RNA–Protein interactions for RNA: ENST00000569278.1

CHRFAM7A-206, Transcript of CHRNA7 (exons 5-10) and FAM7A (exons A-E) fusion, humanhuman

TSL 3

Gene CHRFAM7A, Length 464 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRFAM7A-206ENST00000569278 HASPINQ8TF76 798 aa12.36□□□□□ -0.43
CHRFAM7A-206ENST00000569278 TCP11Q8WWU5 503 aa12.36□□□□□ -0.43
CHRFAM7A-206ENST00000569278 BSNDQ8WZ55 320 aa12.36□□□□□ -0.43
CHRFAM7A-206ENST00000569278 WASF1Q92558 559 aa12.36□□□□□ -0.43
CHRFAM7A-206ENST00000569278 EIF2AK1Q9BQI3 630 aaKnown RBP12.36□□□□□ -0.43
CHRFAM7A-206ENST00000569278 CLSTN3Q9BQT9 956 aa12.36□□□□□ -0.43
CHRFAM7A-206ENST00000569278 DDX23Q9BUQ8 820 aaKnown RBP12.36□□□□□ -0.43
CHRFAM7A-206ENST00000569278 UBN1Q9NPG3 1134 aa12.36□□□□□ -0.43
CHRFAM7A-206ENST00000569278 USP20Q9Y2K6 914 aa12.36□□□□□ -0.43
CHRFAM7A-206ENST00000569278 CASTOR2A6NHX0 329 aa12.35□□□□□ -0.43
CHRFAM7A-206ENST00000569278 H3BQV1 296 aa12.35□□□□□ -0.43
CHRFAM7A-206ENST00000569278 NRG2O14511 850 aaPredicted RBP12.35□□□□□ -0.43
CHRFAM7A-206ENST00000569278 CPLX1O14810 134 aa12.35□□□□□ -0.43
CHRFAM7A-206ENST00000569278 ZNF445P59923 1031 aa12.35□□□□□ -0.43
CHRFAM7A-206ENST00000569278 ST3GAL1Q11201 340 aa12.35□□□□□ -0.43
CHRFAM7A-206ENST00000569278 PKP1Q13835 747 aa12.35□□□□□ -0.43
CHRFAM7A-206ENST00000569278 MXD4Q14582 209 aaPredicted RBP12.35□□□□□ -0.43
CHRFAM7A-206ENST00000569278 PCBP1Q15365 356 aaKnown RBP eCLIP12.35□□□□□ -0.43
CHRFAM7A-206ENST00000569278 SPECC1Q5M775 1068 aa12.35□□□□□ -0.43
CHRFAM7A-206ENST00000569278 CD300LGQ6UXG3 332 aa12.35□□□□□ -0.43
CHRFAM7A-206ENST00000569278 RSPO2Q6UXX9 243 aaPredicted RBP12.35□□□□□ -0.43
CHRFAM7A-206ENST00000569278 TPH2Q8IWU9 490 aa12.35□□□□□ -0.43
CHRFAM7A-206ENST00000569278 SUMF1Q8NBK3 374 aa12.35□□□□□ -0.43
CHRFAM7A-206ENST00000569278 LNX1Q8TBB1 728 aaPredicted RBP12.35□□□□□ -0.43
CHRFAM7A-206ENST00000569278 STAMQ92783 540 aa12.35□□□□□ -0.43
CHRFAM7A-206ENST00000569278 POLR3FQ9H1D9 316 aaPredicted RBP12.35□□□□□ -0.43
CHRFAM7A-206ENST00000569278 PLEKHA4Q9H4M7 779 aa12.35□□□□□ -0.43
CHRFAM7A-206ENST00000569278 PDZD7Q9H5P4 517 aa12.35□□□□□ -0.43
CHRFAM7A-206ENST00000569278 SSX2IPQ9Y2D8 614 aa12.35□□□□□ -0.43
CHRFAM7A-206ENST00000569278 MTF2Q9Y483 593 aaPredicted RBP12.35□□□□□ -0.43
CHRFAM7A-206ENST00000569278 TRIP11Q15643 1979 aa12.35□□□□□ -0.43
CHRFAM7A-206ENST00000569278 KMT2BQ9UMN6 2715 aaPredicted RBP12.35□□□□□ -0.43
CHRFAM7A-206ENST00000569278 ARHGAP33O14559 1287 aa12.34□□□□□ -0.43
CHRFAM7A-206ENST00000569278 MAP3K7O43318 606 aa12.34□□□□□ -0.43
CHRFAM7A-206ENST00000569278 DKC1O60832 514 aaKnown RBP eCLIP12.34□□□□□ -0.43
CHRFAM7A-206ENST00000569278 DGAT1O75907 488 aa12.34□□□□□ -0.43
CHRFAM7A-206ENST00000569278 LMNAP02545 664 aaKnown RBP12.34□□□□□ -0.43
CHRFAM7A-206ENST00000569278 SPATA31C1P0DKV0 1188 aa12.34□□□□□ -0.43
CHRFAM7A-206ENST00000569278 STARD6P59095 220 aa12.34□□□□□ -0.43
CHRFAM7A-206ENST00000569278 GPC5P78333 572 aa12.34□□□□□ -0.43
CHRFAM7A-206ENST00000569278 HSP90AA2PQ14568 343 aaPredicted RBP12.34□□□□□ -0.43
CHRFAM7A-206ENST00000569278 USP41Q3LFD5 358 aa12.34□□□□□ -0.43
CHRFAM7A-206ENST00000569278 SMYD5Q6GMV2 418 aa12.34□□□□□ -0.43
CHRFAM7A-206ENST00000569278 SLC27A1Q6PCB7 646 aa12.34□□□□□ -0.43
CHRFAM7A-206ENST00000569278 GRASPQ7Z6J2 395 aaPredicted RBP12.34□□□□□ -0.43
CHRFAM7A-206ENST00000569278 EXOC8Q8IYI6 725 aa12.34□□□□□ -0.43
CHRFAM7A-206ENST00000569278 DCLK2Q8N568 766 aa12.34□□□□□ -0.43
CHRFAM7A-206ENST00000569278 NECAB1Q8N987 351 aa12.34□□□□□ -0.43
CHRFAM7A-206ENST00000569278 ITFG1Q8TB96 612 aa12.34□□□□□ -0.43
CHRFAM7A-206ENST00000569278 PIGOQ8TEQ8 1089 aa12.34□□□□□ -0.43
CHRFAM7A-206ENST00000569278 PIK3R5Q8WYR1 880 aa12.34□□□□□ -0.43
CHRFAM7A-206ENST00000569278 NXPE3Q969Y0 559 aa12.34□□□□□ -0.43
CHRFAM7A-206ENST00000569278 MTMR9Q96QG7 549 aa12.34□□□□□ -0.43
CHRFAM7A-206ENST00000569278 KCNK17Q96T54 332 aa12.34□□□□□ -0.43
CHRFAM7A-206ENST00000569278 COLEC11Q9BWP8 271 aa12.34□□□□□ -0.43
CHRFAM7A-206ENST00000569278 CCDC113Q9H0I3 377 aa12.34□□□□□ -0.43
CHRFAM7A-206ENST00000569278 TMEM60Q9H2L4 133 aa12.34□□□□□ -0.43
CHRFAM7A-206ENST00000569278 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP12.34□□□□□ -0.43
CHRFAM7A-206ENST00000569278 HCFC1R1Q9NWW0 138 aa12.34□□□□□ -0.43
CHRFAM7A-206ENST00000569278 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP12.34□□□□□ -0.43
CHRFAM7A-206ENST00000569278 USO1O60763 962 aaKnown RBP12.33□□□□□ -0.44
CHRFAM7A-206ENST00000569278 FSHRP23945 695 aa12.33□□□□□ -0.44
CHRFAM7A-206ENST00000569278 TUSC3Q13454 348 aa12.33□□□□□ -0.44
CHRFAM7A-206ENST00000569278 C6orf132Q5T0Z8 1188 aa12.33□□□□□ -0.44
CHRFAM7A-206ENST00000569278 EEF1DP3Q658K8 133 aa12.33□□□□□ -0.44
CHRFAM7A-206ENST00000569278 DCLRE1AQ6PJP8 1040 aa12.33□□□□□ -0.44
CHRFAM7A-206ENST00000569278 OTUD6AQ7L8S5 288 aa12.33□□□□□ -0.44
CHRFAM7A-206ENST00000569278 C1orf210Q8IVY1 113 aa12.33□□□□□ -0.44
CHRFAM7A-206ENST00000569278 KIAA2013Q8IYS2 634 aa12.33□□□□□ -0.44
CHRFAM7A-206ENST00000569278 C3orf58Q8NDZ4 430 aa12.33□□□□□ -0.44
CHRFAM7A-206ENST00000569278 FGF13Q92913 245 aa12.33□□□□□ -0.44
CHRFAM7A-206ENST00000569278 ZNF396Q96N95 335 aaPredicted RBP12.33□□□□□ -0.44
CHRFAM7A-206ENST00000569278 KRTAP3-3Q9BYR6 98 aa12.33□□□□□ -0.44
CHRFAM7A-206ENST00000569278 KRTAP3-2Q9BYR7 98 aa12.33□□□□□ -0.44
CHRFAM7A-206ENST00000569278 FZD8Q9H461 694 aa12.33□□□□□ -0.44
CHRFAM7A-206ENST00000569278 ANKEF1Q9NU02 776 aa12.33□□□□□ -0.44
CHRFAM7A-206ENST00000569278 CDH7Q9ULB5 785 aa12.33□□□□□ -0.44
CHRFAM7A-206ENST00000569278 CFAP47Q6ZTR5 3102 aa12.33□□□□□ -0.44
CHRFAM7A-206ENST00000569278 SF3B1O75533 1304 aaKnown RBP eCLIP12.33□□□□□ -0.44
CHRFAM7A-206ENST00000569278 EPG5Q9HCE0 2579 aa12.32□□□□□ -0.44
CHRFAM7A-206ENST00000569278 CCL16O15467 120 aa12.32□□□□□ -0.44
CHRFAM7A-206ENST00000569278 RECQL4O94761 1208 aa12.32□□□□□ -0.44
CHRFAM7A-206ENST00000569278 C8AP07357 584 aa12.32□□□□□ -0.44
CHRFAM7A-206ENST00000569278 TFDP1Q14186 410 aa12.32□□□□□ -0.44
CHRFAM7A-206ENST00000569278 PSMD5Q16401 504 aa12.32□□□□□ -0.44
CHRFAM7A-206ENST00000569278 FAM187BQ17R55 369 aa12.32□□□□□ -0.44
CHRFAM7A-206ENST00000569278 SLC5A9Q2M3M2 681 aa12.32□□□□□ -0.44
CHRFAM7A-206ENST00000569278 TSR1Q2NL82 804 aaKnown RBP12.32□□□□□ -0.44
CHRFAM7A-206ENST00000569278 NPAS3Q8IXF0 933 aa12.32□□□□□ -0.44
CHRFAM7A-206ENST00000569278 SLFN12Q8IYM2 578 aa12.32□□□□□ -0.44
CHRFAM7A-206ENST00000569278 NSUN7Q8NE18 718 aaKnown RBP12.32□□□□□ -0.44
CHRFAM7A-206ENST00000569278 PIDD1Q9HB75 910 aa12.32□□□□□ -0.44
CHRFAM7A-206ENST00000569278 SNTG2Q9NY99 539 aa12.32□□□□□ -0.44
CHRFAM7A-206ENST00000569278 DLL3Q9NYJ7 618 aa12.32□□□□□ -0.44
CHRFAM7A-206ENST00000569278 DPP7Q9UHL4 492 aa12.32□□□□□ -0.44
CHRFAM7A-206ENST00000569278 SIT1Q9Y3P8 196 aa12.32□□□□□ -0.44
CHRFAM7A-206ENST00000569278 SPTBN2O15020 2390 aa12.32□□□□□ -0.44
CHRFAM7A-206ENST00000569278 MEFVO15553 781 aaPredicted RBP12.31□□□□□ -0.44
CHRFAM7A-206ENST00000569278 MED24O75448 989 aa12.31□□□□□ -0.44
CHRFAM7A-206ENST00000569278 POU2F2P09086 479 aa12.31□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 37.4 ms