RNA–Protein interactions for RNA: ENST00000578134.5

CDK5RAP3-207, Transcript of CDK5 regulatory subunit associated protein 3, humanhuman

TSL 3

Gene CDK5RAP3, Length 831 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP3-207ENST00000578134 CNKSR3Q6P9H4 555 aa18.32■□□□□ 0.52
CDK5RAP3-207ENST00000578134 RTN4RL1Q86UN2 441 aaPredicted RBP18.32■□□□□ 0.52
CDK5RAP3-207ENST00000578134 ECHDC2Q86YB7 292 aa18.32■□□□□ 0.52
CDK5RAP3-207ENST00000578134 CCDC150Q8NCX0 1101 aa18.32■□□□□ 0.52
CDK5RAP3-207ENST00000578134 ABHD8Q96I13 439 aa18.32■□□□□ 0.52
CDK5RAP3-207ENST00000578134 SCLYQ96I15 445 aa18.32■□□□□ 0.52
CDK5RAP3-207ENST00000578134 MMRN2Q9H8L6 949 aa18.32■□□□□ 0.52
CDK5RAP3-207ENST00000578134 RAB20Q9NX57 234 aa18.32■□□□□ 0.52
CDK5RAP3-207ENST00000578134 FBXL5Q9UKA1 691 aa18.32■□□□□ 0.52
CDK5RAP3-207ENST00000578134 A0A1W2PQJ5 194 aa18.31■□□□□ 0.52
CDK5RAP3-207ENST00000578134 TRIM43BA6NCK2 446 aa18.31■□□□□ 0.52
CDK5RAP3-207ENST00000578134 PHACTR2O75167 634 aa18.31■□□□□ 0.52
CDK5RAP3-207ENST00000578134 TRIM21P19474 475 aaKnown RBP18.31■□□□□ 0.52
CDK5RAP3-207ENST00000578134 PON1P27169 355 aa18.31■□□□□ 0.52
CDK5RAP3-207ENST00000578134 TFAMQ00059 246 aaKnown RBP18.31■□□□□ 0.52
CDK5RAP3-207ENST00000578134 TBX2Q13207 712 aaPredicted RBP18.31■□□□□ 0.52
CDK5RAP3-207ENST00000578134 BIRC3Q13489 604 aa18.31■□□□□ 0.52
CDK5RAP3-207ENST00000578134 IKBKEQ14164 716 aa18.31■□□□□ 0.52
CDK5RAP3-207ENST00000578134 ZBTB6Q15916 424 aa18.31■□□□□ 0.52
CDK5RAP3-207ENST00000578134 EPC2Q52LR7 807 aa18.31■□□□□ 0.52
CDK5RAP3-207ENST00000578134 JADE1Q6IE81 842 aa18.31■□□□□ 0.52
CDK5RAP3-207ENST00000578134 TRAPPC11Q7Z392 1133 aa18.31■□□□□ 0.52
CDK5RAP3-207ENST00000578134 ZNF397Q8NF99 534 aaPredicted RBP18.31■□□□□ 0.52
CDK5RAP3-207ENST00000578134 BEST2Q8NFU1 509 aa18.31■□□□□ 0.52
CDK5RAP3-207ENST00000578134 TAF4BQ92750 862 aa18.31■□□□□ 0.52
CDK5RAP3-207ENST00000578134 TRIM43Q96BQ3 446 aaPredicted RBP18.31■□□□□ 0.52
CDK5RAP3-207ENST00000578134 FAXDC2Q96IV6 333 aa18.31■□□□□ 0.52
CDK5RAP3-207ENST00000578134 PRDM5Q9NQX1 630 aaPredicted RBP18.31■□□□□ 0.52
CDK5RAP3-207ENST00000578134 SLC38A7Q9NVC3 462 aa18.31■□□□□ 0.52
CDK5RAP3-207ENST00000578134 TMEM161AQ9NX61 479 aa18.31■□□□□ 0.52
CDK5RAP3-207ENST00000578134 GCNT4Q9P109 453 aa18.31■□□□□ 0.52
CDK5RAP3-207ENST00000578134 UBQLN1Q9UMX0 589 aaKnown RBP18.31■□□□□ 0.52
CDK5RAP3-207ENST00000578134 R3HCC1Q9Y3T6 440 aaKnown RBP18.31■□□□□ 0.52
CDK5RAP3-207ENST00000578134 HES2Q9Y543 173 aa18.31■□□□□ 0.52
CDK5RAP3-207ENST00000578134 DNAH12Q6ZR08 3092 aa18.3■□□□□ 0.52
CDK5RAP3-207ENST00000578134 ABHD14A-ACY1A0A1B0GW23 586 aa18.3■□□□□ 0.52
CDK5RAP3-207ENST00000578134 TULP1O00294 542 aaPredicted RBP18.3■□□□□ 0.52
CDK5RAP3-207ENST00000578134 INPPL1O15357 1258 aa18.3■□□□□ 0.52
CDK5RAP3-207ENST00000578134 HOXA2O43364 376 aa18.3■□□□□ 0.52
CDK5RAP3-207ENST00000578134 AKAP5P24588 427 aa18.3■□□□□ 0.52
CDK5RAP3-207ENST00000578134 WDR44Q5JSH3 913 aa18.3■□□□□ 0.52
CDK5RAP3-207ENST00000578134 ZNF598Q86UK7 904 aaKnown RBP18.3■□□□□ 0.52
CDK5RAP3-207ENST00000578134 FMNL3Q8IVF7 1028 aa18.3■□□□□ 0.52
CDK5RAP3-207ENST00000578134 KIF12Q96FN5 646 aa18.3■□□□□ 0.52
CDK5RAP3-207ENST00000578134 CRACR2AQ9BSW2 395 aa18.3■□□□□ 0.52
CDK5RAP3-207ENST00000578134 APOL6Q9BWW8 343 aa18.3■□□□□ 0.52
CDK5RAP3-207ENST00000578134 NUCKS1Q9H1E3 243 aaKnown RBP18.3■□□□□ 0.52
CDK5RAP3-207ENST00000578134 RNF39Q9H2S5 420 aa18.3■□□□□ 0.52
CDK5RAP3-207ENST00000578134 ITGA11Q9UKX5 1188 aa18.3■□□□□ 0.52
CDK5RAP3-207ENST00000578134 CAPN11Q9UMQ6 739 aa18.3■□□□□ 0.52
CDK5RAP3-207ENST00000578134 SMIM28A0A1B0GU29 152 aa18.29■□□□□ 0.52
CDK5RAP3-207ENST00000578134 ATICP31939 592 aa18.29■□□□□ 0.52
CDK5RAP3-207ENST00000578134 WNT7BP56706 349 aa18.29■□□□□ 0.52
CDK5RAP3-207ENST00000578134 TRPC3Q13507 836 aa18.29■□□□□ 0.52
CDK5RAP3-207ENST00000578134 SGSM1Q2NKQ1 1148 aa18.29■□□□□ 0.52
CDK5RAP3-207ENST00000578134 KLHDC7AQ5VTJ3 777 aa18.29■□□□□ 0.52
CDK5RAP3-207ENST00000578134 TDRD10Q5VZ19 366 aaKnown RBP18.29■□□□□ 0.52
CDK5RAP3-207ENST00000578134 TRIM65Q6PJ69 517 aa18.29■□□□□ 0.52
CDK5RAP3-207ENST00000578134 AGMOQ6ZNB7 445 aa18.29■□□□□ 0.52
CDK5RAP3-207ENST00000578134 EFCAB13Q8IY85 973 aa18.29■□□□□ 0.52
CDK5RAP3-207ENST00000578134 OR5B17Q8NGF7 314 aa18.29■□□□□ 0.52
CDK5RAP3-207ENST00000578134 LMO3Q8TAP4 145 aa18.29■□□□□ 0.52
CDK5RAP3-207ENST00000578134 RPS6KC1Q96S38 1066 aa18.29■□□□□ 0.52
CDK5RAP3-207ENST00000578134 IMPG2Q9BZV3 1241 aa18.29■□□□□ 0.52
CDK5RAP3-207ENST00000578134 INTS2Q9H0H0 1204 aaKnown RBP18.29■□□□□ 0.52
CDK5RAP3-207ENST00000578134 RSAD1Q9HA92 442 aa18.29■□□□□ 0.52
CDK5RAP3-207ENST00000578134 CEP72Q9P209 647 aa18.29■□□□□ 0.52
CDK5RAP3-207ENST00000578134 KANSL3Q9P2N6 904 aa18.29■□□□□ 0.52
CDK5RAP3-207ENST00000578134 MYO6Q9UM54 1294 aa18.29■□□□□ 0.52
CDK5RAP3-207ENST00000578134 LUC7L2Q9Y383 392 aaKnown RBP18.29■□□□□ 0.52
CDK5RAP3-207ENST00000578134 PCDHB7Q9Y5E2 793 aa18.29■□□□□ 0.52
CDK5RAP3-207ENST00000578134 TANC1Q9C0D5 1861 aa18.29■□□□□ 0.52
CDK5RAP3-207ENST00000578134 MEFVO15553 781 aaPredicted RBP18.28■□□□□ 0.52
CDK5RAP3-207ENST00000578134 HLA-DRAP01903 254 aa18.28■□□□□ 0.52
CDK5RAP3-207ENST00000578134 THP07101 528 aa18.28■□□□□ 0.52
CDK5RAP3-207ENST00000578134 ACTN1P12814 892 aa18.28■□□□□ 0.52
CDK5RAP3-207ENST00000578134 SLC9A1P19634 815 aa18.28■□□□□ 0.52
CDK5RAP3-207ENST00000578134 PAX3P23760 479 aa18.28■□□□□ 0.52
CDK5RAP3-207ENST00000578134 RBP5P82980 135 aa18.28■□□□□ 0.52
CDK5RAP3-207ENST00000578134 PPIGQ13427 754 aaKnown RBP eCLIP18.28■□□□□ 0.523e-9■■■■□ 23.8
CDK5RAP3-207ENST00000578134 NCOA4Q13772 614 aa18.28■□□□□ 0.52
CDK5RAP3-207ENST00000578134 COL13A1Q5TAT6 717 aaPredicted RBP18.28■□□□□ 0.52
CDK5RAP3-207ENST00000578134 ENOSF1Q7L5Y1 443 aa18.28■□□□□ 0.52
CDK5RAP3-207ENST00000578134 DEFB128Q7Z7B8 93 aa18.28■□□□□ 0.52
CDK5RAP3-207ENST00000578134 CNGA4Q8IV77 575 aa18.28■□□□□ 0.52
CDK5RAP3-207ENST00000578134 SPC24Q8NBT2 197 aa18.28■□□□□ 0.52
CDK5RAP3-207ENST00000578134 TAS1R2Q8TE23 839 aa18.28■□□□□ 0.52
CDK5RAP3-207ENST00000578134 LSM14BQ9BX40 385 aaKnown RBP18.28■□□□□ 0.52
CDK5RAP3-207ENST00000578134 MTMR12Q9C0I1 747 aa18.28■□□□□ 0.52
CDK5RAP3-207ENST00000578134 DPP3Q9NY33 737 aa18.28■□□□□ 0.52
CDK5RAP3-207ENST00000578134 APEX2Q9UBZ4 518 aa18.28■□□□□ 0.52
CDK5RAP3-207ENST00000578134 BRCA2P51587 3418 aa18.28■□□□□ 0.52
CDK5RAP3-207ENST00000578134 PTPRJQ12913 1337 aa18.27■□□□□ 0.52
CDK5RAP3-207ENST00000578134 ARL5CA6NH57 179 aa18.27■□□□□ 0.52
CDK5RAP3-207ENST00000578134 AKR1B15C9JRZ8 316 aaPredicted RBP18.27■□□□□ 0.52
CDK5RAP3-207ENST00000578134 BAIAP3O94812 1187 aa18.27■□□□□ 0.52
CDK5RAP3-207ENST00000578134 STAU1O95793 577 aaKnown RBP18.27■□□□□ 0.52
CDK5RAP3-207ENST00000578134 NFICP08651 508 aa18.27■□□□□ 0.52
CDK5RAP3-207ENST00000578134 ATF7P17544 494 aaPredicted RBP18.27■□□□□ 0.52
CDK5RAP3-207ENST00000578134 PIK3CAP42336 1068 aa18.27■□□□□ 0.52
Retrieved 100 of 20,778 RNA–protein pairs in 24.9 ms