RNA–Protein interactions for RNA: ENST00000573795.5

SNF8-216, Transcript of SNF8, ESCRT-II complex subunit, humanhuman

TSL 5

Gene SNF8, Length 583 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNF8-216ENST00000573795 XKR4Q5GH76 650 aa24.17■■□□□ 1.46
SNF8-216ENST00000573795 SPECC1Q5M775 1068 aa24.17■■□□□ 1.46
SNF8-216ENST00000573795 DCLRE1AQ6PJP8 1040 aa24.17■■□□□ 1.46
SNF8-216ENST00000573795 IGSF22Q8N9C0 903 aa24.17■■□□□ 1.46
SNF8-216ENST00000573795 FOXQ1Q9C009 403 aa24.17■■□□□ 1.46
SNF8-216ENST00000573795 CDT1Q9H211 546 aa24.17■■□□□ 1.46
SNF8-216ENST00000573795 PTPRHQ9HD43 1115 aa24.17■■□□□ 1.46
SNF8-216ENST00000573795 CDY1Q9Y6F8 540 aa24.17■■□□□ 1.46
SNF8-216ENST00000573795 EP300Q09472 2414 aaPredicted RBP24.16■■□□□ 1.46
SNF8-216ENST00000573795 PHLPP2Q6ZVD8 1323 aa24.16■■□□□ 1.46
SNF8-216ENST00000573795 SMIM28A0A1B0GU29 152 aa24.16■■□□□ 1.46
SNF8-216ENST00000573795 I3L4J1 428 aa24.16■■□□□ 1.46
SNF8-216ENST00000573795 BRCC3P46736 316 aa24.16■■□□□ 1.46
SNF8-216ENST00000573795 ALKAL1Q6UXT8 129 aa24.16■■□□□ 1.46
SNF8-216ENST00000573795 SNX29Q8TEQ0 813 aa24.16■■□□□ 1.46
SNF8-216ENST00000573795 UROC1Q96N76 676 aa24.16■■□□□ 1.46
SNF8-216ENST00000573795 ACO2Q99798 780 aaKnown RBP24.16■■□□□ 1.46
SNF8-216ENST00000573795 DNMT3BQ9UBC3 853 aaKnown RBP24.16■■□□□ 1.46
SNF8-216ENST00000573795 POLIQ9UNA4 740 aa24.16■■□□□ 1.46
SNF8-216ENST00000573795 BACE2Q9Y5Z0 518 aa24.16■■□□□ 1.46
SNF8-216ENST00000573795 CACNA1IQ9P0X4 2223 aa24.16■■□□□ 1.46
SNF8-216ENST00000573795 CITO14578 2027 aa24.16■■□□□ 1.46
SNF8-216ENST00000573795 PDCD11Q14690 1871 aaKnown RBP24.15■■□□□ 1.46
SNF8-216ENST00000573795 PP2D1A8MPX8 630 aa24.15■■□□□ 1.46
SNF8-216ENST00000573795 E9PMD0 336 aa24.15■■□□□ 1.46
SNF8-216ENST00000573795 K7ERI5 159 aa24.15■■□□□ 1.46
SNF8-216ENST00000573795 ABLIM1O14639 778 aa24.15■■□□□ 1.46
SNF8-216ENST00000573795 XYLBO75191 536 aa24.15■■□□□ 1.46
SNF8-216ENST00000573795 LRRN2O75325 713 aa24.15■■□□□ 1.46
SNF8-216ENST00000573795 GRM5P41594 1212 aa24.15■■□□□ 1.46
SNF8-216ENST00000573795 NPTX2P47972 431 aa24.15■■□□□ 1.46
SNF8-216ENST00000573795 STARD6P59095 220 aa24.15■■□□□ 1.46
SNF8-216ENST00000573795 HMGN5P82970 282 aaKnown RBP24.15■■□□□ 1.46
SNF8-216ENST00000573795 MAPK7Q13164 816 aa24.15■■□□□ 1.46
SNF8-216ENST00000573795 PDIA5Q14554 519 aa24.15■■□□□ 1.46
SNF8-216ENST00000573795 IL17AQ16552 155 aa24.15■■□□□ 1.46
SNF8-216ENST00000573795 UVSSAQ2YD98 709 aa24.15■■□□□ 1.46
SNF8-216ENST00000573795 POTEHQ6S545 545 aa24.15■■□□□ 1.46
SNF8-216ENST00000573795 NPAS3Q8IXF0 933 aa24.15■■□□□ 1.46
SNF8-216ENST00000573795 PJA1Q8NG27 643 aa24.15■■□□□ 1.46
SNF8-216ENST00000573795 ZMAT2Q96NC0 199 aaKnown RBP24.15■■□□□ 1.46
SNF8-216ENST00000573795 KIF2CQ99661 725 aa24.15■■□□□ 1.46
SNF8-216ENST00000573795 ARHGAP28Q9P2N2 729 aa24.15■■□□□ 1.46
SNF8-216ENST00000573795 DAXXQ9UER7 740 aaPredicted RBP24.15■■□□□ 1.46
SNF8-216ENST00000573795 SIT1Q9Y3P8 196 aa24.15■■□□□ 1.46
SNF8-216ENST00000573795 PCDHB6Q9Y5E3 794 aa24.15■■□□□ 1.46
SNF8-216ENST00000573795 PATJQ8NI35 1801 aa24.14■■□□□ 1.46
SNF8-216ENST00000573795 MEFVO15553 781 aaPredicted RBP24.14■■□□□ 1.45
SNF8-216ENST00000573795 U2AF2P26368 475 aaKnown RBP eCLIP24.14■■□□□ 1.458e-7■□□□□ 10.3
SNF8-216ENST00000573795 PEX3P56589 373 aa24.14■■□□□ 1.45
SNF8-216ENST00000573795 PTGDRQ13258 359 aa24.14■■□□□ 1.45
SNF8-216ENST00000573795 RUSC1Q9BVN2 902 aa24.14■■□□□ 1.45
SNF8-216ENST00000573795 NOL7Q9UMY1 257 aaKnown RBP24.14■■□□□ 1.45
SNF8-216ENST00000573795 R4GN57 208 aa24.14■■□□□ 1.45
SNF8-216ENST00000573795 DNAH14Q0VDD8 3507 aa24.13■■□□□ 1.45
SNF8-216ENST00000573795 HIP1RO75146 1068 aa24.13■■□□□ 1.45
SNF8-216ENST00000573795 PROZP22891 400 aa24.13■■□□□ 1.45
SNF8-216ENST00000573795 ZNF568Q3ZCX4 644 aa24.13■■□□□ 1.45
SNF8-216ENST00000573795 MTSS1LQ765P7 747 aa24.13■■□□□ 1.45
SNF8-216ENST00000573795 KCNK18Q7Z418 384 aa24.13■■□□□ 1.45
SNF8-216ENST00000573795 MMTAG2Q9BU76 263 aaKnown RBP24.13■■□□□ 1.45
SNF8-216ENST00000573795 DDX23Q9BUQ8 820 aaKnown RBP24.13■■□□□ 1.45
SNF8-216ENST00000573795 TARS2Q9BW92 718 aaKnown RBP24.13■■□□□ 1.45
SNF8-216ENST00000573795 TMEM134Q9H6X4 195 aa24.13■■□□□ 1.45
SNF8-216ENST00000573795 CCDC169A6NNP5 214 aa24.12■■□□□ 1.45
SNF8-216ENST00000573795 EIF5BO60841 1220 aaKnown RBP24.12■■□□□ 1.45
SNF8-216ENST00000573795 OSTNP61366 133 aa24.12■■□□□ 1.45
SNF8-216ENST00000573795 SNW1Q13573 536 aaKnown RBP24.12■■□□□ 1.45
SNF8-216ENST00000573795 GNL2Q13823 731 aaKnown RBP24.12■■□□□ 1.45
SNF8-216ENST00000573795 SLC5A9Q2M3M2 681 aa24.12■■□□□ 1.45
SNF8-216ENST00000573795 PABPC1LQ4VXU2 614 aaKnown RBP24.12■■□□□ 1.45
SNF8-216ENST00000573795 SLC8B1Q6J4K2 584 aa24.12■■□□□ 1.45
SNF8-216ENST00000573795 ANKS3Q6ZW76 656 aa24.12■■□□□ 1.45
SNF8-216ENST00000573795 MAML2Q8IZL2 1156 aaPredicted RBP24.12■■□□□ 1.45
SNF8-216ENST00000573795 ING5Q8WYH8 240 aa24.12■■□□□ 1.45
SNF8-216ENST00000573795 KXD1Q9BQD3 176 aa24.12■■□□□ 1.45
SNF8-216ENST00000573795 KCNH3Q9ULD8 1083 aa24.12■■□□□ 1.45
SNF8-216ENST00000573795 OTOGLQ3ZCN5 2332 aa24.11■■□□□ 1.45
SNF8-216ENST00000573795 TBC1D4O60343 1298 aa24.11■■□□□ 1.45
SNF8-216ENST00000573795 CDC25AP30304 524 aa24.11■■□□□ 1.45
SNF8-216ENST00000573795 ROR1Q01973 937 aa24.11■■□□□ 1.45
SNF8-216ENST00000573795 RINT1Q6NUQ1 792 aa24.11■■□□□ 1.45
SNF8-216ENST00000573795 C1orf186Q6ZWK4 172 aa24.11■■□□□ 1.45
SNF8-216ENST00000573795 RTL10Q7L3V2 364 aa24.11■■□□□ 1.45
SNF8-216ENST00000573795 APBB1IPQ7Z5R6 666 aaPredicted RBP24.11■■□□□ 1.45
SNF8-216ENST00000573795 C1orf210Q8IVY1 113 aa24.11■■□□□ 1.45
SNF8-216ENST00000573795 FAM184AQ8NB25 1140 aa24.11■■□□□ 1.45
SNF8-216ENST00000573795 ZSCAN31Q96LW9 406 aaPredicted RBP24.11■■□□□ 1.45
SNF8-216ENST00000573795 CCDC94Q9BW85 323 aaPredicted RBP24.11■■□□□ 1.45
SNF8-216ENST00000573795 MRPL4Q9BYD3 311 aaKnown RBP24.11■■□□□ 1.45
SNF8-216ENST00000573795 CACNA1AO00555 2505 aa24.11■■□□□ 1.45
SNF8-216ENST00000573795 WDR27A2RRH5 827 aa24.1■■□□□ 1.45
SNF8-216ENST00000573795 PODXLO00592 558 aa24.1■■□□□ 1.45
SNF8-216ENST00000573795 TRAPPC3O43617 180 aa24.1■■□□□ 1.45
SNF8-216ENST00000573795 SP9P0CG40 484 aa24.1■■□□□ 1.45
SNF8-216ENST00000573795 KCNE1P15382 129 aa24.1■■□□□ 1.45
SNF8-216ENST00000573795 YARSP54577 528 aaKnown RBP24.1■■□□□ 1.45
SNF8-216ENST00000573795 MLF2Q15773 248 aaPredicted RBP24.1■■□□□ 1.45
SNF8-216ENST00000573795 VARS2Q5ST30 1063 aaKnown RBP24.1■■□□□ 1.45
SNF8-216ENST00000573795 SH2B1Q9NRF2 756 aaPredicted RBP24.1■■□□□ 1.45
Retrieved 100 of 20,778 RNA–protein pairs in 39.2 ms