RNA–Protein interactions for RNA: ENST00000572778.5

CHMP6-204, Transcript of charged multivesicular body protein 6, humanhuman

TSL 2

Gene CHMP6, Length 737 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP6-204ENST00000572778 B3GAT3O94766 335 aa22.53■■□□□ 1.2
CHMP6-204ENST00000572778 PRPF6O94906 941 aaKnown RBP22.53■■□□□ 1.2
CHMP6-204ENST00000572778 EFEMP2O95967 443 aa22.53■■□□□ 1.2
CHMP6-204ENST00000572778 SLFN14P0C7P3 912 aa22.53■■□□□ 1.2
CHMP6-204ENST00000572778 IL9P15248 144 aa22.53■■□□□ 1.2
CHMP6-204ENST00000572778 KLRC2P26717 231 aa22.53■■□□□ 1.2
CHMP6-204ENST00000572778 GLUD2P49448 558 aa22.53■■□□□ 1.2
CHMP6-204ENST00000572778 SOX4Q06945 474 aaPredicted RBP22.53■■□□□ 1.2
CHMP6-204ENST00000572778 USP41Q3LFD5 358 aa22.53■■□□□ 1.2
CHMP6-204ENST00000572778 CNNM4Q6P4Q7 775 aa22.53■■□□□ 1.2
CHMP6-204ENST00000572778 DCLRE1AQ6PJP8 1040 aa22.53■■□□□ 1.2
CHMP6-204ENST00000572778 STXBP4Q6ZWJ1 553 aa22.53■■□□□ 1.2
CHMP6-204ENST00000572778 GRAMD1CQ8IYS0 662 aa22.53■■□□□ 1.2
CHMP6-204ENST00000572778 RNF168Q8IYW5 571 aaPredicted RBP22.53■■□□□ 1.2
CHMP6-204ENST00000572778 POMGNT1Q8WZA1 660 aa22.53■■□□□ 1.2
CHMP6-204ENST00000572778 C18orf25Q96B23 403 aaPredicted RBP22.53■■□□□ 1.2
CHMP6-204ENST00000572778 FAM212AQ96EL1 285 aa22.53■■□□□ 1.2
CHMP6-204ENST00000572778 MSLNLQ96KJ4 702 aa22.53■■□□□ 1.2
CHMP6-204ENST00000572778 KLHL5Q96PQ7 755 aa22.53■■□□□ 1.2
CHMP6-204ENST00000572778 UHRF1Q96T88 793 aaPredicted RBP22.53■■□□□ 1.2
CHMP6-204ENST00000572778 PLEKHA5Q9HAU0 1116 aa22.53■■□□□ 1.2
CHMP6-204ENST00000572778 FAM50BQ9Y247 325 aa22.53■■□□□ 1.2
CHMP6-204ENST00000572778 HPSEQ9Y251 543 aa22.53■■□□□ 1.2
CHMP6-204ENST00000572778 ACTN4O43707 911 aaKnown RBP22.52■■□□□ 1.2
CHMP6-204ENST00000572778 LILRB3O75022 631 aa22.52■■□□□ 1.2
CHMP6-204ENST00000572778 CNPP09543 421 aaKnown RBP22.52■■□□□ 1.2
CHMP6-204ENST00000572778 SYKP43405 635 aa22.52■■□□□ 1.2
CHMP6-204ENST00000572778 DSG1Q02413 1049 aa22.52■■□□□ 1.2
CHMP6-204ENST00000572778 PPP2R3AQ06190 1150 aa22.52■■□□□ 1.2
CHMP6-204ENST00000572778 SPAG1Q07617 926 aa22.52■■□□□ 1.2
CHMP6-204ENST00000572778 CUL4BQ13620 913 aa22.52■■□□□ 1.2
CHMP6-204ENST00000572778 KCNC3Q14003 757 aa22.52■■□□□ 1.2
CHMP6-204ENST00000572778 POSTNQ15063 836 aa22.52■■□□□ 1.2
CHMP6-204ENST00000572778 ENOX2Q16206 610 aaKnown RBP22.52■■□□□ 1.2
CHMP6-204ENST00000572778 KIAA0319Q5VV43 1072 aa22.52■■□□□ 1.2
CHMP6-204ENST00000572778 UNC13DQ70J99 1090 aa22.52■■□□□ 1.2
CHMP6-204ENST00000572778 FSIP1Q8NA03 581 aa22.52■■□□□ 1.2
CHMP6-204ENST00000572778 CASP10Q92851 521 aa22.52■■□□□ 1.2
CHMP6-204ENST00000572778 NECAB3Q96P71 396 aaPredicted RBP22.52■■□□□ 1.2
CHMP6-204ENST00000572778 CHST7Q9NS84 486 aa22.52■■□□□ 1.2
CHMP6-204ENST00000572778 AGO2Q9UKV8 859 aaKnown RBP22.52■■□□□ 1.2
CHMP6-204ENST00000572778 STYXL1Q9Y6J8 313 aa22.52■■□□□ 1.2
CHMP6-204ENST00000572778 TDRD15B5MCY1 1934 aaKnown RBP22.51■■□□□ 1.19
CHMP6-204ENST00000572778 TTC26A0AVF1 554 aa22.51■■□□□ 1.19
CHMP6-204ENST00000572778 LACTBL1A8MY62 500 aa22.51■■□□□ 1.19
CHMP6-204ENST00000572778 MBTPS2O43462 519 aa22.51■■□□□ 1.19
CHMP6-204ENST00000572778 FAM189A1O60320 539 aa22.51■■□□□ 1.19
CHMP6-204ENST00000572778 IGFBP6P24592 240 aaPredicted RBP22.51■■□□□ 1.19
CHMP6-204ENST00000572778 ACOT2P49753 483 aa22.51■■□□□ 1.19
CHMP6-204ENST00000572778 NDUFA8P51970 172 aa22.51■■□□□ 1.19
CHMP6-204ENST00000572778 SMAD4Q13485 552 aaKnown RBP22.51■■□□□ 1.19
CHMP6-204ENST00000572778 UPP1Q16831 310 aa22.51■■□□□ 1.19
CHMP6-204ENST00000572778 FAM26FQ5R3K3 315 aa22.51■■□□□ 1.19
CHMP6-204ENST00000572778 FAM171A1Q5VUB5 890 aa22.51■■□□□ 1.19
CHMP6-204ENST00000572778 TMEM184AQ6ZMB5 413 aa22.51■■□□□ 1.19
CHMP6-204ENST00000572778 CEP57Q86XR8 500 aa22.51■■□□□ 1.19
CHMP6-204ENST00000572778 GLIS3Q8NEA6 775 aa22.51■■□□□ 1.19
CHMP6-204ENST00000572778 RIN2Q8WYP3 895 aaPredicted RBP22.51■■□□□ 1.19
CHMP6-204ENST00000572778 KIF12Q96FN5 646 aa22.51■■□□□ 1.19
CHMP6-204ENST00000572778 DDX27Q96GQ7 796 aaKnown RBP22.51■■□□□ 1.19
CHMP6-204ENST00000572778 PAGE5Q96GU1 130 aa22.51■■□□□ 1.19
CHMP6-204ENST00000572778 TMEM206Q9H813 350 aa22.51■■□□□ 1.19
CHMP6-204ENST00000572778 USP25Q9UHP3 1055 aa22.51■■□□□ 1.19
CHMP6-204ENST00000572778 CPSF3Q9UKF6 684 aaKnown RBP22.51■■□□□ 1.19
CHMP6-204ENST00000572778 A0A1W2PQ27 194 aa22.5■■□□□ 1.19
CHMP6-204ENST00000572778 A0A1W2PQ64 194 aa22.5■■□□□ 1.19
CHMP6-204ENST00000572778 A0A1W2PQD8 194 aa22.5■■□□□ 1.19
CHMP6-204ENST00000572778 PODXLO00592 558 aa22.5■■□□□ 1.19
CHMP6-204ENST00000572778 EPCAMP16422 314 aa22.5■■□□□ 1.19
CHMP6-204ENST00000572778 ADSSP30520 456 aa22.5■■□□□ 1.19
CHMP6-204ENST00000572778 ELAVL2Q12926 359 aaKnown RBP22.5■■□□□ 1.19
CHMP6-204ENST00000572778 ANKRD54Q6NXT1 300 aa22.5■■□□□ 1.19
CHMP6-204ENST00000572778 PPFIBP1Q86W92 1011 aa22.5■■□□□ 1.19
CHMP6-204ENST00000572778 APOL5Q9BWW9 433 aa22.5■■□□□ 1.19
CHMP6-204ENST00000572778 FAM237AA0A1B0GTK4 181 aa22.49■■□□□ 1.19
CHMP6-204ENST00000572778 PVALEFA0A1B0GWK0 134 aa22.49■■□□□ 1.19
CHMP6-204ENST00000572778 TMEM189-UBE2V1I3L0A0 370 aa22.49■■□□□ 1.19
CHMP6-204ENST00000572778 TULP1O00294 542 aaPredicted RBP22.49■■□□□ 1.19
CHMP6-204ENST00000572778 RPL9P32969 192 aaKnown RBP22.49■■□□□ 1.19
CHMP6-204ENST00000572778 RTP2Q5QGT7 225 aa22.49■■□□□ 1.19
CHMP6-204ENST00000572778 C3orf58Q8NDZ4 430 aa22.49■■□□□ 1.19
CHMP6-204ENST00000572778 TTPALQ9BTX7 342 aa22.49■■□□□ 1.19
CHMP6-204ENST00000572778 GOLPH3LQ9H4A5 285 aa22.49■■□□□ 1.19
CHMP6-204ENST00000572778 TUBGCP4Q9UGJ1 667 aa22.49■■□□□ 1.19
CHMP6-204ENST00000572778 A0A0C4DFX4 3053 aa22.49■■□□□ 1.19
CHMP6-204ENST00000572778 GOLGA6L4A6NEF3 574 aa22.48■■□□□ 1.19
CHMP6-204ENST00000572778 TEX28O15482 410 aa22.48■■□□□ 1.19
CHMP6-204ENST00000572778 TRAPPC3O43617 180 aa22.48■■□□□ 1.19
CHMP6-204ENST00000572778 BRCC3P46736 316 aa22.48■■□□□ 1.19
CHMP6-204ENST00000572778 PRSS55Q6UWB4 352 aaPredicted RBP22.48■■□□□ 1.19
CHMP6-204ENST00000572778 CD302Q8IX05 232 aa22.48■■□□□ 1.19
CHMP6-204ENST00000572778 SMRP1Q8NCR6 262 aa22.48■■□□□ 1.19
CHMP6-204ENST00000572778 SLC22A17Q8WUG5 538 aa22.48■■□□□ 1.19
CHMP6-204ENST00000572778 RXFP1Q9HBX9 757 aa22.48■■□□□ 1.19
CHMP6-204ENST00000572778 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP22.48■■□□□ 1.19
CHMP6-204ENST00000572778 UBQLN1Q9UMX0 589 aaKnown RBP22.48■■□□□ 1.19
CHMP6-204ENST00000572778 SPDYE4A6NLX3 237 aa22.47■■□□□ 1.19
CHMP6-204ENST00000572778 I3L4J1 428 aa22.47■■□□□ 1.19
CHMP6-204ENST00000572778 ADH1AP07327 375 aa22.47■■□□□ 1.19
CHMP6-204ENST00000572778 HOXB8P17481 243 aaPredicted RBP22.47■■□□□ 1.19
Retrieved 100 of 20,778 RNA–protein pairs in 24.8 ms