RNA–Protein interactions for RNA: ENST00000569971.5

UBR1-211, Transcript of ubiquitin protein ligase E3 component n-recognin 1, humanhuman

TSL 4

Gene UBR1, Length 721 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR1-211ENST00000569971 IFNL2Q8IZJ0 200 aa4.55□□□□□ -1.68
UBR1-211ENST00000569971 KRT78Q8N1N4 520 aa4.55□□□□□ -1.68
UBR1-211ENST00000569971 SH2D3CQ8N5H7 860 aa4.55□□□□□ -1.68
UBR1-211ENST00000569971 ENAHQ8N8S7 591 aaPredicted RBP4.55□□□□□ -1.68
UBR1-211ENST00000569971 C3orf20Q8ND61 904 aa4.55□□□□□ -1.68
UBR1-211ENST00000569971 SNX33Q8WV41 574 aa4.55□□□□□ -1.68
UBR1-211ENST00000569971 NKD2Q969F2 451 aaPredicted RBP4.55□□□□□ -1.68
UBR1-211ENST00000569971 PGBD4Q96DM1 585 aa4.55□□□□□ -1.68
UBR1-211ENST00000569971 VRK1Q99986 396 aaPredicted RBP4.55□□□□□ -1.68
UBR1-211ENST00000569971 NUP62CLQ9H1M0 184 aa4.55□□□□□ -1.68
UBR1-211ENST00000569971 LDAHQ9H6V9 325 aa4.55□□□□□ -1.68
UBR1-211ENST00000569971 C14orf93Q9H972 538 aaKnown RBP4.55□□□□□ -1.68
UBR1-211ENST00000569971 ZMAT3Q9HA38 289 aaKnown RBP4.55□□□□□ -1.68
UBR1-211ENST00000569971 ATP6V0A4Q9HBG4 840 aa4.55□□□□□ -1.68
UBR1-211ENST00000569971 LMBRD1Q9NUN5 540 aa4.55□□□□□ -1.68
UBR1-211ENST00000569971 TDP1Q9NUW8 608 aa4.55□□□□□ -1.68
UBR1-211ENST00000569971 STAP2Q9UGK3 403 aa4.55□□□□□ -1.68
UBR1-211ENST00000569971 DUSP10Q9Y6W6 482 aa4.55□□□□□ -1.68
UBR1-211ENST00000569971 UGGT2Q9NYU1 1516 aa4.55□□□□□ -1.68
UBR1-211ENST00000569971 ERCC6Q03468 1493 aa4.55□□□□□ -1.68
UBR1-211ENST00000569971 LRRIQ1Q96JM4 1722 aa4.55□□□□□ -1.68
UBR1-211ENST00000569971 PTPN23Q9H3S7 1636 aa4.54□□□□□ -1.68
UBR1-211ENST00000569971 A0A1B0GTL3 188 aa4.54□□□□□ -1.68
UBR1-211ENST00000569971 ABHD14A-ACY1A0A1B0GW23 586 aa4.54□□□□□ -1.68
UBR1-211ENST00000569971 SUV39H1O43463 412 aa4.54□□□□□ -1.68
UBR1-211ENST00000569971 SGTAO43765 313 aa4.54□□□□□ -1.68
UBR1-211ENST00000569971 TCEA3O75764 348 aa4.54□□□□□ -1.68
UBR1-211ENST00000569971 COL6A1P12109 1028 aa4.54□□□□□ -1.68
UBR1-211ENST00000569971 MYF5P13349 255 aa4.54□□□□□ -1.68
UBR1-211ENST00000569971 ECHS1P30084 290 aa4.54□□□□□ -1.68
UBR1-211ENST00000569971 TM4SF4P48230 202 aa4.54□□□□□ -1.68
UBR1-211ENST00000569971 PRIM2P49643 509 aa4.54□□□□□ -1.68
UBR1-211ENST00000569971 RAB1AP62820 205 aa4.54□□□□□ -1.68
UBR1-211ENST00000569971 NKX6-1P78426 367 aaPredicted RBP4.54□□□□□ -1.68
UBR1-211ENST00000569971 CDC42EP1Q00587 391 aa4.54□□□□□ -1.68
UBR1-211ENST00000569971 MEF2AQ02078 507 aaPredicted RBP4.54□□□□□ -1.68
UBR1-211ENST00000569971 STK3Q13188 491 aa4.54□□□□□ -1.68
UBR1-211ENST00000569971 FGL2Q14314 439 aa4.54□□□□□ -1.68
UBR1-211ENST00000569971 PLS1Q14651 629 aa4.54□□□□□ -1.68
UBR1-211ENST00000569971 EIF4HQ15056 248 aaKnown RBP4.54□□□□□ -1.68
UBR1-211ENST00000569971 SURF1Q15526 300 aa4.54□□□□□ -1.68
UBR1-211ENST00000569971 C4orf46Q504U0 113 aa4.54□□□□□ -1.68
UBR1-211ENST00000569971 C19orf54Q5BKX5 351 aa4.54□□□□□ -1.68
UBR1-211ENST00000569971 TAS1R1Q7RTX1 841 aa4.54□□□□□ -1.68
UBR1-211ENST00000569971 PLEKHH3Q7Z736 793 aa4.54□□□□□ -1.68
UBR1-211ENST00000569971 RSPH3Q86UC2 560 aa4.54□□□□□ -1.68
UBR1-211ENST00000569971 ADGRG2Q8IZP9 1017 aa4.54□□□□□ -1.68
UBR1-211ENST00000569971 PQLC1Q8N2U9 271 aa4.54□□□□□ -1.68
UBR1-211ENST00000569971 MSL3Q8N5Y2 521 aaKnown RBP4.54□□□□□ -1.68
UBR1-211ENST00000569971 CCHCR1Q8TD31 782 aa4.54□□□□□ -1.68
UBR1-211ENST00000569971 LCORQ96JN0 433 aaPredicted RBP4.54□□□□□ -1.68
UBR1-211ENST00000569971 MRGPRX4Q96LA9 322 aa4.54□□□□□ -1.68
UBR1-211ENST00000569971 SGCZQ96LD1 299 aa4.54□□□□□ -1.68
UBR1-211ENST00000569971 RIPOR3Q96MK2 946 aa4.54□□□□□ -1.68
UBR1-211ENST00000569971 YTHDC1Q96MU7 727 aaKnown RBP4.54□□□□□ -1.68
UBR1-211ENST00000569971 UIMC1Q96RL1 719 aa4.54□□□□□ -1.68
UBR1-211ENST00000569971 PDCD2LQ9BRP1 358 aa4.54□□□□□ -1.68
UBR1-211ENST00000569971 C22orf23Q9BZE7 217 aa4.54□□□□□ -1.68
UBR1-211ENST00000569971 KIAA0586Q9BVV6 1533 aa4.54□□□□□ -1.68
UBR1-211ENST00000569971 HFM1A2PYH4 1435 aa4.54□□□□□ -1.68
UBR1-211ENST00000569971 UACAQ9BZF9 1416 aa4.54□□□□□ -1.68
UBR1-211ENST00000569971 EIF4G3O43432 1585 aaKnown RBP4.53□□□□□ -1.68
UBR1-211ENST00000569971 USP19O94966 1318 aa4.53□□□□□ -1.68
UBR1-211ENST00000569971 ARHGEF11O15085 1522 aa4.53□□□□□ -1.68
UBR1-211ENST00000569971 EPRSP07814 1512 aaKnown RBP4.53□□□□□ -1.68
UBR1-211ENST00000569971 RHPN2P1A8MT19 583 aa4.53□□□□□ -1.68
UBR1-211ENST00000569971 RASA4BC9J798 803 aa4.53□□□□□ -1.68
UBR1-211ENST00000569971 F5H423 210 aaPredicted RBP4.53□□□□□ -1.68
UBR1-211ENST00000569971 KPNA5O15131 536 aa4.53□□□□□ -1.68
UBR1-211ENST00000569971 DAPK3O43293 454 aa4.53□□□□□ -1.68
UBR1-211ENST00000569971 RASA4O43374 803 aa4.53□□□□□ -1.68
UBR1-211ENST00000569971 PHF2O75151 1096 aa4.53□□□□□ -1.68
UBR1-211ENST00000569971 ENDOD1O94919 500 aa4.53□□□□□ -1.68
UBR1-211ENST00000569971 AMY1AP04745 511 aa4.53□□□□□ -1.68
UBR1-211ENST00000569971 CHGBP05060 677 aa4.53□□□□□ -1.68
UBR1-211ENST00000569971 ZNF20P17024 532 aa4.53□□□□□ -1.68
UBR1-211ENST00000569971 IL13P35225 146 aa4.53□□□□□ -1.68
UBR1-211ENST00000569971 PER3P56645 1201 aa4.53□□□□□ -1.68
UBR1-211ENST00000569971 SNAPC2Q13487 334 aa4.53□□□□□ -1.68
UBR1-211ENST00000569971 POLD3Q15054 466 aaPredicted RBP4.53□□□□□ -1.68
UBR1-211ENST00000569971 MST1LQ2TV78 715 aa4.53□□□□□ -1.68
UBR1-211ENST00000569971 INO80DQ53TQ3 878 aaPredicted RBP4.53□□□□□ -1.68
UBR1-211ENST00000569971 TRMT10BQ6PF06 316 aaKnown RBP4.53□□□□□ -1.68
UBR1-211ENST00000569971 LARP4Q71RC2 724 aaKnown RBP eCLIP4.53□□□□□ -1.68
UBR1-211ENST00000569971 UNC5BQ8IZJ1 945 aa4.53□□□□□ -1.68
UBR1-211ENST00000569971 LGI4Q8N135 537 aa4.53□□□□□ -1.68
UBR1-211ENST00000569971 ZGPATQ8N5A5 531 aaKnown RBP4.53□□□□□ -1.68
UBR1-211ENST00000569971 ADAMTS17Q8TE56 1095 aa4.53□□□□□ -1.68
UBR1-211ENST00000569971 STON2Q8WXE9 905 aa4.53□□□□□ -1.68
UBR1-211ENST00000569971 DVL3Q92997 716 aaPredicted RBP4.53□□□□□ -1.68
UBR1-211ENST00000569971 PHKBQ93100 1093 aa4.53□□□□□ -1.68
UBR1-211ENST00000569971 SLC35A4Q96G79 324 aa4.53□□□□□ -1.68
UBR1-211ENST00000569971 APIPQ96GX9 242 aa4.53□□□□□ -1.68
UBR1-211ENST00000569971 TMX3Q96JJ7 454 aa4.53□□□□□ -1.68
UBR1-211ENST00000569971 PTPN18Q99952 460 aa4.53□□□□□ -1.68
UBR1-211ENST00000569971 TMEM168Q9H0V1 697 aa4.53□□□□□ -1.68
UBR1-211ENST00000569971 MANSC1Q9H8J5 431 aa4.53□□□□□ -1.68
UBR1-211ENST00000569971 BARX1Q9HBU1 254 aaPredicted RBP4.53□□□□□ -1.68
UBR1-211ENST00000569971 TLR9Q9NR96 1032 aa4.53□□□□□ -1.68
UBR1-211ENST00000569971 PNPOQ9NVS9 261 aa4.53□□□□□ -1.68
Retrieved 100 of 20,778 RNA–protein pairs in 26.7 ms