RNA–Protein interactions for RNA: ENST00000568782.1

UBR1-207, Transcript of ubiquitin protein ligase E3 component n-recognin 1, human

TSL 3

Gene UBR1, Length 615 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
UBR1-207	ENST00000568782	CUTA	O60888	179 aa		11.31	□□□□□ -0.6
UBR1-207	ENST00000568782	LILRB3	O75022	631 aa		11.31	□□□□□ -0.6
UBR1-207	ENST00000568782	KIF4A	O95239	1232 aa		11.31	□□□□□ -0.6
UBR1-207	ENST00000568782	EDN1	P05305	212 aa		11.31	□□□□□ -0.6
UBR1-207	ENST00000568782	KCNE1	P15382	129 aa		11.31	□□□□□ -0.6
UBR1-207	ENST00000568782	PROZ	P22891	400 aa		11.31	□□□□□ -0.6
UBR1-207	ENST00000568782	ME1	P48163	572 aa		11.31	□□□□□ -0.6
UBR1-207	ENST00000568782	CLCNKB	P51801	687 aa		11.31	□□□□□ -0.6
UBR1-207	ENST00000568782	ZNF131	P52739	623 aa		11.31	□□□□□ -0.6
UBR1-207	ENST00000568782	MCL1	Q07820	350 aa		11.31	□□□□□ -0.6
UBR1-207	ENST00000568782	BECN1	Q14457	450 aa		11.31	□□□□□ -0.6
UBR1-207	ENST00000568782	POSTN	Q15063	836 aa		11.31	□□□□□ -0.6
UBR1-207	ENST00000568782	FOXD4L6	Q3SYB3	417 aa	Predicted RBP	11.31	□□□□□ -0.6
UBR1-207	ENST00000568782	LIN9	Q5TKA1	542 aa		11.31	□□□□□ -0.6
UBR1-207	ENST00000568782	FOXD4L3	Q6VB84	417 aa	Predicted RBP	11.31	□□□□□ -0.6
UBR1-207	ENST00000568782	C15orf39	Q6ZRI6	1047 aa		11.31	□□□□□ -0.6
UBR1-207	ENST00000568782	CCDC149	Q6ZUS6	474 aa		11.31	□□□□□ -0.6
UBR1-207	ENST00000568782	ANKS3	Q6ZW76	656 aa		11.31	□□□□□ -0.6
UBR1-207	ENST00000568782	TAS1R3	Q7RTX0	852 aa		11.31	□□□□□ -0.6
UBR1-207	ENST00000568782	GLYCTK	Q8IVS8	523 aa		11.31	□□□□□ -0.6
UBR1-207	ENST00000568782	CD302	Q8IX05	232 aa		11.31	□□□□□ -0.6
UBR1-207	ENST00000568782	CCDC65	Q8IXS2	484 aa		11.31	□□□□□ -0.6
UBR1-207	ENST00000568782	RNF168	Q8IYW5	571 aa	Predicted RBP	11.31	□□□□□ -0.6
UBR1-207	ENST00000568782	SYCP3	Q8IZU3	236 aa		11.31	□□□□□ -0.6
UBR1-207	ENST00000568782	PDILT	Q8N807	584 aa		11.31	□□□□□ -0.6
UBR1-207	ENST00000568782	C12orf76	Q8N812	135 aa	Predicted RBP	11.31	□□□□□ -0.6
UBR1-207	ENST00000568782	CEP120	Q8N960	986 aa		11.31	□□□□□ -0.6
UBR1-207	ENST00000568782	IQUB	Q8NA54	791 aa		11.31	□□□□□ -0.6
UBR1-207	ENST00000568782	TDRD5	Q8NAT2	981 aa	Known RBP	11.31	□□□□□ -0.6
UBR1-207	ENST00000568782	LINC00301	Q8NCQ3	95 aa		11.31	□□□□□ -0.6
UBR1-207	ENST00000568782	DDX12P	Q92771	950 aa		11.31	□□□□□ -0.6
UBR1-207	ENST00000568782	HVCN1	Q96D96	273 aa		11.31	□□□□□ -0.6
UBR1-207	ENST00000568782	FAM212A	Q96EL1	285 aa		11.31	□□□□□ -0.6
UBR1-207	ENST00000568782	ZBTB45	Q96K62	511 aa	Predicted RBP	11.31	□□□□□ -0.6
UBR1-207	ENST00000568782	SNX27	Q96L92	541 aa		11.31	□□□□□ -0.6
UBR1-207	ENST00000568782	PYM1	Q9BRP8	204 aa	Known RBP	11.31	□□□□□ -0.6
UBR1-207	ENST00000568782	CUEDC2	Q9H467	287 aa		11.31	□□□□□ -0.6
UBR1-207	ENST00000568782	FAM13B	Q9NYF5	915 aa		11.31	□□□□□ -0.6
UBR1-207	ENST00000568782	HCN4	Q9Y3Q4	1203 aa		11.31	□□□□□ -0.6
UBR1-207	ENST00000568782	ATP6V1D	Q9Y5K8	247 aa		11.31	□□□□□ -0.6
UBR1-207	ENST00000568782	PLXNA3	P51805	1871 aa		11.31	□□□□□ -0.6
UBR1-207	ENST00000568782	C5orf42	Q9H799	3197 aa		11.31	□□□□□ -0.6
UBR1-207	ENST00000568782	CCDC195	A0A1B0GUA6	201 aa		11.3	□□□□□ -0.6
UBR1-207	ENST00000568782		H7C4K7	107 aa		11.3	□□□□□ -0.6
UBR1-207	ENST00000568782	PODXL	O00592	558 aa		11.3	□□□□□ -0.6
UBR1-207	ENST00000568782	OGT	O15294	1046 aa		11.3	□□□□□ -0.6
UBR1-207	ENST00000568782	GPR37L1	O60883	481 aa		11.3	□□□□□ -0.6
UBR1-207	ENST00000568782	F13A1	P00488	732 aa		11.3	□□□□□ -0.6
UBR1-207	ENST00000568782	SP100	P23497	879 aa	Predicted RBP	11.3	□□□□□ -0.6
UBR1-207	ENST00000568782	ELF1	P32519	619 aa		11.3	□□□□□ -0.6
UBR1-207	ENST00000568782	MCM4	P33991	863 aa		11.3	□□□□□ -0.6
UBR1-207	ENST00000568782	GTF2B	Q00403	316 aa		11.3	□□□□□ -0.6
UBR1-207	ENST00000568782	ALCAM	Q13740	583 aa		11.3	□□□□□ -0.6
UBR1-207	ENST00000568782	UPP1	Q16831	310 aa		11.3	□□□□□ -0.6
UBR1-207	ENST00000568782	HERC4	Q5GLZ8	1057 aa	Predicted RBP	11.3	□□□□□ -0.6
UBR1-207	ENST00000568782	ADAL	Q6DHV7	355 aa		11.3	□□□□□ -0.6
UBR1-207	ENST00000568782	ALKAL1	Q6UXT8	129 aa		11.3	□□□□□ -0.6
UBR1-207	ENST00000568782	USP49	Q70CQ1	688 aa		11.3	□□□□□ -0.6
UBR1-207	ENST00000568782	OTOP3	Q7RTS5	596 aa		11.3	□□□□□ -0.6
UBR1-207	ENST00000568782	GPR149	Q86SP6	731 aa		11.3	□□□□□ -0.6
UBR1-207	ENST00000568782	APPL2	Q8NEU8	664 aa		11.3	□□□□□ -0.6
UBR1-207	ENST00000568782	PIK3R5	Q8WYR1	880 aa		11.3	□□□□□ -0.6
UBR1-207	ENST00000568782	KCNN1	Q92952	543 aa		11.3	□□□□□ -0.6
UBR1-207	ENST00000568782	KIF12	Q96FN5	646 aa		11.3	□□□□□ -0.6
UBR1-207	ENST00000568782	B3GALT6	Q96L58	329 aa		11.3	□□□□□ -0.6
UBR1-207	ENST00000568782	PAAF1	Q9BRP4	392 aa		11.3	□□□□□ -0.6
UBR1-207	ENST00000568782	CNTN3	Q9P232	1028 aa		11.3	□□□□□ -0.6
UBR1-207	ENST00000568782	MUTYH	Q9UIF7	546 aa		11.3	□□□□□ -0.6
UBR1-207	ENST00000568782	UST	Q9Y2C2	406 aa		11.3	□□□□□ -0.6
UBR1-207	ENST00000568782	C2orf16	Q68DN1	1984 aa		11.29	□□□□□ -0.6
UBR1-207	ENST00000568782	ARHGEF37	A1IGU5	675 aa		11.29	□□□□□ -0.6
UBR1-207	ENST00000568782	PRR33	A8MZF0	331 aa		11.29	□□□□□ -0.6
UBR1-207	ENST00000568782		F8W810	466 aa		11.29	□□□□□ -0.6
UBR1-207	ENST00000568782	GCNT3	O95395	438 aa		11.29	□□□□□ -0.6
UBR1-207	ENST00000568782	PIGR	P01833	764 aa		11.29	□□□□□ -0.6
UBR1-207	ENST00000568782	COL9A1	P20849	921 aa		11.29	□□□□□ -0.6
UBR1-207	ENST00000568782	NMT1	P30419	496 aa	Known RBP	11.29	□□□□□ -0.6
UBR1-207	ENST00000568782	SEZ6	Q53EL9	994 aa		11.29	□□□□□ -0.6
UBR1-207	ENST00000568782	XKR4	Q5GH76	650 aa		11.29	□□□□□ -0.6
UBR1-207	ENST00000568782	PRSS55	Q6UWB4	352 aa	Predicted RBP	11.29	□□□□□ -0.6
UBR1-207	ENST00000568782	ZNF720	Q7Z2F6	126 aa		11.29	□□□□□ -0.6
UBR1-207	ENST00000568782	SFR1	Q86XK3	245 aa		11.29	□□□□□ -0.6
UBR1-207	ENST00000568782	KREMEN2	Q8NCW0	462 aa		11.29	□□□□□ -0.6
UBR1-207	ENST00000568782	BEST2	Q8NFU1	509 aa		11.29	□□□□□ -0.6
UBR1-207	ENST00000568782	CMAS	Q8NFW8	434 aa	Predicted RBP	11.29	□□□□□ -0.6
UBR1-207	ENST00000568782	POMGNT1	Q8WZA1	660 aa		11.29	□□□□□ -0.6
UBR1-207	ENST00000568782	SMG7	Q92540	1137 aa	Known RBP	11.29	□□□□□ -0.6
UBR1-207	ENST00000568782	ACCS	Q96QU6	501 aa		11.29	□□□□□ -0.6
UBR1-207	ENST00000568782	TNMD	Q9H2S6	317 aa		11.29	□□□□□ -0.6
UBR1-207	ENST00000568782	ST6GALNAC4	Q9H4F1	302 aa		11.29	□□□□□ -0.6
UBR1-207	ENST00000568782	POMK	Q9H5K3	350 aa		11.29	□□□□□ -0.6
UBR1-207	ENST00000568782	TMEM206	Q9H813	350 aa		11.29	□□□□□ -0.6
UBR1-207	ENST00000568782	GOLGA2P5	Q9HBQ8	144 aa		11.29	□□□□□ -0.6
UBR1-207	ENST00000568782	PANK4	Q9NVE7	773 aa		11.29	□□□□□ -0.6
UBR1-207	ENST00000568782	ZDHHC7	Q9NXF8	308 aa		11.29	□□□□□ -0.6
UBR1-207	ENST00000568782	CACNG4	Q9UBN1	327 aa		11.29	□□□□□ -0.6
UBR1-207	ENST00000568782	UBQLN1	Q9UMX0	589 aa	Known RBP	11.29	□□□□□ -0.6
UBR1-207	ENST00000568782	R3HCC1	Q9Y3T6	440 aa	Known RBP	11.29	□□□□□ -0.6
UBR1-207	ENST00000568782	TCHH	Q07283	1943 aa		11.29	□□□□□ -0.6
UBR1-207	ENST00000568782	SYN3	O14994	580 aa		11.28	□□□□□ -0.6

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