RNA–Protein interactions for RNA: ENST00000568153.1

CAPN3-218, Transcript of calpain 3, humanhuman

TSL 5

Gene CAPN3, Length 598 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN3-218ENST00000568153 MED24O75448 989 aa6.81□□□□□ -1.32
CAPN3-218ENST00000568153 STAM2O75886 525 aa6.81□□□□□ -1.32
CAPN3-218ENST00000568153 SLITRK3O94933 977 aa6.81□□□□□ -1.32
CAPN3-218ENST00000568153 EOMESO95936 686 aa6.81□□□□□ -1.32
CAPN3-218ENST00000568153 SERPINC1P01008 464 aa6.81□□□□□ -1.32
CAPN3-218ENST00000568153 SSBP05455 408 aaKnown RBP eCLIP6.81□□□□□ -1.32
CAPN3-218ENST00000568153 PLA2G4BP0C869 781 aa6.81□□□□□ -1.32
CAPN3-218ENST00000568153 CETPP11597 493 aa6.81□□□□□ -1.32
CAPN3-218ENST00000568153 COPB2P35606 906 aa6.81□□□□□ -1.32
CAPN3-218ENST00000568153 PRCPP42785 496 aa6.81□□□□□ -1.32
CAPN3-218ENST00000568153 GTF2A2P52657 109 aa6.81□□□□□ -1.32
CAPN3-218ENST00000568153 ASIC1P78348 528 aa6.81□□□□□ -1.32
CAPN3-218ENST00000568153 MRPS9P82933 396 aaKnown RBP6.81□□□□□ -1.32
CAPN3-218ENST00000568153 CYP27A1Q02318 531 aa6.81□□□□□ -1.32
CAPN3-218ENST00000568153 SPIRE1Q08AE8 756 aa6.81□□□□□ -1.32
CAPN3-218ENST00000568153 PGM5Q15124 567 aa6.81□□□□□ -1.32
CAPN3-218ENST00000568153 UNC13DQ70J99 1090 aa6.81□□□□□ -1.32
CAPN3-218ENST00000568153 ARHGAP30Q7Z6I6 1101 aaPredicted RBP6.81□□□□□ -1.32
CAPN3-218ENST00000568153 TPH2Q8IWU9 490 aa6.81□□□□□ -1.32
CAPN3-218ENST00000568153 ADSSL1Q8N142 457 aa6.81□□□□□ -1.32
CAPN3-218ENST00000568153 SYT2Q8N9I0 419 aaPredicted RBP6.81□□□□□ -1.32
CAPN3-218ENST00000568153 GIMAP8Q8ND71 665 aaPredicted RBP6.81□□□□□ -1.32
CAPN3-218ENST00000568153 DNERQ8NFT8 737 aa6.81□□□□□ -1.32
CAPN3-218ENST00000568153 MRFAP1L1Q96HT8 127 aa6.81□□□□□ -1.32
CAPN3-218ENST00000568153 DHTKD1Q96HY7 919 aaPredicted RBP6.81□□□□□ -1.32
CAPN3-218ENST00000568153 MIPEPQ99797 713 aa6.81□□□□□ -1.32
CAPN3-218ENST00000568153 TINF2Q9BSI4 451 aa6.81□□□□□ -1.32
CAPN3-218ENST00000568153 TEKT3Q9BXF9 490 aa6.81□□□□□ -1.32
CAPN3-218ENST00000568153 TRIM9Q9C026 710 aa6.81□□□□□ -1.32
CAPN3-218ENST00000568153 SPATC1LQ9H0A9 340 aa6.81□□□□□ -1.32
CAPN3-218ENST00000568153 CAPN10Q9HC96 672 aa6.81□□□□□ -1.32
CAPN3-218ENST00000568153 GBA2Q9HCG7 927 aaPredicted RBP6.81□□□□□ -1.32
CAPN3-218ENST00000568153 AGO4Q9HCK5 861 aaKnown RBP6.81□□□□□ -1.32
CAPN3-218ENST00000568153 TUFT1Q9NNX1 390 aa6.81□□□□□ -1.32
CAPN3-218ENST00000568153 KCNH7Q9NS40 1196 aa6.81□□□□□ -1.32
CAPN3-218ENST00000568153 EXOC1Q9NV70 894 aa6.81□□□□□ -1.32
CAPN3-218ENST00000568153 CYP39A1Q9NYL5 469 aa6.81□□□□□ -1.32
CAPN3-218ENST00000568153 BTBD7Q9P203 1132 aa6.81□□□□□ -1.32
CAPN3-218ENST00000568153 RWDD2AQ9UIY3 292 aa6.81□□□□□ -1.32
CAPN3-218ENST00000568153 VAV3Q9UKW4 847 aa6.81□□□□□ -1.32
CAPN3-218ENST00000568153 PPT2Q9UMR5 302 aa6.81□□□□□ -1.32
CAPN3-218ENST00000568153 EFR3BQ9Y2G0 817 aa6.81□□□□□ -1.32
CAPN3-218ENST00000568153 SSC5DA1L4H1 1573 aa6.81□□□□□ -1.32
CAPN3-218ENST00000568153 PFASO15067 1338 aa6.8□□□□□ -1.32
CAPN3-218ENST00000568153 SLC22A31A6NKX4 558 aa6.8□□□□□ -1.32
CAPN3-218ENST00000568153 RBAK-RBAKDNI3L0D1 243 aa6.8□□□□□ -1.32
CAPN3-218ENST00000568153 EIF3JO75822 258 aaKnown RBP6.8□□□□□ -1.32
CAPN3-218ENST00000568153 CELF2O95319 508 aaKnown RBP6.8□□□□□ -1.32
CAPN3-218ENST00000568153 EYA4O95677 639 aa6.8□□□□□ -1.32
CAPN3-218ENST00000568153 KRT18P05783 430 aaKnown RBP6.8□□□□□ -1.32
CAPN3-218ENST00000568153 SOX9P48436 509 aa6.8□□□□□ -1.32
CAPN3-218ENST00000568153 YARSP54577 528 aaKnown RBP6.8□□□□□ -1.32
CAPN3-218ENST00000568153 STX17P56962 302 aa6.8□□□□□ -1.32
CAPN3-218ENST00000568153 UBASH3AP57075 661 aa6.8□□□□□ -1.32
CAPN3-218ENST00000568153 HERVK_113P62684 666 aa6.8□□□□□ -1.32
CAPN3-218ENST00000568153 MTMR1Q13613 665 aa6.8□□□□□ -1.32
CAPN3-218ENST00000568153 MOGSQ13724 837 aa6.8□□□□□ -1.32
CAPN3-218ENST00000568153 STXBP2Q15833 593 aa6.8□□□□□ -1.32
CAPN3-218ENST00000568153 CYP27C1Q4G0S4 372 aa6.8□□□□□ -1.32
CAPN3-218ENST00000568153 COBLL1Q53SF7 1204 aa6.8□□□□□ -1.32
CAPN3-218ENST00000568153 KLHL10Q6JEL2 608 aa6.8□□□□□ -1.32
CAPN3-218ENST00000568153 LETMD1Q6P1Q0 360 aa6.8□□□□□ -1.32
CAPN3-218ENST00000568153 SLC30A10Q6XR72 485 aa6.8□□□□□ -1.32
CAPN3-218ENST00000568153 FAM214BQ7L5A3 538 aa6.8□□□□□ -1.32
CAPN3-218ENST00000568153 MIER3Q7Z3K6 550 aa6.8□□□□□ -1.32
CAPN3-218ENST00000568153 KCNK18Q7Z418 384 aa6.8□□□□□ -1.32
CAPN3-218ENST00000568153 CCDC65Q8IXS2 484 aa6.8□□□□□ -1.32
CAPN3-218ENST00000568153 SPC24Q8NBT2 197 aa6.8□□□□□ -1.32
CAPN3-218ENST00000568153 LRRC15Q8TF66 581 aa6.8□□□□□ -1.32
CAPN3-218ENST00000568153 NELFBQ8WX92 580 aa6.8□□□□□ -1.32
CAPN3-218ENST00000568153 DYDC2Q96IM9 177 aa6.8□□□□□ -1.32
CAPN3-218ENST00000568153 CDHR1Q96JP9 859 aa6.8□□□□□ -1.32
CAPN3-218ENST00000568153 PAGR1Q9BTK6 254 aa6.8□□□□□ -1.32
CAPN3-218ENST00000568153 UNC45AQ9H3U1 944 aa6.8□□□□□ -1.32
CAPN3-218ENST00000568153 A1CFQ9NQ94 594 aaKnown RBP6.8□□□□□ -1.32
CAPN3-218ENST00000568153 PANK4Q9NVE7 773 aa6.8□□□□□ -1.32
CAPN3-218ENST00000568153 RGL1Q9NZL6 768 aa6.8□□□□□ -1.32
CAPN3-218ENST00000568153 IFNKQ9P0W0 207 aa6.8□□□□□ -1.32
CAPN3-218ENST00000568153 GMIPQ9P107 970 aa6.8□□□□□ -1.32
CAPN3-218ENST00000568153 RBPJLQ9UBG7 517 aa6.8□□□□□ -1.32
CAPN3-218ENST00000568153 SLC45A1Q9Y2W3 748 aa6.8□□□□□ -1.32
CAPN3-218ENST00000568153 NFE2L3Q9Y4A8 694 aa6.8□□□□□ -1.32
CAPN3-218ENST00000568153 U3KQE9 123 aa6.8□□□□□ -1.32
CAPN3-218ENST00000568153 FRMPD4Q14CM0 1322 aa6.79□□□□□ -1.32
CAPN3-218ENST00000568153 GOLGB1Q14789 3259 aaKnown RBP6.79□□□□□ -1.32
CAPN3-218ENST00000568153 BICDL2A1A5D9 508 aa6.79□□□□□ -1.32
CAPN3-218ENST00000568153 LRRC10BA6NIK2 292 aa6.79□□□□□ -1.32
CAPN3-218ENST00000568153 PSMA7O14818 248 aa6.79□□□□□ -1.32
CAPN3-218ENST00000568153 CHMP2AO43633 222 aa6.79□□□□□ -1.32
CAPN3-218ENST00000568153 CNMDO75829 334 aa6.79□□□□□ -1.32
CAPN3-218ENST00000568153 KIF20AO95235 890 aa6.79□□□□□ -1.32
CAPN3-218ENST00000568153 FGFR1OPO95684 399 aaKnown RBP6.79□□□□□ -1.32
CAPN3-218ENST00000568153 IDEP14735 1019 aa6.79□□□□□ -1.32
CAPN3-218ENST00000568153 CYP11B2P19099 503 aa6.79□□□□□ -1.32
CAPN3-218ENST00000568153 SLC12A3P55017 1021 aa6.79□□□□□ -1.32
CAPN3-218ENST00000568153 PSMC6P62333 389 aa6.79□□□□□ -1.32
CAPN3-218ENST00000568153 STK4Q13043 487 aa6.79□□□□□ -1.32
CAPN3-218ENST00000568153 PAK1Q13153 545 aa6.79□□□□□ -1.32
CAPN3-218ENST00000568153 COL9A2Q14055 689 aaPredicted RBP6.79□□□□□ -1.32
CAPN3-218ENST00000568153 CTTNQ14247 550 aaKnown RBP6.79□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 18.9 ms