RNA–Protein interactions for RNA: ENST00000581708.5

CDK5RAP3-222, Transcript of CDK5 regulatory subunit associated protein 3, human

TSL 4

Gene CDK5RAP3, Length 543 nt, Biotype processed transcript.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CDK5RAP3-222	ENST00000581708	LINC00301	Q8NCQ3	95 aa		13.75	□□□□□ -0.21
CDK5RAP3-222	ENST00000581708	LNX1	Q8TBB1	728 aa	Predicted RBP	13.75	□□□□□ -0.21
CDK5RAP3-222	ENST00000581708	BICD1	Q96G01	975 aa		13.75	□□□□□ -0.21
CDK5RAP3-222	ENST00000581708	PAAF1	Q9BRP4	392 aa		13.75	□□□□□ -0.21
CDK5RAP3-222	ENST00000581708	LRRC27	Q9C0I9	530 aa		13.75	□□□□□ -0.21
CDK5RAP3-222	ENST00000581708	CUEDC2	Q9H467	287 aa		13.75	□□□□□ -0.21
CDK5RAP3-222	ENST00000581708	POMK	Q9H5K3	350 aa		13.75	□□□□□ -0.21
CDK5RAP3-222	ENST00000581708	C11orf16	Q9NQ32	467 aa		13.75	□□□□□ -0.21
CDK5RAP3-222	ENST00000581708	MAN1C1	Q9NR34	630 aa		13.75	□□□□□ -0.21
CDK5RAP3-222	ENST00000581708	ANKFY1	Q9P2R3	1169 aa		13.75	□□□□□ -0.21
CDK5RAP3-222	ENST00000581708	TRIP11	Q15643	1979 aa		13.74	□□□□□ -0.21
CDK5RAP3-222	ENST00000581708		A0A0B4J269	797 aa		13.74	□□□□□ -0.21
CDK5RAP3-222	ENST00000581708	SPTLC2	O15270	562 aa		13.74	□□□□□ -0.21
CDK5RAP3-222	ENST00000581708	OGT	O15294	1046 aa		13.74	□□□□□ -0.21
CDK5RAP3-222	ENST00000581708	XPOT	O43592	962 aa	Known RBP	13.74	□□□□□ -0.21
CDK5RAP3-222	ENST00000581708	ADRB2	P07550	413 aa		13.74	□□□□□ -0.21
CDK5RAP3-222	ENST00000581708	CYP3A5	P20815	502 aa		13.74	□□□□□ -0.21
CDK5RAP3-222	ENST00000581708	CLCNKB	P51801	687 aa		13.74	□□□□□ -0.21
CDK5RAP3-222	ENST00000581708	CACNB1	Q02641	598 aa	Predicted RBP	13.74	□□□□□ -0.21
CDK5RAP3-222	ENST00000581708	CEBPZ	Q03701	1054 aa	Known RBP	13.74	□□□□□ -0.21
CDK5RAP3-222	ENST00000581708	ALCAM	Q13740	583 aa		13.74	□□□□□ -0.21
CDK5RAP3-222	ENST00000581708	PSMD5	Q16401	504 aa		13.74	□□□□□ -0.21
CDK5RAP3-222	ENST00000581708	SLC10A6	Q3KNW5	377 aa		13.74	□□□□□ -0.21
CDK5RAP3-222	ENST00000581708	RTP2	Q5QGT7	225 aa		13.74	□□□□□ -0.21
CDK5RAP3-222	ENST00000581708	ANKS3	Q6ZW76	656 aa		13.74	□□□□□ -0.21
CDK5RAP3-222	ENST00000581708	USP49	Q70CQ1	688 aa		13.74	□□□□□ -0.21
CDK5RAP3-222	ENST00000581708	OTOP3	Q7RTS5	596 aa		13.74	□□□□□ -0.21
CDK5RAP3-222	ENST00000581708	STAM	Q92783	540 aa		13.74	□□□□□ -0.21
CDK5RAP3-222	ENST00000581708	ACSF2	Q96CM8	615 aa	Predicted RBP	13.74	□□□□□ -0.21
CDK5RAP3-222	ENST00000581708	ZBTB45	Q96K62	511 aa	Predicted RBP	13.74	□□□□□ -0.21
CDK5RAP3-222	ENST00000581708	FIZ1	Q96SL8	496 aa		13.74	□□□□□ -0.21
CDK5RAP3-222	ENST00000581708	APOL5	Q9BWW9	433 aa		13.74	□□□□□ -0.21
CDK5RAP3-222	ENST00000581708	OLFML3	Q9NRN5	406 aa		13.74	□□□□□ -0.21
CDK5RAP3-222	ENST00000581708	FOXD4L1	Q9NU39	408 aa		13.74	□□□□□ -0.21
CDK5RAP3-222	ENST00000581708	MUTYH	Q9UIF7	546 aa		13.74	□□□□□ -0.21
CDK5RAP3-222	ENST00000581708	BACE2	Q9Y5Z0	518 aa		13.74	□□□□□ -0.21
CDK5RAP3-222	ENST00000581708	MTCL1	Q9Y4B5	1905 aa	Known RBP	13.74	□□□□□ -0.21
CDK5RAP3-222	ENST00000581708	TTC26	A0AVF1	554 aa		13.73	□□□□□ -0.21
CDK5RAP3-222	ENST00000581708	SYN3	O14994	580 aa		13.73	□□□□□ -0.21
CDK5RAP3-222	ENST00000581708	TGM5	O43548	720 aa		13.73	□□□□□ -0.21
CDK5RAP3-222	ENST00000581708	POU2F2	P09086	479 aa		13.73	□□□□□ -0.21
CDK5RAP3-222	ENST00000581708	HNRNPA1	P09651	372 aa	Known RBP eCLIP	13.73	□□□□□ -0.21	8e-6	■□□□□ 10.1
CDK5RAP3-222	ENST00000581708	ZSCAN22	P10073	491 aa	Predicted RBP	13.73	□□□□□ -0.21
CDK5RAP3-222	ENST00000581708	COL9A1	P20849	921 aa		13.73	□□□□□ -0.21
CDK5RAP3-222	ENST00000581708	HOXA9	P31269	272 aa		13.73	□□□□□ -0.21
CDK5RAP3-222	ENST00000581708	STAT6	P42226	847 aa		13.73	□□□□□ -0.21
CDK5RAP3-222	ENST00000581708	MATR3	P43243	847 aa	Known RBP eCLIP	13.73	□□□□□ -0.21
CDK5RAP3-222	ENST00000581708	OSTN	P61366	133 aa		13.73	□□□□□ -0.21
CDK5RAP3-222	ENST00000581708	PTPN21	Q16825	1174 aa		13.73	□□□□□ -0.21
CDK5RAP3-222	ENST00000581708	UVSSA	Q2YD98	709 aa		13.73	□□□□□ -0.21
CDK5RAP3-222	ENST00000581708	GLRA4	Q5JXX5	417 aa		13.73	□□□□□ -0.21
CDK5RAP3-222	ENST00000581708	SPECC1	Q5M775	1068 aa		13.73	□□□□□ -0.21
CDK5RAP3-222	ENST00000581708	TMC5	Q6UXY8	1006 aa		13.73	□□□□□ -0.21
CDK5RAP3-222	ENST00000581708	CCDC149	Q6ZUS6	474 aa		13.73	□□□□□ -0.21
CDK5RAP3-222	ENST00000581708	ZNF720	Q7Z2F6	126 aa		13.73	□□□□□ -0.21
CDK5RAP3-222	ENST00000581708	BMP8A	Q7Z5Y6	402 aa		13.73	□□□□□ -0.21
CDK5RAP3-222	ENST00000581708	UBALD2	Q8IYN6	164 aa		13.73	□□□□□ -0.21
CDK5RAP3-222	ENST00000581708	C12orf76	Q8N812	135 aa	Predicted RBP	13.73	□□□□□ -0.21
CDK5RAP3-222	ENST00000581708	TDRD5	Q8NAT2	981 aa	Known RBP	13.73	□□□□□ -0.21
CDK5RAP3-222	ENST00000581708	KCNG4	Q8TDN1	519 aa		13.73	□□□□□ -0.21
CDK5RAP3-222	ENST00000581708	RABGGTA	Q92696	567 aa		13.73	□□□□□ -0.21
CDK5RAP3-222	ENST00000581708	DDX12P	Q92771	950 aa		13.73	□□□□□ -0.21
CDK5RAP3-222	ENST00000581708	ZMAT2	Q96NC0	199 aa	Known RBP	13.73	□□□□□ -0.21
CDK5RAP3-222	ENST00000581708	CLIC6	Q96NY7	704 aa		13.73	□□□□□ -0.21
CDK5RAP3-222	ENST00000581708	CLSTN3	Q9BQT9	956 aa		13.73	□□□□□ -0.21
CDK5RAP3-222	ENST00000581708	CXCL16	Q9H2A7	254 aa		13.73	□□□□□ -0.21
CDK5RAP3-222	ENST00000581708	ZHX3	Q9H4I2	956 aa		13.73	□□□□□ -0.21
CDK5RAP3-222	ENST00000581708	MTRR	Q9UBK8	725 aa		13.73	□□□□□ -0.21
CDK5RAP3-222	ENST00000581708	CFAP45	Q9UL16	551 aa		13.73	□□□□□ -0.21
CDK5RAP3-222	ENST00000581708	STYXL1	Q9Y6J8	313 aa		13.73	□□□□□ -0.21
CDK5RAP3-222	ENST00000581708	MYH15	Q9Y2K3	1946 aa		13.72	□□□□□ -0.21
CDK5RAP3-222	ENST00000581708	DENND4A	Q7Z401	1863 aa		13.72	□□□□□ -0.21
CDK5RAP3-222	ENST00000581708	CCDC195	A0A1B0GUA6	201 aa		13.72	□□□□□ -0.21
CDK5RAP3-222	ENST00000581708	PODXL	O00592	558 aa		13.72	□□□□□ -0.21
CDK5RAP3-222	ENST00000581708	CUTA	O60888	179 aa		13.72	□□□□□ -0.21
CDK5RAP3-222	ENST00000581708	ZMYND10	O75800	440 aa		13.72	□□□□□ -0.21
CDK5RAP3-222	ENST00000581708	ZXDA	P98168	799 aa		13.72	□□□□□ -0.21
CDK5RAP3-222	ENST00000581708	AMPD3	Q01432	767 aa		13.72	□□□□□ -0.21
CDK5RAP3-222	ENST00000581708	PPP2R3A	Q06190	1150 aa		13.72	□□□□□ -0.21
CDK5RAP3-222	ENST00000581708	SOX4	Q06945	474 aa	Predicted RBP	13.72	□□□□□ -0.21
CDK5RAP3-222	ENST00000581708	RAB33A	Q14088	237 aa		13.72	□□□□□ -0.21
CDK5RAP3-222	ENST00000581708	POSTN	Q15063	836 aa		13.72	□□□□□ -0.21
CDK5RAP3-222	ENST00000581708	ZBTB6	Q15916	424 aa		13.72	□□□□□ -0.21
CDK5RAP3-222	ENST00000581708	TRIM67	Q6ZTA4	783 aa		13.72	□□□□□ -0.21
CDK5RAP3-222	ENST00000581708	CEP57	Q86XR8	500 aa		13.72	□□□□□ -0.21
CDK5RAP3-222	ENST00000581708	KREMEN2	Q8NCW0	462 aa		13.72	□□□□□ -0.21
CDK5RAP3-222	ENST00000581708	HASPIN	Q8TF76	798 aa		13.72	□□□□□ -0.21
CDK5RAP3-222	ENST00000581708	DNAJC19	Q96DA6	116 aa		13.72	□□□□□ -0.21
CDK5RAP3-222	ENST00000581708	B3GALT6	Q96L58	329 aa		13.72	□□□□□ -0.21
CDK5RAP3-222	ENST00000581708	STRA6	Q9BX79	667 aa		13.72	□□□□□ -0.21
CDK5RAP3-222	ENST00000581708	OXCT2	Q9BYC2	517 aa	Predicted RBP	13.72	□□□□□ -0.21
CDK5RAP3-222	ENST00000581708	PRKD2	Q9BZL6	878 aa		13.72	□□□□□ -0.21
CDK5RAP3-222	ENST00000581708	KCNH6	Q9H252	994 aa		13.72	□□□□□ -0.21
CDK5RAP3-222	ENST00000581708	TNMD	Q9H2S6	317 aa		13.72	□□□□□ -0.21
CDK5RAP3-222	ENST00000581708	MAGEF1	Q9HAY2	307 aa		13.72	□□□□□ -0.21
CDK5RAP3-222	ENST00000581708	WDR6	Q9NNW5	1121 aa	Known RBP	13.72	□□□□□ -0.21
CDK5RAP3-222	ENST00000581708	CACNG4	Q9UBN1	327 aa		13.72	□□□□□ -0.21
CDK5RAP3-222	ENST00000581708	MAFF	Q9ULX9	164 aa		13.72	□□□□□ -0.21
CDK5RAP3-222	ENST00000581708	UBQLN1	Q9UMX0	589 aa	Known RBP	13.72	□□□□□ -0.21
CDK5RAP3-222	ENST00000581708	EXOC7	Q9UPT5	735 aa		13.72	□□□□□ -0.21

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