RNA–Protein interactions for RNA: ENST00000569422.1

LINC00558-201, long intergenic non-protein coding RNA 558, humanhuman

TSL 1 (best) BASIC

Gene LINC00558, Length 3,163 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00558-201ENST00000569422 RRM1P23921 792 aa9.37□□□□□ -0.91
LINC00558-201ENST00000569422 RPL21P46778 160 aaKnown RBP9.37□□□□□ -0.91
LINC00558-201ENST00000569422 POU5F1Q01860 360 aaKnown RBP9.37□□□□□ -0.91
LINC00558-201ENST00000569422 WDR44Q5JSH3 913 aa9.37□□□□□ -0.91
LINC00558-201ENST00000569422 TAS1R3Q7RTX0 852 aa9.37□□□□□ -0.91
LINC00558-201ENST00000569422 CDR2LQ86X02 465 aaPredicted RBP9.37□□□□□ -0.91
LINC00558-201ENST00000569422 CYFIP2Q96F07 1278 aa9.37□□□□□ -0.91
LINC00558-201ENST00000569422 SELENOSQ9BQE4 189 aa9.37□□□□□ -0.91
LINC00558-201ENST00000569422 C11orf70Q9BRQ4 267 aa9.37□□□□□ -0.91
LINC00558-201ENST00000569422 AS3MTQ9HBK9 375 aa9.37□□□□□ -0.91
LINC00558-201ENST00000569422 KLHL11Q9NVR0 708 aa9.37□□□□□ -0.91
LINC00558-201ENST00000569422 H0YGN5 161 aa9.36□□□□□ -0.91
LINC00558-201ENST00000569422 K7ERI5 159 aa9.36□□□□□ -0.91
LINC00558-201ENST00000569422 CAND2O75155 1236 aa9.36□□□□□ -0.91
LINC00558-201ENST00000569422 DGAT1O75907 488 aa9.36□□□□□ -0.91
LINC00558-201ENST00000569422 RARAP10276 462 aa9.36□□□□□ -0.91
LINC00558-201ENST00000569422 DSG3P32926 999 aa9.36□□□□□ -0.91
LINC00558-201ENST00000569422 MDH1P40925 334 aaKnown RBP9.36□□□□□ -0.91
LINC00558-201ENST00000569422 OSTNP61366 133 aa9.36□□□□□ -0.91
LINC00558-201ENST00000569422 CDR2Q01850 454 aa9.36□□□□□ -0.91
LINC00558-201ENST00000569422 SLC29A2Q14542 456 aa9.36□□□□□ -0.91
LINC00558-201ENST00000569422 TMEM270Q6UE05 265 aa9.36□□□□□ -0.91
LINC00558-201ENST00000569422 KDM7AQ6ZMT4 941 aa9.36□□□□□ -0.91
LINC00558-201ENST00000569422 C12orf56Q8IXR9 622 aa9.36□□□□□ -0.91
LINC00558-201ENST00000569422 TTC30BQ8N4P2 665 aa9.36□□□□□ -0.91
LINC00558-201ENST00000569422 DEPTORQ8TB45 409 aa9.36□□□□□ -0.91
LINC00558-201ENST00000569422 SEMA4AQ9H3S1 761 aa9.36□□□□□ -0.91
LINC00558-201ENST00000569422 ACAD9Q9H845 621 aa9.36□□□□□ -0.91
LINC00558-201ENST00000569422 RASAL2Q9UJF2 1139 aa9.36□□□□□ -0.91
LINC00558-201ENST00000569422 NFS1Q9Y697 457 aa9.36□□□□□ -0.91
LINC00558-201ENST00000569422 SYNGAP1Q96PV0 1343 aa9.36□□□□□ -0.91
LINC00558-201ENST00000569422 O00370 1275 aa9.36□□□□□ -0.91
LINC00558-201ENST00000569422 CD58P19256 250 aa9.36□□□□□ -0.91
LINC00558-201ENST00000569422 CD151P48509 253 aa9.36□□□□□ -0.91
LINC00558-201ENST00000569422 SKOR1P84550 965 aa9.36□□□□□ -0.91
LINC00558-201ENST00000569422 EMC2Q15006 297 aa9.36□□□□□ -0.91
LINC00558-201ENST00000569422 GNPTABQ3T906 1256 aa9.36□□□□□ -0.91
LINC00558-201ENST00000569422 CCDC38Q502W7 563 aa9.36□□□□□ -0.91
LINC00558-201ENST00000569422 C11orf96Q7Z7L8 435 aa9.36□□□□□ -0.91
LINC00558-201ENST00000569422 SNRNP27Q8WVK2 155 aaKnown RBP9.36□□□□□ -0.91
LINC00558-201ENST00000569422 GPRASP2Q96D09 838 aa9.36□□□□□ -0.91
LINC00558-201ENST00000569422 CCDC114Q96M63 670 aa9.36□□□□□ -0.91
LINC00558-201ENST00000569422 MYCBPQ99417 103 aaPredicted RBP9.36□□□□□ -0.91
LINC00558-201ENST00000569422 TEX13BQ9BXU2 312 aa9.36□□□□□ -0.91
LINC00558-201ENST00000569422 FBXO40Q9UH90 709 aa9.36□□□□□ -0.91
LINC00558-201ENST00000569422 AGO2Q9UKV8 859 aaKnown RBP9.36□□□□□ -0.91
LINC00558-201ENST00000569422 PCDHB4Q9Y5E5 795 aa9.36□□□□□ -0.91
LINC00558-201ENST00000569422 PTPRJQ12913 1337 aa9.36□□□□□ -0.91
LINC00558-201ENST00000569422 MIF4GDA9UHW6 222 aaKnown RBP9.36□□□□□ -0.91
LINC00558-201ENST00000569422 PHF2O75151 1096 aa9.36□□□□□ -0.91
LINC00558-201ENST00000569422 HLA-DRAP01903 254 aa9.36□□□□□ -0.91
LINC00558-201ENST00000569422 SRGAP2CP0DJJ0 459 aa9.36□□□□□ -0.91
LINC00558-201ENST00000569422 PEX5P50542 639 aa9.36□□□□□ -0.91
LINC00558-201ENST00000569422 GPC3P51654 580 aa9.36□□□□□ -0.91
LINC00558-201ENST00000569422 PMS2P54278 862 aa9.36□□□□□ -0.91
LINC00558-201ENST00000569422 RWDD2BP57060 319 aa9.36□□□□□ -0.91
LINC00558-201ENST00000569422 DRP2Q13474 957 aa9.36□□□□□ -0.91
LINC00558-201ENST00000569422 DUPD1Q68J44 220 aa9.36□□□□□ -0.91
LINC00558-201ENST00000569422 MIS18BP1Q6P0N0 1132 aa9.36□□□□□ -0.91
LINC00558-201ENST00000569422 RUFY4Q6ZNE9 571 aa9.36□□□□□ -0.91
LINC00558-201ENST00000569422 USP37Q86T82 979 aa9.36□□□□□ -0.91
LINC00558-201ENST00000569422 PRUNE1Q86TP1 453 aa9.36□□□□□ -0.91
LINC00558-201ENST00000569422 NCAPG2Q86XI2 1143 aa9.36□□□□□ -0.91
LINC00558-201ENST00000569422 ASAP3Q8TDY4 903 aa9.36□□□□□ -0.91
LINC00558-201ENST00000569422 ZNF302Q9NR11 478 aa9.36□□□□□ -0.91
LINC00558-201ENST00000569422 ASIC3Q9UHC3 531 aa9.36□□□□□ -0.91
LINC00558-201ENST00000569422 MTUS1Q9ULD2 1270 aa9.36□□□□□ -0.91
LINC00558-201ENST00000569422 KIAA0391O15091 583 aaKnown RBP9.35□□□□□ -0.91
LINC00558-201ENST00000569422 ZNF280AP59817 542 aaPredicted RBP9.35□□□□□ -0.91
LINC00558-201ENST00000569422 MTMR3Q13615 1198 aa9.35□□□□□ -0.91
LINC00558-201ENST00000569422 SGO2Q562F6 1265 aa9.35□□□□□ -0.91
LINC00558-201ENST00000569422 BRDTQ58F21 947 aaPredicted RBP9.35□□□□□ -0.91
LINC00558-201ENST00000569422 DENND2CQ68D51 928 aa9.35□□□□□ -0.91
LINC00558-201ENST00000569422 ACAD10Q6JQN1 1059 aa9.35□□□□□ -0.91
LINC00558-201ENST00000569422 C11orf63Q6NUN7 778 aa9.35□□□□□ -0.91
LINC00558-201ENST00000569422 SLC13A5Q86YT5 568 aaPredicted RBP9.35□□□□□ -0.91
LINC00558-201ENST00000569422 CD302Q8IX05 232 aa9.35□□□□□ -0.91
LINC00558-201ENST00000569422 MCPH1Q8NEM0 835 aa9.35□□□□□ -0.91
LINC00558-201ENST00000569422 ZBTB10Q96DT7 871 aa9.35□□□□□ -0.91
LINC00558-201ENST00000569422 PWWP2AQ96N64 755 aa9.35□□□□□ -0.91
LINC00558-201ENST00000569422 CCT8L2Q96SF2 557 aa9.35□□□□□ -0.91
LINC00558-201ENST00000569422 PPP1R16BQ96T49 567 aa9.35□□□□□ -0.91
LINC00558-201ENST00000569422 MSTO1Q9BUK6 570 aa9.35□□□□□ -0.91
LINC00558-201ENST00000569422 RBAKQ9NYW8 714 aaPredicted RBP9.35□□□□□ -0.91
LINC00558-201ENST00000569422 UMODL1Q5DID0 1318 aa9.35□□□□□ -0.91
LINC00558-201ENST00000569422 ZNF541Q9H0D2 1346 aa9.35□□□□□ -0.91
LINC00558-201ENST00000569422 TTLL13PA6NNM8 815 aa9.35□□□□□ -0.91
LINC00558-201ENST00000569422 ACSL3O95573 720 aa9.35□□□□□ -0.91
LINC00558-201ENST00000569422 GZMAP12544 262 aa9.35□□□□□ -0.91
LINC00558-201ENST00000569422 ATP4AP20648 1035 aa9.35□□□□□ -0.91
LINC00558-201ENST00000569422 NSFP46459 744 aaKnown RBP9.35□□□□□ -0.91
LINC00558-201ENST00000569422 ADCY1Q08828 1119 aa9.35□□□□□ -0.91
LINC00558-201ENST00000569422 PTGISQ16647 500 aa9.35□□□□□ -0.91
LINC00558-201ENST00000569422 TDRD10Q5VZ19 366 aaKnown RBP9.35□□□□□ -0.91
LINC00558-201ENST00000569422 KAZNQ674X7 775 aa9.35□□□□□ -0.91
LINC00558-201ENST00000569422 ABHD15Q6UXT9 468 aa9.35□□□□□ -0.91
LINC00558-201ENST00000569422 NLRP14Q86W24 1093 aa9.35□□□□□ -0.91
LINC00558-201ENST00000569422 SLC7A3Q8WY07 619 aa9.35□□□□□ -0.91
LINC00558-201ENST00000569422 RNF25Q96BH1 459 aaPredicted RBP9.35□□□□□ -0.91
LINC00558-201ENST00000569422 MFSD14AQ96MC6 490 aa9.35□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 33.8 ms