RNA–Protein interactions for RNA: ENST00000570659.5

SMG6-205, Transcript of SMG6, nonsense mediated mRNA decay factor, humanhuman

TSL 4

Gene SMG6, Length 592 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG6-205ENST00000570659 MIER3Q7Z3K6 550 aa8.04□□□□□ -1.12
SMG6-205ENST00000570659 FERMT3Q86UX7 667 aa8.04□□□□□ -1.12
SMG6-205ENST00000570659 SKAP1Q86WV1 359 aa8.04□□□□□ -1.12
SMG6-205ENST00000570659 RASEFQ8IZ41 740 aa8.04□□□□□ -1.12
SMG6-205ENST00000570659 SPEM1Q8N4L4 309 aa8.04□□□□□ -1.12
SMG6-205ENST00000570659 RNF149Q8NC42 400 aa8.04□□□□□ -1.12
SMG6-205ENST00000570659 RIN3Q8TB24 985 aa8.04□□□□□ -1.12
SMG6-205ENST00000570659 EZH1Q92800 747 aaPredicted RBP8.04□□□□□ -1.12
SMG6-205ENST00000570659 DNASE1L2Q92874 299 aa8.04□□□□□ -1.12
SMG6-205ENST00000570659 DDX27Q96GQ7 796 aaKnown RBP8.04□□□□□ -1.12
SMG6-205ENST00000570659 BORCS6Q96GS4 357 aa8.04□□□□□ -1.12
SMG6-205ENST00000570659 CORO1BQ9BR76 489 aa8.04□□□□□ -1.12
SMG6-205ENST00000570659 TTPALQ9BTX7 342 aa8.04□□□□□ -1.12
SMG6-205ENST00000570659 MKNK1Q9BUB5 465 aa8.04□□□□□ -1.12
SMG6-205ENST00000570659 COLEC11Q9BWP8 271 aa8.04□□□□□ -1.12
SMG6-205ENST00000570659 CSRNP2Q9H175 543 aa8.04□□□□□ -1.12
SMG6-205ENST00000570659 FBRSL1Q9HCM7 1045 aaKnown RBP8.04□□□□□ -1.12
SMG6-205ENST00000570659 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP8.04□□□□□ -1.12
SMG6-205ENST00000570659 GTSE1Q9NYZ3 720 aa8.04□□□□□ -1.12
SMG6-205ENST00000570659 RGL1Q9NZL6 768 aa8.04□□□□□ -1.12
SMG6-205ENST00000570659 KCNH3Q9ULD8 1083 aa8.04□□□□□ -1.12
SMG6-205ENST00000570659 INVSQ9Y283 1065 aa8.04□□□□□ -1.12
SMG6-205ENST00000570659 PLXNB3Q9ULL4 1909 aa8.03□□□□□ -1.12
SMG6-205ENST00000570659 LNP1A1A4G5 178 aa8.03□□□□□ -1.12
SMG6-205ENST00000570659 CDX4O14627 284 aaPredicted RBP8.03□□□□□ -1.12
SMG6-205ENST00000570659 TADA2AO75478 443 aa8.03□□□□□ -1.12
SMG6-205ENST00000570659 PAPSS2O95340 614 aaPredicted RBP8.03□□□□□ -1.12
SMG6-205ENST00000570659 C1RP00736 705 aa8.03□□□□□ -1.12
SMG6-205ENST00000570659 PRB1P04280 392 aa8.03□□□□□ -1.12
SMG6-205ENST00000570659 FGFR3P22607 806 aa8.03□□□□□ -1.12
SMG6-205ENST00000570659 PTENP60484 403 aa8.03□□□□□ -1.12
SMG6-205ENST00000570659 SETQ01105 290 aaPredicted RBP8.03□□□□□ -1.12
SMG6-205ENST00000570659 ROR1Q01973 937 aa8.03□□□□□ -1.12
SMG6-205ENST00000570659 CCINQ13939 588 aa8.03□□□□□ -1.12
SMG6-205ENST00000570659 EMC2Q15006 297 aa8.03□□□□□ -1.12
SMG6-205ENST00000570659 PON2Q15165 354 aa8.03□□□□□ -1.12
SMG6-205ENST00000570659 NECTIN1Q15223 517 aa8.03□□□□□ -1.12
SMG6-205ENST00000570659 TEAD2Q15562 447 aa8.03□□□□□ -1.12
SMG6-205ENST00000570659 GLRA4Q5JXX5 417 aa8.03□□□□□ -1.12
SMG6-205ENST00000570659 EEF1DP3Q658K8 133 aa8.03□□□□□ -1.12
SMG6-205ENST00000570659 CREB3L3Q68CJ9 461 aa8.03□□□□□ -1.12
SMG6-205ENST00000570659 CASC1Q6TDU7 716 aa8.03□□□□□ -1.12
SMG6-205ENST00000570659 CEP68Q76N32 757 aa8.03□□□□□ -1.12
SMG6-205ENST00000570659 SRGAP1Q7Z6B7 1085 aa8.03□□□□□ -1.12
SMG6-205ENST00000570659 WDR5BQ86VZ2 330 aa8.03□□□□□ -1.12
SMG6-205ENST00000570659 REXO1Q8N1G1 1221 aaKnown RBP8.03□□□□□ -1.12
SMG6-205ENST00000570659 TMEM87BQ96K49 555 aa8.03□□□□□ -1.12
SMG6-205ENST00000570659 RIT2Q99578 217 aa8.03□□□□□ -1.12
SMG6-205ENST00000570659 TRMT61BQ9BVS5 477 aaKnown RBP8.03□□□□□ -1.12
SMG6-205ENST00000570659 TEKT3Q9BXF9 490 aa8.03□□□□□ -1.12
SMG6-205ENST00000570659 LRRC3Q9BY71 257 aa8.03□□□□□ -1.12
SMG6-205ENST00000570659 DUSP15Q9H1R2 295 aaPredicted RBP8.03□□□□□ -1.12
SMG6-205ENST00000570659 CRISPLD1Q9H336 500 aa8.03□□□□□ -1.12
SMG6-205ENST00000570659 FSCN3Q9NQT6 498 aa8.03□□□□□ -1.12
SMG6-205ENST00000570659 VPS54Q9P1Q0 977 aa8.03□□□□□ -1.12
SMG6-205ENST00000570659 MTRRQ9UBK8 725 aa8.03□□□□□ -1.12
SMG6-205ENST00000570659 ZBTB47Q9UFB7 747 aaPredicted RBP8.03□□□□□ -1.12
SMG6-205ENST00000570659 SSX2IPQ9Y2D8 614 aa8.03□□□□□ -1.12
SMG6-205ENST00000570659 PTPRDP23468 1912 aa8.03□□□□□ -1.12
SMG6-205ENST00000570659 ADAMTS9Q9P2N4 1935 aa8.03□□□□□ -1.12
SMG6-205ENST00000570659 TNRC6BQ9UPQ9 1833 aaKnown RBP8.02□□□□□ -1.13
SMG6-205ENST00000570659 SPAARA0A1B0GVQ0 90 aa8.02□□□□□ -1.13
SMG6-205ENST00000570659 ESYT2A0FGR8 921 aa8.02□□□□□ -1.13
SMG6-205ENST00000570659 GOLGA8AA7E2F4 631 aa8.02□□□□□ -1.13
SMG6-205ENST00000570659 GOLGA8BA8MQT2 603 aa8.02□□□□□ -1.13
SMG6-205ENST00000570659 HEPACAM2A8MVW5 462 aa8.02□□□□□ -1.13
SMG6-205ENST00000570659 NCAM2O15394 837 aa8.02□□□□□ -1.13
SMG6-205ENST00000570659 PRKCBP05771 671 aa8.02□□□□□ -1.13
SMG6-205ENST00000570659 POU2F2P09086 479 aa8.02□□□□□ -1.13
SMG6-205ENST00000570659 U2AF2P26368 475 aaKnown RBP eCLIP8.02□□□□□ -1.132e-8■■■□□ 17.8
SMG6-205ENST00000570659 JAK3P52333 1124 aa8.02□□□□□ -1.13
SMG6-205ENST00000570659 NRLP54845 237 aa8.02□□□□□ -1.13
SMG6-205ENST00000570659 CACNB1Q02641 598 aaPredicted RBP8.02□□□□□ -1.13
SMG6-205ENST00000570659 GRIK3Q13003 919 aa8.02□□□□□ -1.13
SMG6-205ENST00000570659 TUSC3Q13454 348 aa8.02□□□□□ -1.13
SMG6-205ENST00000570659 PLK5Q496M5 336 aa8.02□□□□□ -1.13
SMG6-205ENST00000570659 RNF43Q68DV7 783 aa8.02□□□□□ -1.13
SMG6-205ENST00000570659 GPR65Q8IYL9 337 aa8.02□□□□□ -1.13
SMG6-205ENST00000570659 C12orf50Q8NA57 414 aaPredicted RBP8.02□□□□□ -1.13
SMG6-205ENST00000570659 DEFB124Q8NES8 71 aa8.02□□□□□ -1.13
SMG6-205ENST00000570659 SHKBP1Q8TBC3 707 aa8.02□□□□□ -1.13
SMG6-205ENST00000570659 GAB3Q8WWW8 586 aa8.02□□□□□ -1.13
SMG6-205ENST00000570659 RSPH1Q8WYR4 309 aa8.02□□□□□ -1.13
SMG6-205ENST00000570659 AIFM3Q96NN9 605 aa8.02□□□□□ -1.13
SMG6-205ENST00000570659 EDEM2Q9BV94 578 aa8.02□□□□□ -1.13
SMG6-205ENST00000570659 GPRC5CQ9NQ84 441 aa8.02□□□□□ -1.13
SMG6-205ENST00000570659 GDE1Q9NZC3 331 aa8.02□□□□□ -1.13
SMG6-205ENST00000570659 PARP2Q9UGN5 583 aa8.02□□□□□ -1.13
SMG6-205ENST00000570659 DPP7Q9UHL4 492 aa8.02□□□□□ -1.13
SMG6-205ENST00000570659 MRPS17Q9Y2R5 130 aaKnown RBP8.02□□□□□ -1.13
SMG6-205ENST00000570659 GIT1Q9Y2X7 761 aa8.02□□□□□ -1.13
SMG6-205ENST00000570659 GPSM3Q9Y4H4 160 aa8.02□□□□□ -1.13
SMG6-205ENST00000570659 SF3B1O75533 1304 aaKnown RBP eCLIP8.02□□□□□ -1.13
SMG6-205ENST00000570659 KLF18A0A0U1RQI7 1052 aa8.01□□□□□ -1.13
SMG6-205ENST00000570659 ARHGEF37A1IGU5 675 aa8.01□□□□□ -1.13
SMG6-205ENST00000570659 FAM205CA6NFA0 338 aa8.01□□□□□ -1.13
SMG6-205ENST00000570659 PCNX2A6NKB5 2137 aa8.01□□□□□ -1.13
SMG6-205ENST00000570659 SPECC1L-ADORA2AF8WAN1 911 aa8.01□□□□□ -1.13
SMG6-205ENST00000570659 M0R2N6 131 aa8.01□□□□□ -1.13
SMG6-205ENST00000570659 MAN2B1O00754 1011 aa8.01□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 21.9 ms