00000583475 C3orf36Q3SXR2 165 aa4.81□□□□□ -1.64
VAPA-206ENST00000583475 ZNF529Q6P280 563 aa4.81□□□□□ -1.64
VAPA-206ENST00000583475 UBE3BQ7Z3V4 1068 aa4.81□□□□□ -1.64
VAPA-206ENST00000583475 DRC7Q8IY82 874 aa4.81□□□□□ -1.64
VAPA-206ENST00000583475 RAB24Q969Q5 203 aa4.81□□□□□ -1.64
VAPA-206ENST00000583475 HDAC10Q969S8 669 aa4.81□□□□□ -1.64
VAPA-206ENST00000583475 DMRTA2Q96SC8 542 aa4.81□□□□□ -1.64
VAPA-206ENST00000583475 SMAD5Q99717 465 aaKnown RBP4.81□□□□□ -1.64
VAPA-206ENST00000583475 MLST8Q9BVC4 326 aa4.81□□□□□ -1.64
VAPA-206ENST00000583475 MRIQ9BWK5 157 aa4.81□□□□□ -1.64
VAPA-206ENST00000583475 FBXO34Q9NWN3 711 aa4.81□□□□□ -1.64
VAPA-206ENST00000583475 RUVBL1Q9Y265 456 aaKnown RBP4.81□□□□□ -1.64
VAPA-206ENST00000583475 USP15Q9Y4E8 981 aaPredicted RBP4.81□□□□□ -1.64
VAPA-206ENST00000583475 PCDHB1Q9Y5F3 818 aa4.81□□□□□ -1.64
VAPA-206ENST00000583475 CENPVL1A0A0U1RR11 272 aa4.8□□□□□ -1.64
VAPA-206ENST00000583475 TCRBV7S2A1N4TA0A589 114 aa4.8□□□□□ -1.64
VAPA-206ENST00000583475 LPXNO60711 386 aa4.8□□□□□ -1.64
VAPA-206ENST00000583475 NDUFA10O95299 355 aa4.8□□□□□ -1.64
VAPA-206ENST00000583475 BMPR1AP36894 532 aa4.8□□□□□ -1.64
VAPA-206ENST00000583475 ADKP55263 362 aaKnown RBP4.8□□□□□ -1.64
VAPA-206ENST00000583475 CDC42EP1Q00587 391 aa4.8□□□□□ -1.64
VAPA-206ENST00000583475 EXOSC10Q01780 885 aaKnown RBP4.8□□□□□ -1.64
VAPA-206ENST00000583475 BEAN1Q3B7T3 259 aa4.8□□□□□ -1.64
VAPA-206ENST00000583475 TIGD2Q4W5G0 525 aa4.8□□□□□ -1.64
VAPA-206ENST00000583475 DACT2Q5SW24 774 aa4.8□□□□□ -1.64
VAPA-206ENST00000583475 TSHZ3Q63HK5 1081 aa4.8□□□□□ -1.64
VAPA-206ENST00000583475 LRRC55Q6ZSA7 311 aa4.8□□□□□ -1.64
VAPA-206ENST00000583475 MIGA2Q7L4E1 593 aa4.8□□□□□ -1.64
VAPA-206ENST00000583475 PLXDC1Q8IUK5 500 aa4.8□□□□□ -1.64
VAPA-206ENST00000583475 RHOT2Q8IXI1 618 aa4.8□□□□□ -1.64
VAPA-206ENST00000583475 SYNE4Q8N205 404 aa4.8□□□□□ -1.64
VAPA-206ENST00000583475 DCBLD1Q8N8Z6 715 aa4.8□□□□□ -1.64
VAPA-206ENST00000583475 IFI44Q8TCB0 444 aa4.8□□□□□ -1.64
VAPA-206ENST00000583475 MRGPRX4Q96LA9 322 aa4.8□□□□□ -1.64
VAPA-206ENST00000583475 GSTO2Q9H4Y5 243 aa4.8□□□□□ -1.64
VAPA-206ENST00000583475 TDP1Q9NUW8 608 aa4.8□□□□□ -1.64
VAPA-206ENST00000583475 KLHL11Q9NVR0 708 aa4.8□□□□□ -1.64
VAPA-206ENST00000583475 CCDC78A2IDD5 438 aa4.79□□□□□ -1.64
VAPA-206ENST00000583475 SGTAO43765 313 aa4.79□□□□□ -1.64
VAPA-206ENST00000583475 ABHD16AO95870 558 aa4.79□□□□□ -1.64
VAPA-206ENST00000583475 ELANEP08246 267 aa4.79□□□□□ -1.64
VAPA-206ENST00000583475 RECQLP46063 649 aaPredicted RBP4.79□□□□□ -1.64
VAPA-206ENST00000583475 HMGA2P52926 109 aa4.79□□□□□ -1.64
VAPA-206ENST00000583475 DSC2Q02487 901 aa4.79□□□□□ -1.64
VAPA-206ENST00000583475 DPTQ07507 201 aa4.79□□□□□ -1.64
VAPA-206ENST00000583475 LDLRAD3Q86YD5 345 aa4.79□□□□□ -1.64
VAPA-206ENST00000583475 OR56A1Q8NGH5 318 aa4.79□□□□□ -1.64
VAPA-206ENST00000583475 PROKR1Q8TCW9 393 aa4.79□□□□□ -1.64
VAPA-206ENST00000583475 STAG1Q8WVM7 1258 aa4.79□□□□□ -1.64
VAPA-206ENST00000583475 KAT5Q92993 513 aa4.79□□□□□ -1.64
VAPA-206ENST00000583475 ADAM2Q99965 735 aa4.79□□□□□ -1.64
VAPA-206ENST00000583475 NIPSNAP3AQ9UFN0 247 aaPredicted RBP4.79□□□□□ -1.64
VAPA-206ENST00000583475 ATP11BQ9Y2G3 1177 aa4.79□□□□□ -1.64
VAPA-206ENST00000583475 MAP3K2Q9Y2U5 619 aa4.79□□□□□ -1.64
VAPA-206ENST00000583475 FPGT-TNNI3KV9GXZ4 949 aa4.79□□□□□ -1.64
VAPA-206ENST00000583475 hCG_2014768A0A024R1R8 64 aa4.78□□□□□ -1.64
VAPA-206ENST00000583475 MARCH11A6NNE9 402 aa4.78□□□□□ -1.64
VAPA-206ENST00000583475 PPFIA4O75335 1185 aa4.78□□□□□ -1.64
VAPA-206ENST00000583475 CFIP05156 583 aa4.78□□□□□ -1.64
VAPA-206ENST00000583475 SBK3P0C264 359 aa4.78□□□□□ -1.64
VAPA-206ENST00000583475 SPATA31D3P0C874 917 aa4.78□□□□□ -1.64
VAPA-206ENST00000583475 GCSHP23434 173 aa4.78□□□□□ -1.64
VAPA-206ENST00000583475 SLC6A4P31645 630 aa4.78□□□□□ -1.64
VAPA-206ENST00000583475 ZNF280AP59817 542 aaPredicted RBP4.78□□□□□ -1.64
VAPA-206ENST00000583475 TGFB2P61812 414 aa4.78□□□□□ -1.64
VAPA-206ENST00000583475 PTPAQ15257 358 aa4.78□□□□□ -1.64
VAPA-206ENST00000583475 UAP1L1Q3KQV9 507 aa4.78□□□□□ -1.64
VAPA-206ENST00000583475 LY6G5CQ5SRR4 150 aa4.78□□□□□ -1.64
VAPA-206ENST00000583475 SPATA31D4Q6ZUB0 917 aa4.78□□□□□ -1.64
VAPA-206ENST00000583475 RSPH3Q86UC2 560 aa4.78□□□□□ -1.64
VAPA-206ENST00000583475 VRK3Q8IV63 474 aa4.78□□□□□ -1.64
VAPA-206ENST00000583475 MAPKAPK5Q8IW41 473 aa4.78□□□□□ -1.64
VAPA-206ENST00000583475 ARHGEF19Q8IW93 802 aa4.78□□□□□ -1.64
VAPA-206ENST00000583475 CMTR2Q8IYT2 770 aaKnown RBP4.78□□□□□ -1.64
VAPA-206ENST00000583475 TMEM132CQ8N3T6 1108 aa4.78□□□□□ -1.64
VAPA-206ENST00000583475 CPEB3Q8NE35 698 aaKnown RBP4.78□□□□□ -1.64
VAPA-206ENST00000583475 CHMP4CQ96CF2 233 aa4.78□□□□□ -1.64
VAPA-206ENST00000583475 TMX3Q96JJ7 454 aa4.78□□□□□ -1.64
VAPA-206ENST00000583475 C11orf54Q9H0W9 315 aaPredicted RBP4.78□□□□□ -1.64
VAPA-206ENST00000583475 KAT6AQ92794 2004 aa4.77□□□□□ -1.65
VAPA-206ENST00000583475 A0A1B0GTW7 788 aa4.77□□□□□ -1.65
VAPA-206ENST00000583475 KIAA0391O15091 583 aaKnown RBP4.77□□□□□ -1.65
VAPA-206ENST00000583475 FOXN1O15353 648 aa4.77□□□□□ -1.65
Retrieved 100 of 20,778 RNA–protein pairs in 25.4 ms