RNA–Protein interactions for RNA: ENST00000571249.1

CHD3-213, Transcript of chromodomain helicase DNA binding protein 3, humanhuman

TSL 3

Gene CHD3, Length 330 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD3-213ENST00000571249 ARMCX6Q7L4S7 300 aa7.83□□□□□ -1.16
CHD3-213ENST00000571249 KRT25Q7Z3Z0 450 aa7.83□□□□□ -1.16
CHD3-213ENST00000571249 HOMER1Q86YM7 354 aa7.83□□□□□ -1.16
CHD3-213ENST00000571249 STAG2Q8N3U4 1231 aa7.83□□□□□ -1.16
CHD3-213ENST00000571249 METTL13Q8N6R0 699 aa7.83□□□□□ -1.16
CHD3-213ENST00000571249 SERBP1Q8NC51 408 aaKnown RBP eCLIP7.83□□□□□ -1.16
CHD3-213ENST00000571249 MTMR8Q96EF0 704 aa7.83□□□□□ -1.16
CHD3-213ENST00000571249 CDHR1Q96JP9 859 aa7.83□□□□□ -1.16
CHD3-213ENST00000571249 GPR62Q9BZJ7 368 aa7.83□□□□□ -1.16
CHD3-213ENST00000571249 JPH1Q9HDC5 661 aaPredicted RBP7.83□□□□□ -1.16
CHD3-213ENST00000571249 PCDHB9Q9Y5E1 797 aa7.83□□□□□ -1.16
CHD3-213ENST00000571249 MUC22E2RYF6 1773 aaPredicted RBP7.83□□□□□ -1.16
CHD3-213ENST00000571249 F8P00451 2351 aa7.83□□□□□ -1.16
CHD3-213ENST00000571249 SPENQ96T58 3664 aaKnown RBP7.82□□□□□ -1.16
CHD3-213ENST00000571249 ATXN2Q99700 1313 aaKnown RBP7.82□□□□□ -1.16
CHD3-213ENST00000571249 MYBPHLA2RUH7 354 aa7.82□□□□□ -1.16
CHD3-213ENST00000571249 ADAM12O43184 909 aa7.82□□□□□ -1.16
CHD3-213ENST00000571249 OPHN1O60890 802 aa7.82□□□□□ -1.16
CHD3-213ENST00000571249 XYLBO75191 536 aa7.82□□□□□ -1.16
CHD3-213ENST00000571249 RHOP08100 348 aa7.82□□□□□ -1.16
CHD3-213ENST00000571249 CTHP32929 405 aa7.82□□□□□ -1.16
CHD3-213ENST00000571249 PTGER3P43115 390 aa7.82□□□□□ -1.16
CHD3-213ENST00000571249 ACTR2P61160 394 aa7.82□□□□□ -1.16
CHD3-213ENST00000571249 MTMR1Q13613 665 aa7.82□□□□□ -1.16
CHD3-213ENST00000571249 ZNF484Q5JVG2 852 aa7.82□□□□□ -1.16
CHD3-213ENST00000571249 ZMYM1Q5SVZ6 1142 aa7.82□□□□□ -1.16
CHD3-213ENST00000571249 LIN9Q5TKA1 542 aa7.82□□□□□ -1.16
CHD3-213ENST00000571249 TSHZ3Q63HK5 1081 aa7.82□□□□□ -1.16
CHD3-213ENST00000571249 PDXDC1Q6P996 788 aa7.82□□□□□ -1.16
CHD3-213ENST00000571249 TMC8Q8IU68 726 aa7.82□□□□□ -1.16
CHD3-213ENST00000571249 CAMKK1Q8N5S9 505 aa7.82□□□□□ -1.16
CHD3-213ENST00000571249 PDCD7Q8N8D1 485 aaKnown RBP7.82□□□□□ -1.16
CHD3-213ENST00000571249 SLC7A14Q8TBB6 771 aa7.82□□□□□ -1.16
CHD3-213ENST00000571249 CSGALNACT1Q8TDX6 532 aa7.82□□□□□ -1.16
CHD3-213ENST00000571249 RSPRY1Q96DX4 576 aa7.82□□□□□ -1.16
CHD3-213ENST00000571249 ASB16Q96NS5 453 aa7.82□□□□□ -1.16
CHD3-213ENST00000571249 FAM193BQ96PV7 902 aaPredicted RBP7.82□□□□□ -1.16
CHD3-213ENST00000571249 TMEM175Q9BSA9 504 aa7.82□□□□□ -1.16
CHD3-213ENST00000571249 SNTG2Q9NY99 539 aa7.82□□□□□ -1.16
CHD3-213ENST00000571249 GTSE1Q9NYZ3 720 aa7.82□□□□□ -1.16
CHD3-213ENST00000571249 SLC9A2Q9UBY0 812 aa7.82□□□□□ -1.16
CHD3-213ENST00000571249 KLRF2D3W0D1 207 aa7.81□□□□□ -1.16
CHD3-213ENST00000571249 TERTO14746 1132 aaKnown RBP7.81□□□□□ -1.16
CHD3-213ENST00000571249 SMARCA5O60264 1052 aaPredicted RBP7.81□□□□□ -1.16
CHD3-213ENST00000571249 ZNF862O60290 1169 aa7.81□□□□□ -1.16
CHD3-213ENST00000571249 C22orf31O95567 290 aa7.81□□□□□ -1.16
CHD3-213ENST00000571249 CFIP05156 583 aa7.81□□□□□ -1.16
CHD3-213ENST00000571249 DARSP14868 501 aaKnown RBP7.81□□□□□ -1.16
CHD3-213ENST00000571249 CR2P20023 1033 aa7.81□□□□□ -1.16
CHD3-213ENST00000571249 CCR2P41597 374 aa7.81□□□□□ -1.16
CHD3-213ENST00000571249 OR1G1P47890 313 aa7.81□□□□□ -1.16
CHD3-213ENST00000571249 SLC26A2P50443 739 aa7.81□□□□□ -1.16
CHD3-213ENST00000571249 CLCN3P51790 818 aa7.81□□□□□ -1.16
CHD3-213ENST00000571249 ATXN3P54252 364 aaPredicted RBP7.81□□□□□ -1.16
CHD3-213ENST00000571249 MLLT6P55198 1093 aaPredicted RBP7.81□□□□□ -1.16
CHD3-213ENST00000571249 HAND2P61296 217 aa7.81□□□□□ -1.16
CHD3-213ENST00000571249 SEMG2Q02383 582 aa7.81□□□□□ -1.16
CHD3-213ENST00000571249 TRAF1Q13077 416 aa7.81□□□□□ -1.16
CHD3-213ENST00000571249 SERINC3Q13530 473 aa7.81□□□□□ -1.16
CHD3-213ENST00000571249 HNRNPDQ14103 355 aaKnown RBP7.81□□□□□ -1.16
CHD3-213ENST00000571249 MAPK6Q16659 721 aa7.81□□□□□ -1.16
CHD3-213ENST00000571249 TSR1Q2NL82 804 aaKnown RBP7.81□□□□□ -1.16
CHD3-213ENST00000571249 TYW1BQ6NUM6 668 aa7.81□□□□□ -1.16
CHD3-213ENST00000571249 USP17L6PQ6QN14 398 aa7.81□□□□□ -1.16
CHD3-213ENST00000571249 ZNF574Q6ZN55 896 aaPredicted RBP7.81□□□□□ -1.16
CHD3-213ENST00000571249 AGMOQ6ZNB7 445 aa7.81□□□□□ -1.16
CHD3-213ENST00000571249 TRMT1LQ7Z2T5 733 aaKnown RBP7.81□□□□□ -1.16
CHD3-213ENST00000571249 FTSJ3Q8IY81 847 aaKnown RBP7.81□□□□□ -1.16
CHD3-213ENST00000571249 SYNPOQ8N3V7 929 aa7.81□□□□□ -1.16
CHD3-213ENST00000571249 MINDY1Q8N5J2 469 aa7.81□□□□□ -1.16
CHD3-213ENST00000571249 FRMD1Q8N878 549 aa7.81□□□□□ -1.16
CHD3-213ENST00000571249 DAGLBQ8NCG7 672 aa7.81□□□□□ -1.16
CHD3-213ENST00000571249 SMARCC2Q8TAQ2 1214 aa7.81□□□□□ -1.16
CHD3-213ENST00000571249 URGCPQ8TCY9 931 aa7.81□□□□□ -1.16
CHD3-213ENST00000571249 WHAMMQ8TF30 809 aa7.81□□□□□ -1.16
CHD3-213ENST00000571249 PTCD2Q8WV60 388 aaKnown RBP7.81□□□□□ -1.16
CHD3-213ENST00000571249 RABGGTAQ92696 567 aa7.81□□□□□ -1.16
CHD3-213ENST00000571249 ZFYVE19Q96K21 471 aa7.81□□□□□ -1.16
CHD3-213ENST00000571249 PIGSQ96S52 555 aa7.81□□□□□ -1.16
CHD3-213ENST00000571249 CLSTN3Q9BQT9 956 aa7.81□□□□□ -1.16
CHD3-213ENST00000571249 TPSD1Q9BZJ3 242 aa7.81□□□□□ -1.16
CHD3-213ENST00000571249 C8orf33Q9H7E9 229 aaPredicted RBP7.81□□□□□ -1.16
CHD3-213ENST00000571249 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP7.81□□□□□ -1.16
CHD3-213ENST00000571249 TOR4AQ9NXH8 423 aa7.81□□□□□ -1.16
CHD3-213ENST00000571249 FNIP2Q9P278 1114 aa7.81□□□□□ -1.16
CHD3-213ENST00000571249 SEPT9Q9UHD8 586 aaPredicted RBP7.81□□□□□ -1.16
CHD3-213ENST00000571249 APOBEC2Q9Y235 224 aaKnown RBP7.81□□□□□ -1.16
CHD3-213ENST00000571249 AKT3Q9Y243 479 aa7.81□□□□□ -1.16
CHD3-213ENST00000571249 COL1A2P08123 1366 aa7.81□□□□□ -1.16
CHD3-213ENST00000571249 SALL3Q9BXA9 1300 aa7.8□□□□□ -1.16
CHD3-213ENST00000571249 TSC2P49815 1807 aa7.8□□□□□ -1.16
CHD3-213ENST00000571249 HEPACAM2A8MVW5 462 aa7.8□□□□□ -1.16
CHD3-213ENST00000571249 PLK4O00444 970 aa7.8□□□□□ -1.16
CHD3-213ENST00000571249 BACH1O14867 736 aa7.8□□□□□ -1.16
CHD3-213ENST00000571249 FGAP02671 866 aa7.8□□□□□ -1.16
CHD3-213ENST00000571249 RLBP1P12271 317 aa7.8□□□□□ -1.16
CHD3-213ENST00000571249 SKIP12755 728 aa7.8□□□□□ -1.16
CHD3-213ENST00000571249 DGKEP52429 567 aa7.8□□□□□ -1.16
CHD3-213ENST00000571249 TLE3Q04726 772 aa7.8□□□□□ -1.16
CHD3-213ENST00000571249 KARSQ15046 597 aaKnown RBP7.8□□□□□ -1.16
Retrieved 100 of 20,778 RNA–protein pairs in 19.5 ms