RNA–Protein interactions for RNA: ENST00000578789.1

MKS1-207, Transcript of Meckel syndrome, type 1, humanhuman

TSL 4

Gene MKS1, Length 568 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MKS1-207ENST00000578789 NDUFV1P49821 464 aa15.76■□□□□ 0.11
MKS1-207ENST00000578789 NDUFA8P51970 172 aa15.76■□□□□ 0.11
MKS1-207ENST00000578789 POU5F1Q01860 360 aaKnown RBP15.76■□□□□ 0.11
MKS1-207ENST00000578789 DSG1Q02413 1049 aa15.76■□□□□ 0.11
MKS1-207ENST00000578789 SOX4Q06945 474 aaPredicted RBP15.76■□□□□ 0.11
MKS1-207ENST00000578789 CUL4BQ13620 913 aa15.76■□□□□ 0.11
MKS1-207ENST00000578789 PUS10Q3MIT2 529 aaKnown RBP15.76■□□□□ 0.11
MKS1-207ENST00000578789 FAM26FQ5R3K3 315 aa15.76■□□□□ 0.11
MKS1-207ENST00000578789 ZBTB41Q5SVQ8 909 aa15.76■□□□□ 0.11
MKS1-207ENST00000578789 STXBP4Q6ZWJ1 553 aa15.76■□□□□ 0.11
MKS1-207ENST00000578789 EPM2AIP1Q7L775 607 aaPredicted RBP15.76■□□□□ 0.11
MKS1-207ENST00000578789 TAS1R1Q7RTX1 841 aa15.76■□□□□ 0.11
MKS1-207ENST00000578789 FSIP1Q8NA03 581 aa15.76■□□□□ 0.11
MKS1-207ENST00000578789 AUTS2Q8WXX7 1259 aa15.76■□□□□ 0.11
MKS1-207ENST00000578789 RABGGTAQ92696 567 aa15.76■□□□□ 0.11
MKS1-207ENST00000578789 PAGE5Q96GU1 130 aa15.76■□□□□ 0.11
MKS1-207ENST00000578789 MSLNLQ96KJ4 702 aa15.76■□□□□ 0.11
MKS1-207ENST00000578789 GPR62Q9BZJ7 368 aa15.76■□□□□ 0.11
MKS1-207ENST00000578789 BLZF1Q9H2G9 400 aa15.76■□□□□ 0.11
MKS1-207ENST00000578789 IKZF4Q9H2S9 585 aa15.76■□□□□ 0.11
MKS1-207ENST00000578789 TMEM206Q9H813 350 aa15.76■□□□□ 0.11
MKS1-207ENST00000578789 CHST7Q9NS84 486 aa15.76■□□□□ 0.11
MKS1-207ENST00000578789 CLEC1BQ9P126 229 aa15.76■□□□□ 0.11
MKS1-207ENST00000578789 SSX2IPQ9Y2D8 614 aa15.76■□□□□ 0.11
MKS1-207ENST00000578789 GTF3C5Q9Y5Q8 519 aaPredicted RBP15.76■□□□□ 0.11
MKS1-207ENST00000578789 UBE4BO95155 1302 aa15.75■□□□□ 0.11
MKS1-207ENST00000578789 MYL1P05976 194 aa15.75■□□□□ 0.11
MKS1-207ENST00000578789 SRGAP2BP0DMP2 458 aa15.75■□□□□ 0.11
MKS1-207ENST00000578789 ADSSP30520 456 aa15.75■□□□□ 0.11
MKS1-207ENST00000578789 AFMP43652 599 aa15.75■□□□□ 0.11
MKS1-207ENST00000578789 CLCNKBP51801 687 aa15.75■□□□□ 0.11
MKS1-207ENST00000578789 PPP2R3AQ06190 1150 aa15.75■□□□□ 0.11
MKS1-207ENST00000578789 ELAVL2Q12926 359 aaKnown RBP15.75■□□□□ 0.11
MKS1-207ENST00000578789 POSTNQ15063 836 aa15.75■□□□□ 0.11
MKS1-207ENST00000578789 ENOX2Q16206 610 aaKnown RBP15.75■□□□□ 0.11
MKS1-207ENST00000578789 UPP1Q16831 310 aa15.75■□□□□ 0.11
MKS1-207ENST00000578789 KIAA0319Q5VV43 1072 aa15.75■□□□□ 0.11
MKS1-207ENST00000578789 CD300LGQ6UXG3 332 aa15.75■□□□□ 0.11
MKS1-207ENST00000578789 EP400NLQ6ZTU2 488 aa15.75■□□□□ 0.11
MKS1-207ENST00000578789 CD302Q8IX05 232 aa15.75■□□□□ 0.11
MKS1-207ENST00000578789 GRAMD1CQ8IYS0 662 aa15.75■□□□□ 0.11
MKS1-207ENST00000578789 GLIS3Q8NEA6 775 aa15.75■□□□□ 0.11
MKS1-207ENST00000578789 HPS3Q969F9 1004 aa15.75■□□□□ 0.11
MKS1-207ENST00000578789 DDX27Q96GQ7 796 aaKnown RBP15.75■□□□□ 0.11
MKS1-207ENST00000578789 TSPAN18Q96SJ8 248 aa15.75■□□□□ 0.11
MKS1-207ENST00000578789 GOLPH3LQ9H4A5 285 aa15.75■□□□□ 0.11
MKS1-207ENST00000578789 RPF1Q9H9Y2 349 aaKnown RBP15.75■□□□□ 0.11
MKS1-207ENST00000578789 GOLGA2P5Q9HBQ8 144 aa15.75■□□□□ 0.11
MKS1-207ENST00000578789 MRPL17Q9NRX2 175 aaKnown RBP15.75■□□□□ 0.11
MKS1-207ENST00000578789 BARX2Q9UMQ3 279 aaPredicted RBP15.75■□□□□ 0.11
MKS1-207ENST00000578789 HCFC2Q9Y5Z7 792 aa15.75■□□□□ 0.11
MKS1-207ENST00000578789 TCF20Q9UGU0 1960 aaKnown RBP15.75■□□□□ 0.11
MKS1-207ENST00000578789 KLRC4O43908 158 aa15.74■□□□□ 0.11
MKS1-207ENST00000578789 TADA2AO75478 443 aa15.74■□□□□ 0.11
MKS1-207ENST00000578789 PRPF6O94906 941 aaKnown RBP15.74■□□□□ 0.11
MKS1-207ENST00000578789 GARTP22102 1010 aa15.74■□□□□ 0.11
MKS1-207ENST00000578789 CA8P35219 290 aa15.74■□□□□ 0.11
MKS1-207ENST00000578789 RBM10P98175 930 aaKnown RBP15.74■□□□□ 0.11
MKS1-207ENST00000578789 SMAD4Q13485 552 aaKnown RBP15.74■□□□□ 0.11
MKS1-207ENST00000578789 USP41Q3LFD5 358 aa15.74■□□□□ 0.11
MKS1-207ENST00000578789 DCLRE1AQ6PJP8 1040 aa15.74■□□□□ 0.11
MKS1-207ENST00000578789 HASPINQ8TF76 798 aa15.74■□□□□ 0.11
MKS1-207ENST00000578789 POMGNT1Q8WZA1 660 aa15.74■□□□□ 0.11
MKS1-207ENST00000578789 CASP10Q92851 521 aa15.74■□□□□ 0.11
MKS1-207ENST00000578789 C18orf25Q96B23 403 aaPredicted RBP15.74■□□□□ 0.11
MKS1-207ENST00000578789 COL25A1Q9BXS0 654 aaPredicted RBP15.74■□□□□ 0.11
MKS1-207ENST00000578789 EMILIN2Q9BXX0 1053 aa15.74■□□□□ 0.11
MKS1-207ENST00000578789 RXFP1Q9HBX9 757 aa15.74■□□□□ 0.11
MKS1-207ENST00000578789 CD207Q9UJ71 328 aa15.74■□□□□ 0.11
MKS1-207ENST00000578789 AGO2Q9UKV8 859 aaKnown RBP15.74■□□□□ 0.11
MKS1-207ENST00000578789 PLXNA3P51805 1871 aa15.74■□□□□ 0.11
MKS1-207ENST00000578789 GRXCR2A6NFK2 248 aa15.73■□□□□ 0.11
MKS1-207ENST00000578789 LACTBL1A8MY62 500 aa15.73■□□□□ 0.11
MKS1-207ENST00000578789 PODXLO00592 558 aa15.73■□□□□ 0.11
MKS1-207ENST00000578789 CNPP09543 421 aaKnown RBP15.73■□□□□ 0.11
MKS1-207ENST00000578789 CYP3A5P20815 502 aa15.73■□□□□ 0.11
MKS1-207ENST00000578789 LRPAP1P30533 357 aa15.73■□□□□ 0.11
MKS1-207ENST00000578789 RPL9P32969 192 aaKnown RBP15.73■□□□□ 0.11
MKS1-207ENST00000578789 ANP32AP39687 249 aaKnown RBP15.73■□□□□ 0.11
MKS1-207ENST00000578789 ZBTB6Q15916 424 aa15.73■□□□□ 0.11
MKS1-207ENST00000578789 BMT2Q1RMZ1 405 aa15.73■□□□□ 0.11
MKS1-207ENST00000578789 PTCRAQ6ISU1 281 aaPredicted RBP15.73■□□□□ 0.11
MKS1-207ENST00000578789 ANKRD54Q6NXT1 300 aa15.73■□□□□ 0.11
MKS1-207ENST00000578789 CRELD2Q6UXH1 353 aaPredicted RBP15.73■□□□□ 0.11
MKS1-207ENST00000578789 PPFIBP1Q86W92 1011 aa15.73■□□□□ 0.11
MKS1-207ENST00000578789 SYCP3Q8IZU3 236 aa15.73■□□□□ 0.11
MKS1-207ENST00000578789 SMRP1Q8NCR6 262 aa15.73■□□□□ 0.11
MKS1-207ENST00000578789 C3orf58Q8NDZ4 430 aa15.73■□□□□ 0.11
MKS1-207ENST00000578789 ZNF507Q8TCN5 953 aa15.73■□□□□ 0.11
MKS1-207ENST00000578789 ADAMTS19Q8TE59 1207 aa15.73■□□□□ 0.11
MKS1-207ENST00000578789 SLC22A17Q8WUG5 538 aa15.73■□□□□ 0.11
MKS1-207ENST00000578789 KIF12Q96FN5 646 aa15.73■□□□□ 0.11
MKS1-207ENST00000578789 KLHL5Q96PQ7 755 aa15.73■□□□□ 0.11
MKS1-207ENST00000578789 TUBGCP4Q9UGJ1 667 aa15.73■□□□□ 0.11
MKS1-207ENST00000578789 UBQLN1Q9UMX0 589 aaKnown RBP15.73■□□□□ 0.11
MKS1-207ENST00000578789 MBTPS2O43462 519 aa15.72■□□□□ 0.11
MKS1-207ENST00000578789 B3GAT3O94766 335 aa15.72■□□□□ 0.11
MKS1-207ENST00000578789 IL9P15248 144 aa15.72■□□□□ 0.11
MKS1-207ENST00000578789 IGFBP6P24592 240 aaPredicted RBP15.72■□□□□ 0.11
MKS1-207ENST00000578789 HOXD13P35453 343 aa15.72■□□□□ 0.11
Retrieved 100 of 20,778 RNA–protein pairs in 19.1 ms