RNA–Protein interactions for RNA: ENST00000574095.1

NPLOC4-215, Transcript of NPL4 homolog, ubiquitin recognition factor, humanhuman

TSL 3

Gene NPLOC4, Length 277 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPLOC4-215ENST00000574095 TDRD5Q8NAT2 981 aaKnown RBP28.49■■■□□ 2.15
NPLOC4-215ENST00000574095 C3orf58Q8NDZ4 430 aa28.49■■■□□ 2.15
NPLOC4-215ENST00000574095 BICD1Q96G01 975 aa28.49■■■□□ 2.15
NPLOC4-215ENST00000574095 USP28Q96RU2 1077 aa28.49■■■□□ 2.15
NPLOC4-215ENST00000574095 CLSTN3Q9BQT9 956 aa28.49■■■□□ 2.15
NPLOC4-215ENST00000574095 HAPLN2Q9GZV7 340 aa28.49■■■□□ 2.15
NPLOC4-215ENST00000574095 PARVGQ9HBI0 331 aa28.49■■■□□ 2.15
NPLOC4-215ENST00000574095 TMEM221A6NGB7 291 aa28.48■■■□□ 2.15
NPLOC4-215ENST00000574095 M0R296 226 aa28.48■■■□□ 2.15
NPLOC4-215ENST00000574095 ZNF131P52739 623 aa28.48■■■□□ 2.15
NPLOC4-215ENST00000574095 CCDC149Q6ZUS6 474 aa28.48■■■□□ 2.15
NPLOC4-215ENST00000574095 HDAC7Q8WUI4 952 aa28.48■■■□□ 2.15
NPLOC4-215ENST00000574095 PLEKHA4Q9H4M7 779 aa28.48■■■□□ 2.15
NPLOC4-215ENST00000574095 SLC38A7Q9NVC3 462 aa28.48■■■□□ 2.15
NPLOC4-215ENST00000574095 CCDC39Q9UFE4 941 aa28.48■■■□□ 2.15
NPLOC4-215ENST00000574095 LIMD1Q9UGP4 676 aa28.48■■■□□ 2.15
NPLOC4-215ENST00000574095 USTQ9Y2C2 406 aa28.48■■■□□ 2.15
NPLOC4-215ENST00000574095 I3L4J1 428 aa28.47■■■□□ 2.15
NPLOC4-215ENST00000574095 K7ENM7 598 aa28.47■■■□□ 2.15
NPLOC4-215ENST00000574095 TRAK2O60296 914 aa28.47■■■□□ 2.15
NPLOC4-215ENST00000574095 C1RP00736 705 aa28.47■■■□□ 2.15
NPLOC4-215ENST00000574095 KCNE1P15382 129 aa28.47■■■□□ 2.15
NPLOC4-215ENST00000574095 BRCC3P46736 316 aa28.47■■■□□ 2.15
NPLOC4-215ENST00000574095 MCL1Q07820 350 aa28.47■■■□□ 2.15
NPLOC4-215ENST00000574095 SLC10A6Q3KNW5 377 aa28.47■■■□□ 2.15
NPLOC4-215ENST00000574095 PDZRN4Q6ZMN7 1036 aaPredicted RBP28.47■■■□□ 2.15
NPLOC4-215ENST00000574095 ZDHHC14Q8IZN3 488 aa28.47■■■□□ 2.15
NPLOC4-215ENST00000574095 KREMEN2Q8NCW0 462 aa28.47■■■□□ 2.15
NPLOC4-215ENST00000574095 SNX21Q969T3 373 aa28.47■■■□□ 2.15
NPLOC4-215ENST00000574095 C18orf25Q96B23 403 aaPredicted RBP28.47■■■□□ 2.15
NPLOC4-215ENST00000574095 ZSCAN16Q9H4T2 348 aaPredicted RBP28.47■■■□□ 2.15
NPLOC4-215ENST00000574095 CNTN3Q9P232 1028 aa28.47■■■□□ 2.15
NPLOC4-215ENST00000574095 TBX20Q9UMR3 447 aa28.47■■■□□ 2.15
NPLOC4-215ENST00000574095 ADAM12O43184 909 aa28.46■■■□□ 2.15
NPLOC4-215ENST00000574095 FGFR3P22607 806 aa28.46■■■□□ 2.15
NPLOC4-215ENST00000574095 PLCD3Q8N3E9 789 aa28.46■■■□□ 2.15
NPLOC4-215ENST00000574095 KCNN1Q92952 543 aa28.46■■■□□ 2.15
NPLOC4-215ENST00000574095 ZNF707Q96C28 371 aaPredicted RBP28.46■■■□□ 2.15
NPLOC4-215ENST00000574095 DDX27Q96GQ7 796 aaKnown RBP28.46■■■□□ 2.15
NPLOC4-215ENST00000574095 PDCD11Q14690 1871 aaKnown RBP28.46■■■□□ 2.15
NPLOC4-215ENST00000574095 PODXLO00592 558 aa28.45■■■□□ 2.14
NPLOC4-215ENST00000574095 TBCAO75347 108 aaKnown RBP28.45■■■□□ 2.14
NPLOC4-215ENST00000574095 ASGR2P07307 311 aa28.45■■■□□ 2.14
NPLOC4-215ENST00000574095 NMT1P30419 496 aaKnown RBP28.45■■■□□ 2.14
NPLOC4-215ENST00000574095 LIG4P49917 911 aa28.45■■■□□ 2.14
NPLOC4-215ENST00000574095 SIGLEC14Q08ET2 396 aa28.45■■■□□ 2.14
NPLOC4-215ENST00000574095 SMG7Q92540 1137 aaKnown RBP28.45■■■□□ 2.14
NPLOC4-215ENST00000574095 PBXIP1Q96AQ6 731 aa28.45■■■□□ 2.14
NPLOC4-215ENST00000574095 ACSF2Q96CM8 615 aaPredicted RBP28.45■■■□□ 2.14
NPLOC4-215ENST00000574095 TKTP29401 623 aaKnown RBP28.44■■■□□ 2.14
NPLOC4-215ENST00000574095 SLC39A14Q15043 492 aa28.44■■■□□ 2.14
NPLOC4-215ENST00000574095 RRAGBQ5VZM2 374 aa28.44■■■□□ 2.14
NPLOC4-215ENST00000574095 PDXDC1Q6P996 788 aa28.44■■■□□ 2.14
NPLOC4-215ENST00000574095 CYP26C1Q6V0L0 522 aa28.44■■■□□ 2.14
NPLOC4-215ENST00000574095 OTOP3Q7RTS5 596 aa28.44■■■□□ 2.14
NPLOC4-215ENST00000574095 DYMQ7RTS9 669 aa28.44■■■□□ 2.14
NPLOC4-215ENST00000574095 FIZ1Q96SL8 496 aa28.44■■■□□ 2.14
NPLOC4-215ENST00000574095 PIDD1Q9HB75 910 aa28.44■■■□□ 2.14
NPLOC4-215ENST00000574095 SORCS3Q9UPU3 1222 aa28.44■■■□□ 2.14
NPLOC4-215ENST00000574095 HNRNPDLO14979 420 aaKnown RBP28.43■■■□□ 2.14
NPLOC4-215ENST00000574095 TRAPPC3O43617 180 aa28.43■■■□□ 2.14
NPLOC4-215ENST00000574095 CXCL8P10145 99 aa28.43■■■□□ 2.14
NPLOC4-215ENST00000574095 TNFSF9P41273 254 aa28.43■■■□□ 2.14
NPLOC4-215ENST00000574095 SPAG1Q07617 926 aa28.43■■■□□ 2.14
NPLOC4-215ENST00000574095 BMP8AQ7Z5Y6 402 aa28.43■■■□□ 2.14
NPLOC4-215ENST00000574095 KRI1Q8N9T8 703 aaKnown RBP28.43■■■□□ 2.14
NPLOC4-215ENST00000574095 MFSD14AQ96MC6 490 aa28.43■■■□□ 2.14
NPLOC4-215ENST00000574095 RHOBTB2Q9BYZ6 727 aa28.43■■■□□ 2.14
NPLOC4-215ENST00000574095 PANK2Q9BZ23 570 aa28.43■■■□□ 2.14
NPLOC4-215ENST00000574095 PRKD2Q9BZL6 878 aa28.43■■■□□ 2.14
NPLOC4-215ENST00000574095 SMOC2Q9H3U7 446 aa28.43■■■□□ 2.14
NPLOC4-215ENST00000574095 WDR6Q9NNW5 1121 aaKnown RBP28.43■■■□□ 2.14
NPLOC4-215ENST00000574095 ZDHHC7Q9NXF8 308 aa28.43■■■□□ 2.14
NPLOC4-215ENST00000574095 STK17AQ9UEE5 414 aa28.43■■■□□ 2.14
NPLOC4-215ENST00000574095 FBXW11Q9UKB1 542 aa28.43■■■□□ 2.14
NPLOC4-215ENST00000574095 GTF3C3Q9Y5Q9 886 aa28.43■■■□□ 2.14
NPLOC4-215ENST00000574095 MYH15Q9Y2K3 1946 aa28.42■■■□□ 2.14
NPLOC4-215ENST00000574095 ZMYND10O75800 440 aa28.42■■■□□ 2.14
NPLOC4-215ENST00000574095 OR1D2P34982 312 aa28.42■■■□□ 2.14
NPLOC4-215ENST00000574095 TXLNAP40222 546 aa28.42■■■□□ 2.14
NPLOC4-215ENST00000574095 RSPO2Q6UXX9 243 aaPredicted RBP28.42■■■□□ 2.14
NPLOC4-215ENST00000574095 TMEM130Q8N3G9 435 aa28.42■■■□□ 2.14
NPLOC4-215ENST00000574095 MTRRQ9UBK8 725 aa28.42■■■□□ 2.14
NPLOC4-215ENST00000574095 PAPLNO95428 1278 aa28.41■■■□□ 2.14
NPLOC4-215ENST00000574095 PIGRP01833 764 aa28.41■■■□□ 2.14
NPLOC4-215ENST00000574095 CLTAP09496 248 aa28.41■■■□□ 2.14
NPLOC4-215ENST00000574095 SCP2P22307 547 aa28.41■■■□□ 2.14
NPLOC4-215ENST00000574095 RPL9P32969 192 aaKnown RBP28.41■■■□□ 2.14
NPLOC4-215ENST00000574095 GTF2BQ00403 316 aa28.41■■■□□ 2.14
NPLOC4-215ENST00000574095 MTMR3Q13615 1198 aa28.41■■■□□ 2.14
NPLOC4-215ENST00000574095 ZC2HC1CQ53FD0 456 aaPredicted RBP28.41■■■□□ 2.14
NPLOC4-215ENST00000574095 ZBTB41Q5SVQ8 909 aa28.41■■■□□ 2.14
NPLOC4-215ENST00000574095 HSCBQ8IWL3 235 aa28.41■■■□□ 2.14
NPLOC4-215ENST00000574095 ASIC4Q96FT7 647 aa28.41■■■□□ 2.14
NPLOC4-215ENST00000574095 TUBGCP4Q9UGJ1 667 aa28.41■■■□□ 2.14
NPLOC4-215ENST00000574095 ARIH1Q9Y4X5 557 aaPredicted RBP28.41■■■□□ 2.14
NPLOC4-215ENST00000574095 CDY1Q9Y6F8 540 aa28.41■■■□□ 2.14
NPLOC4-215ENST00000574095 MORC2Q9Y6X9 1032 aaPredicted RBP28.41■■■□□ 2.14
NPLOC4-215ENST00000574095 CLUHO75153 1309 aa28.41■■■□□ 2.14
NPLOC4-215ENST00000574095 N4BP1O75113 896 aaKnown RBP28.4■■■□□ 2.14
Retrieved 100 of 20,778 RNA–protein pairs in 13.5 ms