RNA–Protein interactions for RNA: ENST00000578252.1

TRAPPC8-204, Transcript of trafficking protein particle complex 8, humanhuman

TSL 3

Gene TRAPPC8, Length 587 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC8-204ENST00000578252 ARMCX3Q9UH62 379 aaPredicted RBP12.16□□□□□ -0.46
TRAPPC8-204ENST00000578252 GIT1Q9Y2X7 761 aa12.16□□□□□ -0.46
TRAPPC8-204ENST00000578252 GTF3C5Q9Y5Q8 519 aaPredicted RBP12.16□□□□□ -0.46
TRAPPC8-204ENST00000578252 TTC3P53804 2025 aa12.15□□□□□ -0.46
TRAPPC8-204ENST00000578252 ANK1P16157 1881 aa12.15□□□□□ -0.46
TRAPPC8-204ENST00000578252 PDCD11Q14690 1871 aaKnown RBP12.15□□□□□ -0.46
TRAPPC8-204ENST00000578252 GOLGA8IPA6NC78 632 aa12.15□□□□□ -0.46
TRAPPC8-204ENST00000578252 GOLGA8JA6NMD2 632 aa12.15□□□□□ -0.46
TRAPPC8-204ENST00000578252 GPR37O15354 613 aa12.15□□□□□ -0.46
TRAPPC8-204ENST00000578252 STX10O60499 249 aa12.15□□□□□ -0.46
TRAPPC8-204ENST00000578252 RECQL4O94761 1208 aa12.15□□□□□ -0.46
TRAPPC8-204ENST00000578252 ADRB2P07550 413 aa12.15□□□□□ -0.46
TRAPPC8-204ENST00000578252 CASP4P49662 377 aa12.15□□□□□ -0.46
TRAPPC8-204ENST00000578252 CYP24A1Q07973 514 aa12.15□□□□□ -0.46
TRAPPC8-204ENST00000578252 NCAPHQ15003 741 aa12.15□□□□□ -0.46
TRAPPC8-204ENST00000578252 PSMD6Q15008 389 aa12.15□□□□□ -0.46
TRAPPC8-204ENST00000578252 CRELD2Q6UXH1 353 aaPredicted RBP12.15□□□□□ -0.46
TRAPPC8-204ENST00000578252 ZNF598Q86UK7 904 aaKnown RBP12.15□□□□□ -0.46
TRAPPC8-204ENST00000578252 RTN4RL1Q86UN2 441 aaPredicted RBP12.15□□□□□ -0.46
TRAPPC8-204ENST00000578252 NT5DC4Q86YG4 428 aa12.15□□□□□ -0.46
TRAPPC8-204ENST00000578252 CBWD2Q8IUF1 395 aa12.15□□□□□ -0.46
TRAPPC8-204ENST00000578252 CEP120Q8N960 986 aa12.15□□□□□ -0.46
TRAPPC8-204ENST00000578252 CNOT6LQ96LI5 555 aaKnown RBP12.15□□□□□ -0.46
TRAPPC8-204ENST00000578252 MFSD14AQ96MC6 490 aa12.15□□□□□ -0.46
TRAPPC8-204ENST00000578252 ASB7Q9H672 318 aa12.15□□□□□ -0.46
TRAPPC8-204ENST00000578252 FANCLQ9NW38 375 aa12.15□□□□□ -0.46
TRAPPC8-204ENST00000578252 SNTG2Q9NY99 539 aa12.15□□□□□ -0.46
TRAPPC8-204ENST00000578252 LRFN2Q9ULH4 789 aa12.15□□□□□ -0.46
TRAPPC8-204ENST00000578252 LOC101059915A0A1B0GWI6 518 aaPredicted RBP12.14□□□□□ -0.47
TRAPPC8-204ENST00000578252 KCNJ18B7U540 433 aa12.14□□□□□ -0.47
TRAPPC8-204ENST00000578252 TPM2P07951 284 aa12.14□□□□□ -0.47
TRAPPC8-204ENST00000578252 ACRP10323 421 aa12.14□□□□□ -0.47
TRAPPC8-204ENST00000578252 ZNF18P17022 549 aa12.14□□□□□ -0.47
TRAPPC8-204ENST00000578252 CDK11BP21127 795 aaKnown RBP12.14□□□□□ -0.47
TRAPPC8-204ENST00000578252 TNFSF9P41273 254 aa12.14□□□□□ -0.47
TRAPPC8-204ENST00000578252 AP3M2P53677 418 aa12.14□□□□□ -0.47
TRAPPC8-204ENST00000578252 MCCD1P59942 119 aaPredicted RBP12.14□□□□□ -0.47
TRAPPC8-204ENST00000578252 OSTNP61366 133 aa12.14□□□□□ -0.47
TRAPPC8-204ENST00000578252 BFSP1Q12934 665 aa12.14□□□□□ -0.47
TRAPPC8-204ENST00000578252 KCNJ12Q14500 433 aa12.14□□□□□ -0.47
TRAPPC8-204ENST00000578252 ENOX2Q16206 610 aaKnown RBP12.14□□□□□ -0.47
TRAPPC8-204ENST00000578252 TCTN1Q2MV58 587 aa12.14□□□□□ -0.47
TRAPPC8-204ENST00000578252 TMEM240Q5SV17 173 aa12.14□□□□□ -0.47
TRAPPC8-204ENST00000578252 ZBTB41Q5SVQ8 909 aa12.14□□□□□ -0.47
TRAPPC8-204ENST00000578252 GLB1LQ6UWU2 654 aa12.14□□□□□ -0.47
TRAPPC8-204ENST00000578252 ZNF365Q70YC5 407 aa12.14□□□□□ -0.47
TRAPPC8-204ENST00000578252 LUZP1Q86V48 1076 aa12.14□□□□□ -0.47
TRAPPC8-204ENST00000578252 RDH13Q8NBN7 331 aa12.14□□□□□ -0.47
TRAPPC8-204ENST00000578252 HERVK_113Q902F9 699 aa12.14□□□□□ -0.47
TRAPPC8-204ENST00000578252 EEF2KMTQ96G04 330 aa12.14□□□□□ -0.47
TRAPPC8-204ENST00000578252 SNX27Q96L92 541 aa12.14□□□□□ -0.47
TRAPPC8-204ENST00000578252 FNBP1Q96RU3 617 aa12.14□□□□□ -0.47
TRAPPC8-204ENST00000578252 RPS6KC1Q96S38 1066 aa12.14□□□□□ -0.47
TRAPPC8-204ENST00000578252 RSAD1Q9HA92 442 aa12.14□□□□□ -0.47
TRAPPC8-204ENST00000578252 SAMSN1Q9NSI8 373 aaKnown RBP12.14□□□□□ -0.47
TRAPPC8-204ENST00000578252 PARP2Q9UGN5 583 aa12.14□□□□□ -0.47
TRAPPC8-204ENST00000578252 DERAQ9Y315 318 aa12.14□□□□□ -0.47
TRAPPC8-204ENST00000578252 HES2Q9Y543 173 aa12.14□□□□□ -0.47
TRAPPC8-204ENST00000578252 PCDHB7Q9Y5E2 793 aa12.14□□□□□ -0.47
TRAPPC8-204ENST00000578252 MKI67P46013 3256 aaKnown RBP12.13□□□□□ -0.47
TRAPPC8-204ENST00000578252 TTC26A0AVF1 554 aa12.13□□□□□ -0.47
TRAPPC8-204ENST00000578252 INPPL1O15357 1258 aa12.13□□□□□ -0.47
TRAPPC8-204ENST00000578252 XPOTO43592 962 aaKnown RBP12.13□□□□□ -0.47
TRAPPC8-204ENST00000578252 CXCL8P10145 99 aa12.13□□□□□ -0.47
TRAPPC8-204ENST00000578252 ATF7P17544 494 aaPredicted RBP12.13□□□□□ -0.47
TRAPPC8-204ENST00000578252 FECHP22830 423 aa12.13□□□□□ -0.47
TRAPPC8-204ENST00000578252 MAGEA10P43363 369 aaPredicted RBP12.13□□□□□ -0.47
TRAPPC8-204ENST00000578252 MTIF2P46199 727 aaKnown RBP12.13□□□□□ -0.47
TRAPPC8-204ENST00000578252 VAMP7P51809 220 aa12.13□□□□□ -0.47
TRAPPC8-204ENST00000578252 WDR5P61964 334 aaKnown RBP12.13□□□□□ -0.47
TRAPPC8-204ENST00000578252 SLC10A6Q3KNW5 377 aa12.13□□□□□ -0.47
TRAPPC8-204ENST00000578252 SEZ6Q53EL9 994 aa12.13□□□□□ -0.47
TRAPPC8-204ENST00000578252 XKR4Q5GH76 650 aa12.13□□□□□ -0.47
TRAPPC8-204ENST00000578252 TCP11X2Q5H9J9 407 aa12.13□□□□□ -0.47
TRAPPC8-204ENST00000578252 AGMOQ6ZNB7 445 aa12.13□□□□□ -0.47
TRAPPC8-204ENST00000578252 C16orf59Q7L2K0 433 aa12.13□□□□□ -0.47
TRAPPC8-204ENST00000578252 OTOP2Q7RTS6 562 aa12.13□□□□□ -0.47
TRAPPC8-204ENST00000578252 IRF2BP1Q8IU81 584 aa12.13□□□□□ -0.47
TRAPPC8-204ENST00000578252 WDR49Q8IV35 697 aa12.13□□□□□ -0.47
TRAPPC8-204ENST00000578252 TRIM59Q8IWR1 403 aa12.13□□□□□ -0.47
TRAPPC8-204ENST00000578252 TMEM192Q8IY95 271 aa12.13□□□□□ -0.47
TRAPPC8-204ENST00000578252 ABI1Q8IZP0 508 aa12.13□□□□□ -0.47
TRAPPC8-204ENST00000578252 RNF169Q8NCN4 708 aa12.13□□□□□ -0.47
TRAPPC8-204ENST00000578252 URGCPQ8TCY9 931 aa12.13□□□□□ -0.47
TRAPPC8-204ENST00000578252 PARD3BQ8TEW8 1205 aa12.13□□□□□ -0.47
TRAPPC8-204ENST00000578252 BORCS6Q96GS4 357 aa12.13□□□□□ -0.47
TRAPPC8-204ENST00000578252 SLC9A7Q96T83 725 aa12.13□□□□□ -0.47
TRAPPC8-204ENST00000578252 CGRRF1Q99675 332 aa12.13□□□□□ -0.47
TRAPPC8-204ENST00000578252 BUD13Q9BRD0 619 aaKnown RBP eCLIP12.13□□□□□ -0.47
TRAPPC8-204ENST00000578252 APOL6Q9BWW8 343 aa12.13□□□□□ -0.47
TRAPPC8-204ENST00000578252 CNTN3Q9P232 1028 aa12.13□□□□□ -0.47
TRAPPC8-204ENST00000578252 C2CD2Q9Y426 696 aa12.13□□□□□ -0.47
TRAPPC8-204ENST00000578252 TDRD15B5MCY1 1934 aaKnown RBP12.13□□□□□ -0.47
TRAPPC8-204ENST00000578252 TRIP11Q15643 1979 aa12.12□□□□□ -0.47
TRAPPC8-204ENST00000578252 CEP290O15078 2479 aa12.12□□□□□ -0.47
TRAPPC8-204ENST00000578252 ZBBXA8MT70 800 aa12.12□□□□□ -0.47
TRAPPC8-204ENST00000578252 KCNE1P15382 129 aa12.12□□□□□ -0.47
TRAPPC8-204ENST00000578252 AKAP5P24588 427 aa12.12□□□□□ -0.47
TRAPPC8-204ENST00000578252 GTF2H1P32780 548 aa12.12□□□□□ -0.47
TRAPPC8-204ENST00000578252 EPHB4P54760 987 aa12.12□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 20.2 ms