RNA–Protein interactions for RNA: ENST00000572346.5

NPLOC4-207, Transcript of NPL4 homolog, ubiquitin recognition factor, humanhuman

TSL 4

Gene NPLOC4, Length 567 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPLOC4-207ENST00000572346 PADI6Q6TGC4 694 aa16.27■□□□□ 0.2
NPLOC4-207ENST00000572346 CEP57Q86XR8 500 aa16.27■□□□□ 0.2
NPLOC4-207ENST00000572346 IGSF22Q8N9C0 903 aa16.27■□□□□ 0.2
NPLOC4-207ENST00000572346 KRI1Q8N9T8 703 aaKnown RBP16.27■□□□□ 0.2
NPLOC4-207ENST00000572346 RASSF8Q8NHQ8 419 aa16.27■□□□□ 0.2
NPLOC4-207ENST00000572346 LNX1Q8TBB1 728 aaPredicted RBP16.27■□□□□ 0.2
NPLOC4-207ENST00000572346 KCNG4Q8TDN1 519 aa16.27■□□□□ 0.2
NPLOC4-207ENST00000572346 GPR152Q8TDT2 470 aa16.27■□□□□ 0.2
NPLOC4-207ENST00000572346 SNX29Q8TEQ0 813 aa16.27■□□□□ 0.2
NPLOC4-207ENST00000572346 AK8Q96MA6 479 aa16.27■□□□□ 0.2
NPLOC4-207ENST00000572346 CCDC113Q9H0I3 377 aa16.27■□□□□ 0.2
NPLOC4-207ENST00000572346 TBC1D17Q9HA65 648 aa16.27■□□□□ 0.2
NPLOC4-207ENST00000572346 FBXW11Q9UKB1 542 aa16.27■□□□□ 0.2
NPLOC4-207ENST00000572346 SRPRBQ9Y5M8 271 aaKnown RBP16.27■□□□□ 0.2
NPLOC4-207ENST00000572346 ACKR2O00590 384 aa16.26■□□□□ 0.19
NPLOC4-207ENST00000572346 PPP6R2O75170 966 aa16.26■□□□□ 0.19
NPLOC4-207ENST00000572346 PRKCBP05771 671 aa16.26■□□□□ 0.19
NPLOC4-207ENST00000572346 CYP11B2P19099 503 aa16.26■□□□□ 0.19
NPLOC4-207ENST00000572346 RPA1P27694 616 aa16.26■□□□□ 0.19
NPLOC4-207ENST00000572346 UBA7P41226 1012 aa16.26■□□□□ 0.19
NPLOC4-207ENST00000572346 NAMPTP43490 491 aa16.26■□□□□ 0.19
NPLOC4-207ENST00000572346 ME1P48163 572 aa16.26■□□□□ 0.19
NPLOC4-207ENST00000572346 EEF1DP3Q658K8 133 aa16.26■□□□□ 0.19
NPLOC4-207ENST00000572346 GRASPQ7Z6J2 395 aaPredicted RBP16.26■□□□□ 0.19
NPLOC4-207ENST00000572346 ST13P5Q8NFI4 369 aaPredicted RBP16.26■□□□□ 0.19
NPLOC4-207ENST00000572346 CDK5RAP3Q96JB5 506 aa16.26■□□□□ 0.19
NPLOC4-207ENST00000572346 CHAMP1Q96JM3 812 aa16.26■□□□□ 0.19
NPLOC4-207ENST00000572346 ADPGKQ9BRR6 497 aa16.26■□□□□ 0.19
NPLOC4-207ENST00000572346 SCAND2PQ9GZW5 306 aaPredicted RBP16.26■□□□□ 0.19
NPLOC4-207ENST00000572346 FBXO2Q9UK22 296 aaPredicted RBP16.26■□□□□ 0.19
NPLOC4-207ENST00000572346 NUMBLQ9Y6R0 609 aa16.26■□□□□ 0.19
NPLOC4-207ENST00000572346 TRIP11Q15643 1979 aa16.26■□□□□ 0.19
NPLOC4-207ENST00000572346 ARHGEF35A5YM69 484 aa16.25■□□□□ 0.19
NPLOC4-207ENST00000572346 HNRNPA1P09651 372 aaKnown RBP eCLIP16.25■□□□□ 0.19
NPLOC4-207ENST00000572346 LIG1P18858 919 aa16.25■□□□□ 0.19
NPLOC4-207ENST00000572346 RFX1P22670 979 aa16.25■□□□□ 0.19
NPLOC4-207ENST00000572346 FSHRP23945 695 aa16.25■□□□□ 0.19
NPLOC4-207ENST00000572346 CDC25AP30304 524 aa16.25■□□□□ 0.19
NPLOC4-207ENST00000572346 TXLNAP40222 546 aa16.25■□□□□ 0.19
NPLOC4-207ENST00000572346 NTHL1P78549 312 aa16.25■□□□□ 0.19
NPLOC4-207ENST00000572346 ELAVL2Q12926 359 aaKnown RBP16.25■□□□□ 0.19
NPLOC4-207ENST00000572346 LIN9Q5TKA1 542 aa16.25■□□□□ 0.19
NPLOC4-207ENST00000572346 DEPTORQ8TB45 409 aa16.25■□□□□ 0.19
NPLOC4-207ENST00000572346 CALML4Q96GE6 196 aa16.25■□□□□ 0.19
NPLOC4-207ENST00000572346 CLIC6Q96NY7 704 aa16.25■□□□□ 0.19
NPLOC4-207ENST00000572346 ARHGEF3Q9NR81 526 aa16.25■□□□□ 0.19
NPLOC4-207ENST00000572346 SLC2A4RGQ9NR83 387 aa16.25■□□□□ 0.19
NPLOC4-207ENST00000572346 RCOR1Q9UKL0 485 aa16.25■□□□□ 0.19
NPLOC4-207ENST00000572346 ZFP37Q9Y6Q3 630 aaPredicted RBP16.25■□□□□ 0.19
NPLOC4-207ENST00000572346 MORC2Q9Y6X9 1032 aaPredicted RBP16.25■□□□□ 0.19
NPLOC4-207ENST00000572346 GVINP1Q7Z2Y8 2422 aa16.24■□□□□ 0.19
NPLOC4-207ENST00000572346 DMDP11532 3685 aa16.24■□□□□ 0.19
NPLOC4-207ENST00000572346 PP2D1A8MPX8 630 aa16.24■□□□□ 0.19
NPLOC4-207ENST00000572346 ADAM12O43184 909 aa16.24■□□□□ 0.19
NPLOC4-207ENST00000572346 CUTAO60888 179 aa16.24■□□□□ 0.19
NPLOC4-207ENST00000572346 C8AP07357 584 aa16.24■□□□□ 0.19
NPLOC4-207ENST00000572346 GRIN1Q05586 938 aa16.24■□□□□ 0.19
NPLOC4-207ENST00000572346 PPP2R5AQ15172 486 aa16.24■□□□□ 0.19
NPLOC4-207ENST00000572346 PPM1LQ5SGD2 360 aa16.24■□□□□ 0.19
NPLOC4-207ENST00000572346 PHLDB3Q6NSJ2 640 aa16.24■□□□□ 0.19
NPLOC4-207ENST00000572346 PDXDC1Q6P996 788 aa16.24■□□□□ 0.19
NPLOC4-207ENST00000572346 ADSSL1Q8N142 457 aa16.24■□□□□ 0.19
NPLOC4-207ENST00000572346 FGF14Q92915 247 aa16.24■□□□□ 0.19
NPLOC4-207ENST00000572346 RPP25Q9BUL9 199 aaKnown RBP16.24■□□□□ 0.19
NPLOC4-207ENST00000572346 KIFC3Q9BVG8 833 aa16.24■□□□□ 0.19
NPLOC4-207ENST00000572346 POLD4Q9HCU8 107 aa16.24■□□□□ 0.19
NPLOC4-207ENST00000572346 CDH7Q9ULB5 785 aa16.24■□□□□ 0.19
NPLOC4-207ENST00000572346 GDAQ9Y2T3 454 aa16.24■□□□□ 0.19
NPLOC4-207ENST00000572346 MUTP22033 750 aa16.23■□□□□ 0.19
NPLOC4-207ENST00000572346 HOXA9P31269 272 aa16.23■□□□□ 0.19
NPLOC4-207ENST00000572346 ECM1Q16610 540 aa16.23■□□□□ 0.19
NPLOC4-207ENST00000572346 DCAF4L1Q3SXM0 396 aa16.23■□□□□ 0.19
NPLOC4-207ENST00000572346 SPECC1Q5M775 1068 aa16.23■□□□□ 0.19
NPLOC4-207ENST00000572346 DCLRE1AQ6PJP8 1040 aa16.23■□□□□ 0.19
NPLOC4-207ENST00000572346 PARM1Q6UWI2 310 aa16.23■□□□□ 0.19
NPLOC4-207ENST00000572346 PDZRN4Q6ZMN7 1036 aaPredicted RBP16.23■□□□□ 0.19
NPLOC4-207ENST00000572346 LEO1Q8WVC0 666 aaPredicted RBP16.23■□□□□ 0.19
NPLOC4-207ENST00000572346 CCDC39Q9UFE4 941 aa16.23■□□□□ 0.19
NPLOC4-207ENST00000572346 POLIQ9UNA4 740 aa16.23■□□□□ 0.19
NPLOC4-207ENST00000572346 KIAA1024Q9UPX6 916 aa16.23■□□□□ 0.19
NPLOC4-207ENST00000572346 MYH11P35749 1972 aa16.23■□□□□ 0.19
NPLOC4-207ENST00000572346 TMEM189-UBE2V1I3L0A0 370 aa16.22■□□□□ 0.19
NPLOC4-207ENST00000572346 CCL16O15467 120 aa16.22■□□□□ 0.19
NPLOC4-207ENST00000572346 DCNP07585 359 aaKnown RBP16.22■□□□□ 0.19
NPLOC4-207ENST00000572346 FGFR3P22607 806 aa16.22■□□□□ 0.19
NPLOC4-207ENST00000572346 IGFBP6P24592 240 aaPredicted RBP16.22■□□□□ 0.19
NPLOC4-207ENST00000572346 OR1D2P34982 312 aa16.22■□□□□ 0.19
NPLOC4-207ENST00000572346 EFNA5P52803 228 aa16.22■□□□□ 0.19
NPLOC4-207ENST00000572346 RAB33AQ14088 237 aa16.22■□□□□ 0.19
NPLOC4-207ENST00000572346 GLRA4Q5JXX5 417 aa16.22■□□□□ 0.19
NPLOC4-207ENST00000572346 NT5DC1Q5TFE4 455 aa16.22■□□□□ 0.19
NPLOC4-207ENST00000572346 ATF7IP2Q5U623 682 aa16.22■□□□□ 0.19
NPLOC4-207ENST00000572346 SLC7A14Q8TBB6 771 aa16.22■□□□□ 0.19
NPLOC4-207ENST00000572346 FGF13Q92913 245 aa16.22■□□□□ 0.19
NPLOC4-207ENST00000572346 IFT74Q96LB3 600 aa16.22■□□□□ 0.19
NPLOC4-207ENST00000572346 PPP1R10Q96QC0 940 aaKnown RBP16.22■□□□□ 0.19
NPLOC4-207ENST00000572346 PLIN2Q99541 437 aa16.22■□□□□ 0.19
NPLOC4-207ENST00000572346 BHMT2Q9H2M3 363 aa16.22■□□□□ 0.19
NPLOC4-207ENST00000572346 GDPD2Q9HCC8 539 aa16.22■□□□□ 0.19
NPLOC4-207ENST00000572346 DDX19AQ9NUU7 478 aaKnown RBP16.22■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 18.8 ms