RNA–Protein interactions for RNA: ENST00000570758.1

CHD3-212, Transcript of chromodomain helicase DNA binding protein 3, humanhuman

TSL 3

Gene CHD3, Length 174 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD3-212ENST00000570758 CLDN3O15551 220 aa5.91□□□□□ -1.46
CHD3-212ENST00000570758 TGM5O43548 720 aa5.91□□□□□ -1.46
CHD3-212ENST00000570758 TRAK2O60296 914 aa5.91□□□□□ -1.46
CHD3-212ENST00000570758 FAM189A1O60320 539 aa5.91□□□□□ -1.46
CHD3-212ENST00000570758 TBCAO75347 108 aaKnown RBP5.91□□□□□ -1.46
CHD3-212ENST00000570758 RFPL2O75678 378 aa5.91□□□□□ -1.46
CHD3-212ENST00000570758 GLUD1P00367 558 aa5.91□□□□□ -1.46
CHD3-212ENST00000570758 PIGRP01833 764 aa5.91□□□□□ -1.46
CHD3-212ENST00000570758 KRT18P05783 430 aaKnown RBP5.91□□□□□ -1.46
CHD3-212ENST00000570758 CLTAP09496 248 aa5.91□□□□□ -1.46
CHD3-212ENST00000570758 CXCL8P10145 99 aa5.91□□□□□ -1.46
CHD3-212ENST00000570758 FGFR3P22607 806 aa5.91□□□□□ -1.46
CHD3-212ENST00000570758 TKTP29401 623 aaKnown RBP5.91□□□□□ -1.46
CHD3-212ENST00000570758 TNFSF9P41273 254 aa5.91□□□□□ -1.46
CHD3-212ENST00000570758 MATR3P43243 847 aaKnown RBP eCLIP5.91□□□□□ -1.46
CHD3-212ENST00000570758 LIG4P49917 911 aa5.91□□□□□ -1.46
CHD3-212ENST00000570758 GUCY2FP51841 1108 aa5.91□□□□□ -1.46
CHD3-212ENST00000570758 ZXDAP98168 799 aa5.91□□□□□ -1.46
CHD3-212ENST00000570758 SPAG1Q07617 926 aa5.91□□□□□ -1.46
CHD3-212ENST00000570758 PKP1Q13835 747 aa5.91□□□□□ -1.46
CHD3-212ENST00000570758 STK38Q15208 465 aa5.91□□□□□ -1.46
CHD3-212ENST00000570758 PSMD5Q16401 504 aa5.91□□□□□ -1.46
CHD3-212ENST00000570758 PTPN21Q16825 1174 aa5.91□□□□□ -1.46
CHD3-212ENST00000570758 FOXD4L6Q3SYB3 417 aaPredicted RBP5.91□□□□□ -1.46
CHD3-212ENST00000570758 ZC2HC1CQ53FD0 456 aaPredicted RBP5.91□□□□□ -1.46
CHD3-212ENST00000570758 ATAT1Q5SQI0 421 aa5.91□□□□□ -1.46
CHD3-212ENST00000570758 RSPO2Q6UXX9 243 aaPredicted RBP5.91□□□□□ -1.46
CHD3-212ENST00000570758 FOXD4L3Q6VB84 417 aaPredicted RBP5.91□□□□□ -1.46
CHD3-212ENST00000570758 PDZRN4Q6ZMN7 1036 aaPredicted RBP5.91□□□□□ -1.46
CHD3-212ENST00000570758 DYMQ7RTS9 669 aa5.91□□□□□ -1.46
CHD3-212ENST00000570758 SFR1Q86XK3 245 aa5.91□□□□□ -1.46
CHD3-212ENST00000570758 GPR65Q8IYL9 337 aa5.91□□□□□ -1.46
CHD3-212ENST00000570758 KRI1Q8N9T8 703 aaKnown RBP5.91□□□□□ -1.46
CHD3-212ENST00000570758 SPRYD3Q8NCJ5 442 aa5.91□□□□□ -1.46
CHD3-212ENST00000570758 KREMEN2Q8NCW0 462 aa5.91□□□□□ -1.46
CHD3-212ENST00000570758 CMASQ8NFW8 434 aaPredicted RBP5.91□□□□□ -1.46
CHD3-212ENST00000570758 DDX12PQ92771 950 aa5.91□□□□□ -1.46
CHD3-212ENST00000570758 EDAQ92838 391 aa5.91□□□□□ -1.46
CHD3-212ENST00000570758 ZNF707Q96C28 371 aaPredicted RBP5.91□□□□□ -1.46
CHD3-212ENST00000570758 DNAJC19Q96DA6 116 aa5.91□□□□□ -1.46
CHD3-212ENST00000570758 BICD1Q96G01 975 aa5.91□□□□□ -1.46
CHD3-212ENST00000570758 DDX27Q96GQ7 796 aaKnown RBP5.91□□□□□ -1.46
CHD3-212ENST00000570758 UROC1Q96N76 676 aa5.91□□□□□ -1.46
CHD3-212ENST00000570758 NECTIN4Q96NY8 510 aa5.91□□□□□ -1.46
CHD3-212ENST00000570758 PANK2Q9BZ23 570 aa5.91□□□□□ -1.46
CHD3-212ENST00000570758 SMOC2Q9H3U7 446 aa5.91□□□□□ -1.46
CHD3-212ENST00000570758 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP5.91□□□□□ -1.46
CHD3-212ENST00000570758 TOPORSQ9NS56 1045 aaPredicted RBP5.91□□□□□ -1.46
CHD3-212ENST00000570758 STK17AQ9UEE5 414 aa5.91□□□□□ -1.46
CHD3-212ENST00000570758 DAXXQ9UER7 740 aaPredicted RBP5.91□□□□□ -1.46
CHD3-212ENST00000570758 CCDC39Q9UFE4 941 aa5.91□□□□□ -1.46
CHD3-212ENST00000570758 TUBGCP4Q9UGJ1 667 aa5.91□□□□□ -1.46
CHD3-212ENST00000570758 FBXW11Q9UKB1 542 aa5.91□□□□□ -1.46
CHD3-212ENST00000570758 VWA8A3KMH1 1905 aa5.91□□□□□ -1.46
CHD3-212ENST00000570758 TRIP11Q15643 1979 aa5.91□□□□□ -1.46
CHD3-212ENST00000570758 DENND4AQ7Z401 1863 aa5.9□□□□□ -1.46
CHD3-212ENST00000570758 C2orf16Q68DN1 1984 aa5.9□□□□□ -1.46
CHD3-212ENST00000570758 A0A0B4J269 797 aa5.9□□□□□ -1.46
CHD3-212ENST00000570758 TTC26A0AVF1 554 aa5.9□□□□□ -1.46
CHD3-212ENST00000570758 TMEM221A6NGB7 291 aa5.9□□□□□ -1.46
CHD3-212ENST00000570758 LACTBL1A8MY62 500 aa5.9□□□□□ -1.46
CHD3-212ENST00000570758 PRR33A8MZF0 331 aa5.9□□□□□ -1.46
CHD3-212ENST00000570758 M0R296 226 aa5.9□□□□□ -1.46
CHD3-212ENST00000570758 SPTLC2O15270 562 aa5.9□□□□□ -1.46
CHD3-212ENST00000570758 OGTO15294 1046 aa5.9□□□□□ -1.46
CHD3-212ENST00000570758 N4BP1O75113 896 aaKnown RBP5.9□□□□□ -1.46
CHD3-212ENST00000570758 ZMYND10O75800 440 aa5.9□□□□□ -1.46
CHD3-212ENST00000570758 PPP1R37O75864 691 aa5.9□□□□□ -1.46
CHD3-212ENST00000570758 PAPLNO95428 1278 aa5.9□□□□□ -1.46
CHD3-212ENST00000570758 YEATS4O95619 227 aa5.9□□□□□ -1.46
CHD3-212ENST00000570758 F13A1P00488 732 aa5.9□□□□□ -1.46
CHD3-212ENST00000570758 ASGR2P07307 311 aa5.9□□□□□ -1.46
CHD3-212ENST00000570758 ZSCAN22P10073 491 aaPredicted RBP5.9□□□□□ -1.46
CHD3-212ENST00000570758 OR1D2P34982 312 aa5.9□□□□□ -1.46
CHD3-212ENST00000570758 TXLNAP40222 546 aa5.9□□□□□ -1.46
CHD3-212ENST00000570758 STAT6P42226 847 aa5.9□□□□□ -1.46
CHD3-212ENST00000570758 CASP5P51878 434 aa5.9□□□□□ -1.46
CHD3-212ENST00000570758 GTF2BQ00403 316 aa5.9□□□□□ -1.46
CHD3-212ENST00000570758 CREMQ03060 361 aa5.9□□□□□ -1.46
CHD3-212ENST00000570758 ELAVL2Q12926 359 aaKnown RBP5.9□□□□□ -1.46
CHD3-212ENST00000570758 ZBTB6Q15916 424 aa5.9□□□□□ -1.46
CHD3-212ENST00000570758 ENOX2Q16206 610 aaKnown RBP5.9□□□□□ -1.46
CHD3-212ENST00000570758 C15orf39Q6ZRI6 1047 aa5.9□□□□□ -1.46
CHD3-212ENST00000570758 CCDC73Q6ZRK6 1079 aa5.9□□□□□ -1.46
CHD3-212ENST00000570758 HFE2Q6ZVN8 426 aa5.9□□□□□ -1.46
CHD3-212ENST00000570758 SV2BQ7L1I2 683 aa5.9□□□□□ -1.46
CHD3-212ENST00000570758 ZNF720Q7Z2F6 126 aa5.9□□□□□ -1.46
CHD3-212ENST00000570758 MAP4K3Q8IVH8 894 aa5.9□□□□□ -1.46
CHD3-212ENST00000570758 ZDHHC14Q8IZN3 488 aa5.9□□□□□ -1.46
CHD3-212ENST00000570758 PDILTQ8N807 584 aa5.9□□□□□ -1.46
CHD3-212ENST00000570758 TDRD5Q8NAT2 981 aaKnown RBP5.9□□□□□ -1.46
CHD3-212ENST00000570758 HDAC7Q8WUI4 952 aa5.9□□□□□ -1.46
CHD3-212ENST00000570758 SMG7Q92540 1137 aaKnown RBP5.9□□□□□ -1.46
CHD3-212ENST00000570758 STAMQ92783 540 aa5.9□□□□□ -1.46
CHD3-212ENST00000570758 KIF12Q96FN5 646 aa5.9□□□□□ -1.46
CHD3-212ENST00000570758 ZNF396Q96N95 335 aaPredicted RBP5.9□□□□□ -1.46
CHD3-212ENST00000570758 STRA6Q9BX79 667 aa5.9□□□□□ -1.46
CHD3-212ENST00000570758 FGFBP2Q9BYJ0 223 aa5.9□□□□□ -1.46
CHD3-212ENST00000570758 PRKD2Q9BZL6 878 aa5.9□□□□□ -1.46
CHD3-212ENST00000570758 ST6GALNAC4Q9H4F1 302 aa5.9□□□□□ -1.46
Retrieved 100 of 20,778 RNA–protein pairs in 24.2 ms