RNA–Protein interactions for RNA: ENST00000581660.5

CSNK1D-219, Transcript of casein kinase 1 delta, humanhuman

TSL 5

Gene CSNK1D, Length 611 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1D-219ENST00000581660 ARF4P18085 180 aaPredicted RBP15.39■□□□□ 0.05
CSNK1D-219ENST00000581660 FGFR3P22607 806 aa15.39■□□□□ 0.05
CSNK1D-219ENST00000581660 CYP3A7P24462 503 aa15.39■□□□□ 0.05
CSNK1D-219ENST00000581660 CCNE1P24864 410 aa15.39■□□□□ 0.05
CSNK1D-219ENST00000581660 QARSP47897 775 aaKnown RBP15.39■□□□□ 0.05
CSNK1D-219ENST00000581660 MBTD1Q05BQ5 628 aa15.39■□□□□ 0.05
CSNK1D-219ENST00000581660 POU5F1BQ06416 359 aa15.39■□□□□ 0.05
CSNK1D-219ENST00000581660 EMC2Q15006 297 aa15.39■□□□□ 0.05
CSNK1D-219ENST00000581660 CCDC6Q16204 474 aa15.39■□□□□ 0.05
CSNK1D-219ENST00000581660 WDR44Q5JSH3 913 aa15.39■□□□□ 0.05
CSNK1D-219ENST00000581660 DGKKQ5KSL6 1271 aa15.39■□□□□ 0.05
CSNK1D-219ENST00000581660 CREB3L3Q68CJ9 461 aa15.39■□□□□ 0.05
CSNK1D-219ENST00000581660 Q6ZS52 159 aa15.39■□□□□ 0.05
CSNK1D-219ENST00000581660 CACNA2D4Q7Z3S7 1137 aa15.39■□□□□ 0.05
CSNK1D-219ENST00000581660 ETNPPLQ8TBG4 499 aa15.39■□□□□ 0.05
CSNK1D-219ENST00000581660 GAB3Q8WWW8 586 aa15.39■□□□□ 0.05
CSNK1D-219ENST00000581660 SMARCD2Q92925 531 aa15.39■□□□□ 0.05
CSNK1D-219ENST00000581660 CEP170P1Q96L14 293 aa15.39■□□□□ 0.05
CSNK1D-219ENST00000581660 TRPV4Q9HBA0 871 aa15.39■□□□□ 0.05
CSNK1D-219ENST00000581660 C2orf42Q9NWW7 574 aa15.39■□□□□ 0.05
CSNK1D-219ENST00000581660 BACE2Q9Y5Z0 518 aa15.39■□□□□ 0.05
CSNK1D-219ENST00000581660 CCDC163A0A0D9SF12 145 aa15.38■□□□□ 0.05
CSNK1D-219ENST00000581660 WDR27A2RRH5 827 aa15.38■□□□□ 0.05
CSNK1D-219ENST00000581660 CASTOR2A6NHX0 329 aa15.38■□□□□ 0.05
CSNK1D-219ENST00000581660 TAF4O00268 1085 aa15.38■□□□□ 0.05
CSNK1D-219ENST00000581660 DKC1O60832 514 aaKnown RBP eCLIP15.38■□□□□ 0.05
CSNK1D-219ENST00000581660 NOVA1P51513 510 aaKnown RBP15.38■□□□□ 0.05
CSNK1D-219ENST00000581660 EXOSC10Q01780 885 aaKnown RBP15.38■□□□□ 0.05
CSNK1D-219ENST00000581660 NECTIN1Q15223 517 aa15.38■□□□□ 0.05
CSNK1D-219ENST00000581660 NAB2Q15742 525 aa15.38■□□□□ 0.05
CSNK1D-219ENST00000581660 RNF43Q68DV7 783 aa15.38■□□□□ 0.05
CSNK1D-219ENST00000581660 SLC27A1Q6PCB7 646 aa15.38■□□□□ 0.05
CSNK1D-219ENST00000581660 TCEAL4Q96EI5 215 aa15.38■□□□□ 0.05
CSNK1D-219ENST00000581660 VPS45Q9NRW7 570 aa15.38■□□□□ 0.05
CSNK1D-219ENST00000581660 RBM12Q9NTZ6 932 aaKnown RBP15.38■□□□□ 0.05
CSNK1D-219ENST00000581660 KLK14Q9P0G3 267 aa15.38■□□□□ 0.05
CSNK1D-219ENST00000581660 CDY1Q9Y6F8 540 aa15.38■□□□□ 0.05
CSNK1D-219ENST00000581660 MAST4O15021 2626 aa15.37■□□□□ 0.05
CSNK1D-219ENST00000581660 A0A1B0GUA9 196 aa15.37■□□□□ 0.05
CSNK1D-219ENST00000581660 INO80B-WBP1J3KQ70 363 aa15.37■□□□□ 0.05
CSNK1D-219ENST00000581660 ZNF197O14709 1029 aa15.37■□□□□ 0.05
CSNK1D-219ENST00000581660 ZNF263O14978 683 aa15.37■□□□□ 0.05
CSNK1D-219ENST00000581660 AKAP3O75969 853 aa15.37■□□□□ 0.05
CSNK1D-219ENST00000581660 ZNF252P-AS1Q0IIN9 211 aa15.37■□□□□ 0.05
CSNK1D-219ENST00000581660 FOXC1Q12948 553 aa15.37■□□□□ 0.05
CSNK1D-219ENST00000581660 MXD4Q14582 209 aaPredicted RBP15.37■□□□□ 0.05
CSNK1D-219ENST00000581660 MFSD6LQ8IWD5 586 aa15.37■□□□□ 0.05
CSNK1D-219ENST00000581660 CCDC148Q8NFR7 591 aa15.37■□□□□ 0.05
CSNK1D-219ENST00000581660 NFKBIZQ9BYH8 718 aa15.37■□□□□ 0.05
CSNK1D-219ENST00000581660 WRAP73Q9P2S5 460 aaPredicted RBP15.37■□□□□ 0.05
CSNK1D-219ENST00000581660 LOC400499M0QZD8 3231 aa15.37■□□□□ 0.05
CSNK1D-219ENST00000581660 PDCD11Q14690 1871 aaKnown RBP15.36■□□□□ 0.05
CSNK1D-219ENST00000581660 FREM2Q5SZK8 3169 aa15.36■□□□□ 0.05
CSNK1D-219ENST00000581660 TMEM189-UBE2V1I3L0A0 370 aa15.36■□□□□ 0.05
CSNK1D-219ENST00000581660 EML1O00423 815 aa15.36■□□□□ 0.05
CSNK1D-219ENST00000581660 PTGESO14684 152 aa15.36■□□□□ 0.05
CSNK1D-219ENST00000581660 GIPC1O14908 333 aa15.36■□□□□ 0.05
CSNK1D-219ENST00000581660 PRPF3O43395 683 aaKnown RBP15.36■□□□□ 0.05
CSNK1D-219ENST00000581660 RPP40O75818 363 aaKnown RBP15.36■□□□□ 0.05
CSNK1D-219ENST00000581660 NPTXRO95502 500 aa15.36■□□□□ 0.05
CSNK1D-219ENST00000581660 TDP2O95551 362 aa15.36■□□□□ 0.05
CSNK1D-219ENST00000581660 ADD1P35611 737 aaKnown RBP15.36■□□□□ 0.05
CSNK1D-219ENST00000581660 MPLP40238 635 aa15.36■□□□□ 0.05
CSNK1D-219ENST00000581660 CCR2P41597 374 aa15.36■□□□□ 0.05
CSNK1D-219ENST00000581660 PPP2R5CQ13362 524 aa15.36■□□□□ 0.05
CSNK1D-219ENST00000581660 TFDP1Q14186 410 aa15.36■□□□□ 0.05
CSNK1D-219ENST00000581660 MOXD1Q6UVY6 613 aa15.36■□□□□ 0.05
CSNK1D-219ENST00000581660 KBTBD6Q86V97 674 aa15.36■□□□□ 0.05
CSNK1D-219ENST00000581660 SYNPOQ8N3V7 929 aa15.36■□□□□ 0.05
CSNK1D-219ENST00000581660 ZCCHC14Q8WYQ9 949 aaKnown RBP15.36■□□□□ 0.05
CSNK1D-219ENST00000581660 ZC3H10Q96K80 434 aaKnown RBP15.36■□□□□ 0.05
CSNK1D-219ENST00000581660 ZSWIM3Q96MP5 696 aa15.36■□□□□ 0.05
CSNK1D-219ENST00000581660 CORO1BQ9BR76 489 aa15.36■□□□□ 0.05
CSNK1D-219ENST00000581660 C8orf33Q9H7E9 229 aaPredicted RBP15.36■□□□□ 0.05
CSNK1D-219ENST00000581660 PARP2Q9UGN5 583 aa15.36■□□□□ 0.05
CSNK1D-219ENST00000581660 VAV3Q9UKW4 847 aa15.36■□□□□ 0.05
CSNK1D-219ENST00000581660 NCANO14594 1321 aa15.36■□□□□ 0.05
CSNK1D-219ENST00000581660 ARID2Q68CP9 1835 aa15.36■□□□□ 0.05
CSNK1D-219ENST00000581660 KLF18A0A0U1RQI7 1052 aa15.35■□□□□ 0.05
CSNK1D-219ENST00000581660 CCDC196A0A1B0GTZ2 297 aa15.35■□□□□ 0.05
CSNK1D-219ENST00000581660 B4GALT5O43286 388 aa15.35■□□□□ 0.05
CSNK1D-219ENST00000581660 ABLIM3O94929 683 aa15.35■□□□□ 0.05
CSNK1D-219ENST00000581660 LRG1P02750 347 aa15.35■□□□□ 0.05
CSNK1D-219ENST00000581660 P4HBP07237 508 aaKnown RBP15.35■□□□□ 0.05
CSNK1D-219ENST00000581660 SPINK2P20155 84 aa15.35■□□□□ 0.05
CSNK1D-219ENST00000581660 HOXC13P31276 330 aa15.35■□□□□ 0.05
CSNK1D-219ENST00000581660 VIPR2P41587 438 aa15.35■□□□□ 0.05
CSNK1D-219ENST00000581660 CCINQ13939 588 aa15.35■□□□□ 0.05
CSNK1D-219ENST00000581660 SLC8B1Q6J4K2 584 aa15.35■□□□□ 0.05
CSNK1D-219ENST00000581660 PDZD4Q76G19 769 aaPredicted RBP15.35■□□□□ 0.05
CSNK1D-219ENST00000581660 C4orf19Q8IY42 314 aa15.35■□□□□ 0.05
CSNK1D-219ENST00000581660 ZNF461Q8TAF7 563 aa15.35■□□□□ 0.05
CSNK1D-219ENST00000581660 TBCKQ8TEA7 893 aa15.35■□□□□ 0.05
CSNK1D-219ENST00000581660 E2F7Q96AV8 911 aa15.35■□□□□ 0.05
CSNK1D-219ENST00000581660 MTRQ99707 1265 aa15.35■□□□□ 0.05
CSNK1D-219ENST00000581660 C22orf23Q9BZE7 217 aa15.35■□□□□ 0.05
CSNK1D-219ENST00000581660 SMOC1Q9H4F8 434 aa15.35■□□□□ 0.05
CSNK1D-219ENST00000581660 XPNPEP1Q9NQW7 623 aa15.35■□□□□ 0.05
CSNK1D-219ENST00000581660 BMP2KQ9NSY1 1161 aaPredicted RBP15.35■□□□□ 0.05
CSNK1D-219ENST00000581660 NID2Q14112 1375 aa15.35■□□□□ 0.05
Retrieved 100 of 20,778 RNA–protein pairs in 17.3 ms