RNA–Protein interactions for RNA: ENST00000567635.5

SF3B3-209, Transcript of splicing factor 3b subunit 3, humanhuman

TSL 5

Gene SF3B3, Length 630 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B3-209ENST00000567635 SCN1AP35498 2009 aa7.57□□□□□ -1.2
SF3B3-209ENST00000567635 NOTCH4Q99466 2003 aa7.57□□□□□ -1.2
SF3B3-209ENST00000567635 TMEM189-UBE2V1I3L0A0 370 aa7.56□□□□□ -1.2
SF3B3-209ENST00000567635 HAX1O00165 279 aa7.56□□□□□ -1.2
SF3B3-209ENST00000567635 TGM5O43548 720 aa7.56□□□□□ -1.2
SF3B3-209ENST00000567635 TRAK2O60296 914 aa7.56□□□□□ -1.2
SF3B3-209ENST00000567635 KIF4AO95239 1232 aa7.56□□□□□ -1.2
SF3B3-209ENST00000567635 CLTAP09496 248 aa7.56□□□□□ -1.2
SF3B3-209ENST00000567635 MYBP10242 640 aa7.56□□□□□ -1.2
SF3B3-209ENST00000567635 HARSP12081 509 aaKnown RBP7.56□□□□□ -1.2
SF3B3-209ENST00000567635 PDIA4P13667 645 aaKnown RBP7.56□□□□□ -1.2
SF3B3-209ENST00000567635 KCNE1P15382 129 aa7.56□□□□□ -1.2
SF3B3-209ENST00000567635 RPL17P18621 184 aaKnown RBP7.56□□□□□ -1.2
SF3B3-209ENST00000567635 SP100P23497 879 aaPredicted RBP7.56□□□□□ -1.2
SF3B3-209ENST00000567635 RPL9P32969 192 aaKnown RBP7.56□□□□□ -1.2
SF3B3-209ENST00000567635 ABCD1P33897 745 aa7.56□□□□□ -1.2
SF3B3-209ENST00000567635 TXLNAP40222 546 aa7.56□□□□□ -1.2
SF3B3-209ENST00000567635 MATR3P43243 847 aaKnown RBP eCLIP7.56□□□□□ -1.2
SF3B3-209ENST00000567635 ZNF131P52739 623 aa7.56□□□□□ -1.2
SF3B3-209ENST00000567635 MCL1Q07820 350 aa7.56□□□□□ -1.2
SF3B3-209ENST00000567635 NOLC1Q14978 699 aaKnown RBP eCLIP7.56□□□□□ -1.2
SF3B3-209ENST00000567635 KYAT1Q16773 422 aa7.56□□□□□ -1.2
SF3B3-209ENST00000567635 UPP1Q16831 310 aa7.56□□□□□ -1.2
SF3B3-209ENST00000567635 SLC10A6Q3KNW5 377 aa7.56□□□□□ -1.2
SF3B3-209ENST00000567635 GLRA4Q5JXX5 417 aa7.56□□□□□ -1.2
SF3B3-209ENST00000567635 RRAGBQ5VZM2 374 aa7.56□□□□□ -1.2
SF3B3-209ENST00000567635 PDXDC1Q6P996 788 aa7.56□□□□□ -1.2
SF3B3-209ENST00000567635 PRSS55Q6UWB4 352 aaPredicted RBP7.56□□□□□ -1.2
SF3B3-209ENST00000567635 C15orf39Q6ZRI6 1047 aa7.56□□□□□ -1.2
SF3B3-209ENST00000567635 TRIM67Q6ZTA4 783 aa7.56□□□□□ -1.2
SF3B3-209ENST00000567635 GLYCTKQ8IVS8 523 aa7.56□□□□□ -1.2
SF3B3-209ENST00000567635 ZDHHC14Q8IZN3 488 aa7.56□□□□□ -1.2
SF3B3-209ENST00000567635 CEP120Q8N960 986 aa7.56□□□□□ -1.2
SF3B3-209ENST00000567635 KRI1Q8N9T8 703 aaKnown RBP7.56□□□□□ -1.2
SF3B3-209ENST00000567635 CMASQ8NFW8 434 aaPredicted RBP7.56□□□□□ -1.2
SF3B3-209ENST00000567635 PIK3R5Q8WYR1 880 aa7.56□□□□□ -1.2
SF3B3-209ENST00000567635 KCNN1Q92952 543 aa7.56□□□□□ -1.2
SF3B3-209ENST00000567635 BICD1Q96G01 975 aa7.56□□□□□ -1.2
SF3B3-209ENST00000567635 SNX27Q96L92 541 aa7.56□□□□□ -1.2
SF3B3-209ENST00000567635 ZMAT2Q96NC0 199 aaKnown RBP7.56□□□□□ -1.2
SF3B3-209ENST00000567635 CLIC6Q96NY7 704 aa7.56□□□□□ -1.2
SF3B3-209ENST00000567635 CLSTN3Q9BQT9 956 aa7.56□□□□□ -1.2
SF3B3-209ENST00000567635 PLEKHA5Q9HAU0 1116 aa7.56□□□□□ -1.2
SF3B3-209ENST00000567635 PARVGQ9HBI0 331 aa7.56□□□□□ -1.2
SF3B3-209ENST00000567635 MAN1C1Q9NR34 630 aa7.56□□□□□ -1.2
SF3B3-209ENST00000567635 ANKFY1Q9P2R3 1169 aa7.56□□□□□ -1.2
SF3B3-209ENST00000567635 TFIP11Q9UBB9 837 aaKnown RBP7.56□□□□□ -1.2
SF3B3-209ENST00000567635 STK17AQ9UEE5 414 aa7.56□□□□□ -1.2
SF3B3-209ENST00000567635 LIMD1Q9UGP4 676 aa7.56□□□□□ -1.2
SF3B3-209ENST00000567635 TBX20Q9UMR3 447 aa7.56□□□□□ -1.2
SF3B3-209ENST00000567635 USTQ9Y2C2 406 aa7.56□□□□□ -1.2
SF3B3-209ENST00000567635 ARIH1Q9Y4X5 557 aaPredicted RBP7.56□□□□□ -1.2
SF3B3-209ENST00000567635 MORC2Q9Y6X9 1032 aaPredicted RBP7.56□□□□□ -1.2
SF3B3-209ENST00000567635 TMEM221A6NGB7 291 aa7.55□□□□□ -1.2
SF3B3-209ENST00000567635 C2CD4DB7Z1M9 353 aa7.55□□□□□ -1.2
SF3B3-209ENST00000567635 K7ENM7 598 aa7.55□□□□□ -1.2
SF3B3-209ENST00000567635 M0R296 226 aa7.55□□□□□ -1.2
SF3B3-209ENST00000567635 TBCAO75347 108 aaKnown RBP7.55□□□□□ -1.2
SF3B3-209ENST00000567635 PAPLNO95428 1278 aa7.55□□□□□ -1.2
SF3B3-209ENST00000567635 HSP90AA1P07900 732 aaKnown RBP7.55□□□□□ -1.2
SF3B3-209ENST00000567635 FGFR3P22607 806 aa7.55□□□□□ -1.2
SF3B3-209ENST00000567635 IGFBP6P24592 240 aaPredicted RBP7.55□□□□□ -1.2
SF3B3-209ENST00000567635 OR1D2P34982 312 aa7.55□□□□□ -1.2
SF3B3-209ENST00000567635 LIG4P49917 911 aa7.55□□□□□ -1.2
SF3B3-209ENST00000567635 CLCNKBP51801 687 aa7.55□□□□□ -1.2
SF3B3-209ENST00000567635 SOX4Q06945 474 aaPredicted RBP7.55□□□□□ -1.2
SF3B3-209ENST00000567635 PSMD5Q16401 504 aa7.55□□□□□ -1.2
SF3B3-209ENST00000567635 PTPN21Q16825 1174 aa7.55□□□□□ -1.2
SF3B3-209ENST00000567635 SEZ6Q53EL9 994 aa7.55□□□□□ -1.2
SF3B3-209ENST00000567635 RTP2Q5QGT7 225 aa7.55□□□□□ -1.2
SF3B3-209ENST00000567635 CD300LGQ6UXG3 332 aa7.55□□□□□ -1.2
SF3B3-209ENST00000567635 PDZRN4Q6ZMN7 1036 aaPredicted RBP7.55□□□□□ -1.2
SF3B3-209ENST00000567635 HFE2Q6ZVN8 426 aa7.55□□□□□ -1.2
SF3B3-209ENST00000567635 SV2BQ7L1I2 683 aa7.55□□□□□ -1.2
SF3B3-209ENST00000567635 OTOP3Q7RTS5 596 aa7.55□□□□□ -1.2
SF3B3-209ENST00000567635 DYMQ7RTS9 669 aa7.55□□□□□ -1.2
SF3B3-209ENST00000567635 BMP8AQ7Z5Y6 402 aa7.55□□□□□ -1.2
SF3B3-209ENST00000567635 HSCBQ8IWL3 235 aa7.55□□□□□ -1.2
SF3B3-209ENST00000567635 TDRD5Q8NAT2 981 aaKnown RBP7.55□□□□□ -1.2
SF3B3-209ENST00000567635 KREMEN2Q8NCW0 462 aa7.55□□□□□ -1.2
SF3B3-209ENST00000567635 LNX1Q8TBB1 728 aaPredicted RBP7.55□□□□□ -1.2
SF3B3-209ENST00000567635 FEZF2Q8TBJ5 459 aa7.55□□□□□ -1.2
SF3B3-209ENST00000567635 SMG7Q92540 1137 aaKnown RBP7.55□□□□□ -1.2
SF3B3-209ENST00000567635 PBXIP1Q96AQ6 731 aa7.55□□□□□ -1.2
SF3B3-209ENST00000567635 C18orf25Q96B23 403 aaPredicted RBP7.55□□□□□ -1.2
SF3B3-209ENST00000567635 ACSF2Q96CM8 615 aaPredicted RBP7.55□□□□□ -1.2
SF3B3-209ENST00000567635 MFSD14AQ96MC6 490 aa7.55□□□□□ -1.2
SF3B3-209ENST00000567635 ZNF396Q96N95 335 aaPredicted RBP7.55□□□□□ -1.2
SF3B3-209ENST00000567635 USP28Q96RU2 1077 aa7.55□□□□□ -1.2
SF3B3-209ENST00000567635 RHOBTB2Q9BYZ6 727 aa7.55□□□□□ -1.2
SF3B3-209ENST00000567635 PANK2Q9BZ23 570 aa7.55□□□□□ -1.2
SF3B3-209ENST00000567635 PRKD2Q9BZL6 878 aa7.55□□□□□ -1.2
SF3B3-209ENST00000567635 HAPLN2Q9GZV7 340 aa7.55□□□□□ -1.2
SF3B3-209ENST00000567635 PIDD1Q9HB75 910 aa7.55□□□□□ -1.2
SF3B3-209ENST00000567635 GOLGA2P5Q9HBQ8 144 aa7.55□□□□□ -1.2
SF3B3-209ENST00000567635 ZDHHC7Q9NXF8 308 aa7.55□□□□□ -1.2
SF3B3-209ENST00000567635 CNTN3Q9P232 1028 aa7.55□□□□□ -1.2
SF3B3-209ENST00000567635 HCN4Q9Y3Q4 1203 aa7.55□□□□□ -1.2
SF3B3-209ENST00000567635 ZNF638Q14966 1978 aaKnown RBP7.54□□□□□ -1.2
SF3B3-209ENST00000567635 A0A0B4J269 797 aa7.54□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 42.7 ms