RNA–Protein interactions for RNA: ENST00000569001.1

BBS4-215, Transcript of Bardet-Biedl syndrome 4, human

TSL 3

Gene BBS4, Length 349 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
BBS4-215	ENST00000569001	FAM50A	Q14320	339 aa	Known RBP	4.14	□□□□□ -1.75
BBS4-215	ENST00000569001	UBXN2B	Q14CS0	331 aa		4.14	□□□□□ -1.75
BBS4-215	ENST00000569001	ACAP2	Q15057	778 aa		4.14	□□□□□ -1.75
BBS4-215	ENST00000569001	ABCB5	Q2M3G0	1257 aa		4.14	□□□□□ -1.75
BBS4-215	ENST00000569001	RNF219	Q5W0B1	726 aa	Predicted RBP	4.14	□□□□□ -1.75
BBS4-215	ENST00000569001	OLFML1	Q6UWY5	402 aa		4.14	□□□□□ -1.75
BBS4-215	ENST00000569001	GPR149	Q86SP6	731 aa		4.14	□□□□□ -1.75
BBS4-215	ENST00000569001	RHOT2	Q8IXI1	618 aa		4.14	□□□□□ -1.75
BBS4-215	ENST00000569001	RHOT1	Q8IXI2	618 aa		4.14	□□□□□ -1.75
BBS4-215	ENST00000569001	CBARP	Q8N350	705 aa	Predicted RBP	4.14	□□□□□ -1.75
BBS4-215	ENST00000569001	RNF31	Q96EP0	1072 aa		4.14	□□□□□ -1.75
BBS4-215	ENST00000569001	CRAMP1	Q96RY5	1269 aa		4.14	□□□□□ -1.75
BBS4-215	ENST00000569001	ALOXE3	Q9BYJ1	711 aa		4.14	□□□□□ -1.75
BBS4-215	ENST00000569001	SYNPO2L	Q9H987	977 aa		4.14	□□□□□ -1.75
BBS4-215	ENST00000569001	SYBU	Q9NX95	663 aa		4.14	□□□□□ -1.75
BBS4-215	ENST00000569001	SLC5A4	Q9NY91	659 aa		4.14	□□□□□ -1.75
BBS4-215	ENST00000569001	ZNHIT2	Q9UHR6	403 aa		4.14	□□□□□ -1.75
BBS4-215	ENST00000569001	TUBD1	Q9UJT1	453 aa		4.14	□□□□□ -1.75
BBS4-215	ENST00000569001	EPN1	Q9Y6I3	576 aa	Predicted RBP	4.14	□□□□□ -1.75
BBS4-215	ENST00000569001	WASHC2A	Q641Q2	1341 aa		4.14	□□□□□ -1.75
BBS4-215	ENST00000569001	PHLDB1	Q86UU1	1377 aa		4.14	□□□□□ -1.75
BBS4-215	ENST00000569001		A0A1B0GTW7	788 aa		4.13	□□□□□ -1.75
BBS4-215	ENST00000569001	DIRC3	C9JPN6	131 aa		4.13	□□□□□ -1.75
BBS4-215	ENST00000569001	GPR32	O75388	356 aa		4.13	□□□□□ -1.75
BBS4-215	ENST00000569001	CDKL5	O76039	1030 aa		4.13	□□□□□ -1.75
BBS4-215	ENST00000569001	ZFPL1	O95159	310 aa		4.13	□□□□□ -1.75
BBS4-215	ENST00000569001	POMC	P01189	267 aa		4.13	□□□□□ -1.75
BBS4-215	ENST00000569001	LMNA	P02545	664 aa	Known RBP	4.13	□□□□□ -1.75
BBS4-215	ENST00000569001	SPATA31D3	P0C874	917 aa		4.13	□□□□□ -1.75
BBS4-215	ENST00000569001	IL2RB	P14784	551 aa		4.13	□□□□□ -1.75
BBS4-215	ENST00000569001	BMPR1A	P36894	532 aa		4.13	□□□□□ -1.75
BBS4-215	ENST00000569001	CLK3	P49761	638 aa	Known RBP	4.13	□□□□□ -1.75
BBS4-215	ENST00000569001	CDKN1C	P49918	316 aa	Predicted RBP	4.13	□□□□□ -1.75
BBS4-215	ENST00000569001	USP14	P54578	494 aa		4.13	□□□□□ -1.75
BBS4-215	ENST00000569001	NOMO3	P69849	1222 aa		4.13	□□□□□ -1.75
BBS4-215	ENST00000569001	MGAT2	Q10469	447 aa		4.13	□□□□□ -1.75
BBS4-215	ENST00000569001	MTM1	Q13496	603 aa		4.13	□□□□□ -1.75
BBS4-215	ENST00000569001	NOMO2	Q5JPE7	1267 aa		4.13	□□□□□ -1.75
BBS4-215	ENST00000569001	KRTAP5-3	Q6L8H2	238 aa		4.13	□□□□□ -1.75
BBS4-215	ENST00000569001	PGM2L1	Q6PCE3	622 aa		4.13	□□□□□ -1.75
BBS4-215	ENST00000569001	SPATA31D4	Q6ZUB0	917 aa		4.13	□□□□□ -1.75
BBS4-215	ENST00000569001	AMOTL1	Q8IY63	956 aa		4.13	□□□□□ -1.75
BBS4-215	ENST00000569001	TMEM132C	Q8N3T6	1108 aa		4.13	□□□□□ -1.75
BBS4-215	ENST00000569001	DCBLD1	Q8N8Z6	715 aa		4.13	□□□□□ -1.75
BBS4-215	ENST00000569001	SUPT20H	Q8NEM7	779 aa		4.13	□□□□□ -1.75
BBS4-215	ENST00000569001	DDX55	Q8NHQ9	600 aa	Known RBP eCLIP	4.13	□□□□□ -1.75
BBS4-215	ENST00000569001	CAVIN3	Q969G5	261 aa		4.13	□□□□□ -1.75
BBS4-215	ENST00000569001	NACC2	Q96BF6	587 aa		4.13	□□□□□ -1.75
BBS4-215	ENST00000569001	MARS2	Q96GW9	593 aa	Known RBP	4.13	□□□□□ -1.75
BBS4-215	ENST00000569001	FUBP3	Q96I24	572 aa	Known RBP eCLIP	4.13	□□□□□ -1.75
BBS4-215	ENST00000569001	PRDM13	Q9H4Q3	707 aa		4.13	□□□□□ -1.75
BBS4-215	ENST00000569001	ZNF277	Q9NRM2	450 aa	Predicted RBP	4.13	□□□□□ -1.75
BBS4-215	ENST00000569001	TMEM140	Q9NV12	185 aa		4.13	□□□□□ -1.75
BBS4-215	ENST00000569001	MOCS1	Q9NZB8	636 aa		4.13	□□□□□ -1.75
BBS4-215	ENST00000569001	RNF181	Q9P0P0	153 aa		4.13	□□□□□ -1.75
BBS4-215	ENST00000569001	PCDHA13	Q9Y5I0	950 aa		4.13	□□□□□ -1.75
BBS4-215	ENST00000569001	MYBBP1A	Q9BQG0	1328 aa	Known RBP	4.13	□□□□□ -1.75
BBS4-215	ENST00000569001	PIPSL	A2A3N6	862 aa		4.12	□□□□□ -1.75
BBS4-215	ENST00000569001	PCDHGA12	O60330	932 aa		4.12	□□□□□ -1.75
BBS4-215	ENST00000569001	KATNA1	O75449	491 aa		4.12	□□□□□ -1.75
BBS4-215	ENST00000569001	ENDOD1	O94919	500 aa		4.12	□□□□□ -1.75
BBS4-215	ENST00000569001	SBK3	P0C264	359 aa		4.12	□□□□□ -1.75
BBS4-215	ENST00000569001	MYBL2	P10244	700 aa		4.12	□□□□□ -1.75
BBS4-215	ENST00000569001	C5AR1	P21730	350 aa		4.12	□□□□□ -1.75
BBS4-215	ENST00000569001	SLC6A4	P31645	630 aa		4.12	□□□□□ -1.75
BBS4-215	ENST00000569001	SEC24C	P53992	1094 aa		4.12	□□□□□ -1.75
BBS4-215	ENST00000569001	ATP8B2	P98198	1209 aa		4.12	□□□□□ -1.75
BBS4-215	ENST00000569001	TARDBP	Q13148	414 aa	Known RBP eCLIP	4.12	□□□□□ -1.75
BBS4-215	ENST00000569001	ANO4	Q32M45	955 aa		4.12	□□□□□ -1.75
BBS4-215	ENST00000569001	FAM180A	Q6UWF9	173 aa		4.12	□□□□□ -1.75
BBS4-215	ENST00000569001	DRC7	Q8IY82	874 aa		4.12	□□□□□ -1.75
BBS4-215	ENST00000569001	JADE3	Q92613	823 aa		4.12	□□□□□ -1.75
BBS4-215	ENST00000569001	GSTO2	Q9H4Y5	243 aa		4.12	□□□□□ -1.75
BBS4-215	ENST00000569001	RIOX1	Q9H6W3	641 aa		4.12	□□□□□ -1.75
BBS4-215	ENST00000569001	HSFX1	Q9UBD0	423 aa		4.12	□□□□□ -1.75
BBS4-215	ENST00000569001	TES	Q9UGI8	421 aa	Known RBP	4.12	□□□□□ -1.75
BBS4-215	ENST00000569001	PCDHGA9	Q9Y5G4	932 aa	Known RBP	4.12	□□□□□ -1.75
BBS4-215	ENST00000569001	PCDHGA8	Q9Y5G5	932 aa		4.12	□□□□□ -1.75
BBS4-215	ENST00000569001	PCDHGA7	Q9Y5G6	932 aa		4.12	□□□□□ -1.75
BBS4-215	ENST00000569001	PCDHGA6	Q9Y5G7	932 aa		4.12	□□□□□ -1.75
BBS4-215	ENST00000569001	PCDHGA3	Q9Y5H0	932 aa		4.12	□□□□□ -1.75
BBS4-215	ENST00000569001	XPOT	O43592	962 aa	Known RBP	4.11	□□□□□ -1.75
BBS4-215	ENST00000569001	NDUFS2	O75306	463 aa		4.11	□□□□□ -1.75
BBS4-215	ENST00000569001	EGR2	P11161	476 aa	Predicted RBP	4.11	□□□□□ -1.75
BBS4-215	ENST00000569001	TYRP1	P17643	537 aa		4.11	□□□□□ -1.75
BBS4-215	ENST00000569001	DDC	P20711	480 aa		4.11	□□□□□ -1.75
BBS4-215	ENST00000569001	GCSH	P23434	173 aa		4.11	□□□□□ -1.75
BBS4-215	ENST00000569001	ADRA1B	P35368	520 aa		4.11	□□□□□ -1.75
BBS4-215	ENST00000569001	CXADR	P78310	365 aa		4.11	□□□□□ -1.75
BBS4-215	ENST00000569001	FAP	Q12884	760 aa		4.11	□□□□□ -1.75
BBS4-215	ENST00000569001	IL10RA	Q13651	578 aa		4.11	□□□□□ -1.75
BBS4-215	ENST00000569001	PCBP2	Q15366	365 aa	Known RBP eCLIP	4.11	□□□□□ -1.75
BBS4-215	ENST00000569001	GEN1	Q17RS7	908 aa		4.11	□□□□□ -1.75
BBS4-215	ENST00000569001	INAVA	Q3KP66	663 aa		4.11	□□□□□ -1.75
BBS4-215	ENST00000569001	C3orf36	Q3SXR2	165 aa		4.11	□□□□□ -1.75
BBS4-215	ENST00000569001	OTUD7B	Q6GQQ9	843 aa		4.11	□□□□□ -1.75
BBS4-215	ENST00000569001	RAB11FIP1	Q6WKZ4	1283 aa	Predicted RBP	4.11	□□□□□ -1.75
BBS4-215	ENST00000569001	SEM1	Q6ZVN7	128 aa		4.11	□□□□□ -1.75
BBS4-215	ENST00000569001	ZNF575	Q86XF7	245 aa		4.11	□□□□□ -1.75
BBS4-215	ENST00000569001	C1orf162	Q8NEQ5	155 aa	Predicted RBP	4.11	□□□□□ -1.75

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