RNA–Protein interactions for RNA: ENST00000570606.5

SMG6-204, Transcript of SMG6, nonsense mediated mRNA decay factor, humanhuman

TSL 4

Gene SMG6, Length 572 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG6-204ENST00000570606 TMEM175Q9BSA9 504 aa7.23□□□□□ -1.25
SMG6-204ENST00000570606 PHF20Q9BVI0 1012 aa7.23□□□□□ -1.25
SMG6-204ENST00000570606 VN1R3Q9BXE9 311 aa7.23□□□□□ -1.25
SMG6-204ENST00000570606 TRIM6Q9C030 488 aaPredicted RBP7.23□□□□□ -1.25
SMG6-204ENST00000570606 SMOC2Q9H3U7 446 aa7.23□□□□□ -1.25
SMG6-204ENST00000570606 MINDY3Q9H8M7 445 aa7.23□□□□□ -1.25
SMG6-204ENST00000570606 IFT122Q9HBG6 1241 aa7.23□□□□□ -1.25
SMG6-204ENST00000570606 BRMS1Q9HCU9 246 aa7.23□□□□□ -1.25
SMG6-204ENST00000570606 KCNMB3Q9NPA1 279 aa7.23□□□□□ -1.25
SMG6-204ENST00000570606 MAN1C1Q9NR34 630 aa7.23□□□□□ -1.25
SMG6-204ENST00000570606 MRPL17Q9NRX2 175 aaKnown RBP7.23□□□□□ -1.25
SMG6-204ENST00000570606 FBXL21Q9UKT6 434 aa7.23□□□□□ -1.25
SMG6-204ENST00000570606 FAN1Q9Y2M0 1017 aa7.23□□□□□ -1.25
SMG6-204ENST00000570606 PRG3Q9Y2Y8 225 aaPredicted RBP7.23□□□□□ -1.25
SMG6-204ENST00000570606 IRAK3Q9Y616 596 aa7.23□□□□□ -1.25
SMG6-204ENST00000570606 STK36Q9NRP7 1315 aa7.23□□□□□ -1.25
SMG6-204ENST00000570606 H0Y858 1186 aa7.22□□□□□ -1.25
SMG6-204ENST00000570606 INO80B-WBP1J3KQ70 363 aa7.22□□□□□ -1.25
SMG6-204ENST00000570606 MEN1O00255 615 aa7.22□□□□□ -1.25
SMG6-204ENST00000570606 TBX3O15119 743 aa7.22□□□□□ -1.25
SMG6-204ENST00000570606 EPB41L2O43491 1005 aaKnown RBP7.22□□□□□ -1.25
SMG6-204ENST00000570606 DDHD2O94830 711 aa7.22□□□□□ -1.25
SMG6-204ENST00000570606 BAG4O95429 457 aaKnown RBP7.22□□□□□ -1.25
SMG6-204ENST00000570606 POMCP01189 267 aa7.22□□□□□ -1.25
SMG6-204ENST00000570606 SOD2P04179 222 aa7.22□□□□□ -1.25
SMG6-204ENST00000570606 ITGA4P13612 1032 aa7.22□□□□□ -1.25
SMG6-204ENST00000570606 MLH1P40692 756 aa7.22□□□□□ -1.25
SMG6-204ENST00000570606 OR1G1P47890 313 aa7.22□□□□□ -1.25
SMG6-204ENST00000570606 CLCN4P51793 760 aa7.22□□□□□ -1.25
SMG6-204ENST00000570606 NCBP1Q09161 790 aaKnown RBP7.22□□□□□ -1.25
SMG6-204ENST00000570606 SCRN1Q12765 414 aa7.22□□□□□ -1.25
SMG6-204ENST00000570606 TFDP1Q14186 410 aa7.22□□□□□ -1.25
SMG6-204ENST00000570606 CTTNQ14247 550 aaKnown RBP7.22□□□□□ -1.25
SMG6-204ENST00000570606 EPHA7Q15375 998 aa7.22□□□□□ -1.25
SMG6-204ENST00000570606 TEAD4Q15561 434 aa7.22□□□□□ -1.25
SMG6-204ENST00000570606 PPP4R3AQ6IN85 833 aa7.22□□□□□ -1.25
SMG6-204ENST00000570606 C16orf46Q6P387 395 aa7.22□□□□□ -1.25
SMG6-204ENST00000570606 NOTUMQ6P988 496 aa7.22□□□□□ -1.25
SMG6-204ENST00000570606 OTUD6AQ7L8S5 288 aa7.22□□□□□ -1.25
SMG6-204ENST00000570606 GPR149Q86SP6 731 aa7.22□□□□□ -1.25
SMG6-204ENST00000570606 FERMT3Q86UX7 667 aa7.22□□□□□ -1.25
SMG6-204ENST00000570606 C4orf19Q8IY42 314 aa7.22□□□□□ -1.25
SMG6-204ENST00000570606 SLFN12Q8IYM2 578 aa7.22□□□□□ -1.25
SMG6-204ENST00000570606 HACE1Q8IYU2 909 aa7.22□□□□□ -1.25
SMG6-204ENST00000570606 CNNM3Q8NE01 707 aa7.22□□□□□ -1.25
SMG6-204ENST00000570606 SLC22A17Q8WUG5 538 aa7.22□□□□□ -1.25
SMG6-204ENST00000570606 PRPF31Q8WWY3 499 aaKnown RBP7.22□□□□□ -1.25
SMG6-204ENST00000570606 WASF1Q92558 559 aa7.22□□□□□ -1.25
SMG6-204ENST00000570606 CCDC51Q96ER9 411 aa7.22□□□□□ -1.25
SMG6-204ENST00000570606 DYDC2Q96IM9 177 aa7.22□□□□□ -1.25
SMG6-204ENST00000570606 CPB2Q96IY4 423 aa7.22□□□□□ -1.25
SMG6-204ENST00000570606 KLHL5Q96PQ7 755 aa7.22□□□□□ -1.25
SMG6-204ENST00000570606 HERC2P3Q9BVR0 1158 aa7.22□□□□□ -1.25
SMG6-204ENST00000570606 APOL6Q9BWW8 343 aa7.22□□□□□ -1.25
SMG6-204ENST00000570606 TM6SF1Q9BZW5 370 aa7.22□□□□□ -1.25
SMG6-204ENST00000570606 DHX33Q9H6R0 707 aaKnown RBP7.22□□□□□ -1.25
SMG6-204ENST00000570606 ZSWIM4Q9H7M6 989 aa7.22□□□□□ -1.25
SMG6-204ENST00000570606 ZNF395Q9H8N7 513 aaPredicted RBP7.22□□□□□ -1.25
SMG6-204ENST00000570606 UBN1Q9NPG3 1134 aa7.22□□□□□ -1.25
SMG6-204ENST00000570606 RGL1Q9NZL6 768 aa7.22□□□□□ -1.25
SMG6-204ENST00000570606 KANSL3Q9P2N6 904 aa7.22□□□□□ -1.25
SMG6-204ENST00000570606 WRAP73Q9P2S5 460 aaPredicted RBP7.22□□□□□ -1.25
SMG6-204ENST00000570606 EP300Q09472 2414 aaPredicted RBP7.22□□□□□ -1.25
SMG6-204ENST00000570606 VPS13AQ96RL7 3174 aa7.22□□□□□ -1.25
SMG6-204ENST00000570606 DOCK6Q96HP0 2047 aa7.22□□□□□ -1.25
SMG6-204ENST00000570606 NRP1O14786 923 aa7.21□□□□□ -1.26
SMG6-204ENST00000570606 ASAP2O43150 1006 aa7.21□□□□□ -1.26
SMG6-204ENST00000570606 TSPAN1O60635 241 aa7.21□□□□□ -1.26
SMG6-204ENST00000570606 GLUD1P00367 558 aa7.21□□□□□ -1.26
SMG6-204ENST00000570606 ALDH2P05091 517 aa7.21□□□□□ -1.26
SMG6-204ENST00000570606 CNPP09543 421 aaKnown RBP7.21□□□□□ -1.26
SMG6-204ENST00000570606 NCLP19338 710 aaKnown RBP7.21□□□□□ -1.26
SMG6-204ENST00000570606 AXLP30530 894 aa7.21□□□□□ -1.26
SMG6-204ENST00000570606 GBP2P32456 591 aaPredicted RBP7.21□□□□□ -1.26
SMG6-204ENST00000570606 KRT2P35908 639 aa7.21□□□□□ -1.26
SMG6-204ENST00000570606 GLUD2P49448 558 aa7.21□□□□□ -1.26
SMG6-204ENST00000570606 SCNN1GP51170 649 aa7.21□□□□□ -1.26
SMG6-204ENST00000570606 AFF1P51825 1210 aaKnown RBP7.21□□□□□ -1.26
SMG6-204ENST00000570606 MXD4Q14582 209 aaPredicted RBP7.21□□□□□ -1.26
SMG6-204ENST00000570606 PCBP1Q15365 356 aaKnown RBP eCLIP7.21□□□□□ -1.26
SMG6-204ENST00000570606 CALCRLQ16602 461 aa7.21□□□□□ -1.26
SMG6-204ENST00000570606 COX20Q5RI15 118 aa7.21□□□□□ -1.26
SMG6-204ENST00000570606 UBXN11Q5T124 520 aa7.21□□□□□ -1.26
SMG6-204ENST00000570606 SH3PXD2AQ5TCZ1 1133 aa7.21□□□□□ -1.26
SMG6-204ENST00000570606 C15orf39Q6ZRI6 1047 aa7.21□□□□□ -1.26
SMG6-204ENST00000570606 MRPL10Q7Z7H8 261 aaKnown RBP7.21□□□□□ -1.26
SMG6-204ENST00000570606 TPH2Q8IWU9 490 aa7.21□□□□□ -1.26
SMG6-204ENST00000570606 TMEM105Q8N8V8 129 aa7.21□□□□□ -1.26
SMG6-204ENST00000570606 FEZF2Q8TBJ5 459 aa7.21□□□□□ -1.26
SMG6-204ENST00000570606 HAS1Q92839 578 aa7.21□□□□□ -1.26
SMG6-204ENST00000570606 MYO19Q96H55 970 aa7.21□□□□□ -1.26
SMG6-204ENST00000570606 RPS6KC1Q96S38 1066 aa7.21□□□□□ -1.26
SMG6-204ENST00000570606 GAD1Q99259 594 aa7.21□□□□□ -1.26
SMG6-204ENST00000570606 EIF2AQ9BY44 585 aaKnown RBP7.21□□□□□ -1.26
SMG6-204ENST00000570606 UTP3Q9NQZ2 479 aaKnown RBP eCLIP7.21□□□□□ -1.26
SMG6-204ENST00000570606 GJB4Q9NTQ9 266 aa7.21□□□□□ -1.26
SMG6-204ENST00000570606 MARCH5Q9NX47 278 aa7.21□□□□□ -1.26
SMG6-204ENST00000570606 ORC3Q9UBD5 711 aaPredicted RBP7.21□□□□□ -1.26
SMG6-204ENST00000570606 DPP7Q9UHL4 492 aa7.21□□□□□ -1.26
SMG6-204ENST00000570606 SSX2IPQ9Y2D8 614 aa7.21□□□□□ -1.26
Retrieved 100 of 20,778 RNA–protein pairs in 83.1 ms