RNA–Protein interactions for RNA: ENST00000567320.1

CDH1-211, Transcript of cadherin 1, humanhuman

TSL 3

Gene CDH1, Length 352 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH1-211ENST00000567320 ZNF384Q8TF68 577 aa4.63□□□□□ -1.67
CDH1-211ENST00000567320 PTCD3Q96EY7 689 aaKnown RBP4.63□□□□□ -1.67
CDH1-211ENST00000567320 ADI1Q9BV57 179 aa4.63□□□□□ -1.67
CDH1-211ENST00000567320 IFT122Q9HBG6 1241 aa4.63□□□□□ -1.67
CDH1-211ENST00000567320 LANCL2Q9NS86 450 aa4.63□□□□□ -1.67
CDH1-211ENST00000567320 TMEM140Q9NV12 185 aa4.63□□□□□ -1.67
CDH1-211ENST00000567320 DMTF1Q9Y222 760 aa4.63□□□□□ -1.67
CDH1-211ENST00000567320 MAST3O60307 1309 aa4.63□□□□□ -1.67
CDH1-211ENST00000567320 MTHFD2P13995 350 aa4.62□□□□□ -1.67
CDH1-211ENST00000567320 FGFR4P22455 802 aa4.62□□□□□ -1.67
CDH1-211ENST00000567320 ATXN1P54253 815 aaKnown RBP4.62□□□□□ -1.67
CDH1-211ENST00000567320 MRPS9P82933 396 aaKnown RBP4.62□□□□□ -1.67
CDH1-211ENST00000567320 OCA2Q04671 838 aa4.62□□□□□ -1.67
CDH1-211ENST00000567320 UBXN2BQ14CS0 331 aa4.62□□□□□ -1.67
CDH1-211ENST00000567320 ADRM1Q16186 407 aa4.62□□□□□ -1.67
CDH1-211ENST00000567320 TOR2AQ5JU69 321 aa4.62□□□□□ -1.67
CDH1-211ENST00000567320 GJC2Q5T442 439 aaPredicted RBP4.62□□□□□ -1.67
CDH1-211ENST00000567320 UBE3BQ7Z3V4 1068 aa4.62□□□□□ -1.67
CDH1-211ENST00000567320 KIAA0907Q7Z7F0 614 aaPredicted RBP4.62□□□□□ -1.67
CDH1-211ENST00000567320 FAM43AQ8N2R8 423 aa4.62□□□□□ -1.67
CDH1-211ENST00000567320 TSPEARQ8WU66 669 aa4.62□□□□□ -1.67
CDH1-211ENST00000567320 AIFM2Q9BRQ8 373 aa4.62□□□□□ -1.67
CDH1-211ENST00000567320 LRFN3Q9BTN0 628 aa4.62□□□□□ -1.67
CDH1-211ENST00000567320 GREM2Q9H772 168 aa4.62□□□□□ -1.67
CDH1-211ENST00000567320 DMRT3Q9NQL9 472 aa4.62□□□□□ -1.67
CDH1-211ENST00000567320 RBM12Q9NTZ6 932 aaKnown RBP4.62□□□□□ -1.67
CDH1-211ENST00000567320 USP25Q9UHP3 1055 aa4.62□□□□□ -1.67
CDH1-211ENST00000567320 AJAP1Q9UKB5 411 aaPredicted RBP4.62□□□□□ -1.67
CDH1-211ENST00000567320 APOBEC2Q9Y235 224 aaKnown RBP4.62□□□□□ -1.67
CDH1-211ENST00000567320 SALL3Q9BXA9 1300 aa4.62□□□□□ -1.67
CDH1-211ENST00000567320 IGLV2-14P01704 120 aa4.61□□□□□ -1.67
CDH1-211ENST00000567320 SLC6A2P23975 617 aa4.61□□□□□ -1.67
CDH1-211ENST00000567320 SREBF1P36956 1147 aa4.61□□□□□ -1.67
CDH1-211ENST00000567320 ALDH1A3P47895 512 aa4.61□□□□□ -1.67
CDH1-211ENST00000567320 SIM1P81133 766 aaPredicted RBP4.61□□□□□ -1.67
CDH1-211ENST00000567320 HNRNPA0Q13151 305 aaKnown RBP4.61□□□□□ -1.67
CDH1-211ENST00000567320 ZNF169Q14929 603 aaPredicted RBP4.61□□□□□ -1.67
CDH1-211ENST00000567320 CT47A1Q5JQC4 288 aaPredicted RBP4.61□□□□□ -1.67
CDH1-211ENST00000567320 COLEC12Q5KU26 742 aa4.61□□□□□ -1.67
CDH1-211ENST00000567320 AKNAD1Q5T1N1 836 aa4.61□□□□□ -1.67
CDH1-211ENST00000567320 CMIPQ8IY22 773 aa4.61□□□□□ -1.67
CDH1-211ENST00000567320 ACTRT2Q8TDY3 377 aa4.61□□□□□ -1.67
CDH1-211ENST00000567320 NAF1Q96HR8 494 aaKnown RBP4.61□□□□□ -1.67
CDH1-211ENST00000567320 HEPHQ9BQS7 1158 aa4.61□□□□□ -1.67
CDH1-211ENST00000567320 RUVBL1Q9Y265 456 aaKnown RBP4.61□□□□□ -1.67
CDH1-211ENST00000567320 WNT10BO00744 389 aa4.6□□□□□ -1.67
CDH1-211ENST00000567320 GSPT1P15170 499 aaKnown RBP4.6□□□□□ -1.67
CDH1-211ENST00000567320 GYS2P54840 703 aa4.6□□□□□ -1.67
CDH1-211ENST00000567320 SCAPQ12770 1279 aa4.6□□□□□ -1.67
CDH1-211ENST00000567320 MUM1Q2TAK8 710 aa4.6□□□□□ -1.67
CDH1-211ENST00000567320 COLGALT2Q8IYK4 626 aa4.6□□□□□ -1.67
CDH1-211ENST00000567320 CCHCR1Q8TD31 782 aa4.6□□□□□ -1.67
CDH1-211ENST00000567320 BOD1Q96IK1 185 aa4.6□□□□□ -1.67
CDH1-211ENST00000567320 SLKQ9H2G2 1235 aaPredicted RBP4.6□□□□□ -1.67
CDH1-211ENST00000567320 FBXO34Q9NWN3 711 aa4.6□□□□□ -1.67
CDH1-211ENST00000567320 KCNE5Q9UJ90 142 aa4.6□□□□□ -1.67
CDH1-211ENST00000567320 DNM3Q9UQ16 869 aa4.6□□□□□ -1.67
CDH1-211ENST00000567320 ACTL7AQ9Y615 435 aa4.6□□□□□ -1.67
CDH1-211ENST00000567320 ATRNL1Q5VV63 1379 aa4.6□□□□□ -1.67
CDH1-211ENST00000567320 COL11A2P13942 1736 aaPredicted RBP4.6□□□□□ -1.67
CDH1-211ENST00000567320 TEX33O43247 280 aa4.59□□□□□ -1.67
CDH1-211ENST00000567320 ENDOD1O94919 500 aa4.59□□□□□ -1.67
CDH1-211ENST00000567320 PRSS23O95084 383 aa4.59□□□□□ -1.67
CDH1-211ENST00000567320 CKBP12277 381 aa4.59□□□□□ -1.67
CDH1-211ENST00000567320 ALAS1P13196 640 aa4.59□□□□□ -1.67
CDH1-211ENST00000567320 RARRES1P49788 294 aa4.59□□□□□ -1.67
CDH1-211ENST00000567320 SRSF2Q01130 221 aaKnown RBP4.59□□□□□ -1.67
CDH1-211ENST00000567320 CREMQ03060 361 aa4.59□□□□□ -1.67
CDH1-211ENST00000567320 STRA8Q7Z7C7 330 aa4.59□□□□□ -1.67
CDH1-211ENST00000567320 THNSL2Q86YJ6 484 aa4.59□□□□□ -1.67
CDH1-211ENST00000567320 MARS2Q96GW9 593 aaKnown RBP4.59□□□□□ -1.67
CDH1-211ENST00000567320 MYOCQ99972 504 aa4.59□□□□□ -1.67
CDH1-211ENST00000567320 DNAJC28Q9NX36 388 aa4.59□□□□□ -1.67
CDH1-211ENST00000567320 SIK3Q9Y2K2 1263 aa4.59□□□□□ -1.67
CDH1-211ENST00000567320 TRGV11A0A075B6L2 103 aa4.58□□□□□ -1.68
CDH1-211ENST00000567320 KIAA0391O15091 583 aaKnown RBP4.58□□□□□ -1.68
CDH1-211ENST00000567320 PEX1O43933 1283 aa4.58□□□□□ -1.68
CDH1-211ENST00000567320 FPR1P21462 350 aa4.58□□□□□ -1.68
CDH1-211ENST00000567320 GCSHP23434 173 aa4.58□□□□□ -1.68
CDH1-211ENST00000567320 TMPRSS15P98073 1019 aa4.58□□□□□ -1.68
CDH1-211ENST00000567320 CYP2A13Q16696 494 aa4.58□□□□□ -1.68
CDH1-211ENST00000567320 EPHA10Q5JZY3 1008 aa4.58□□□□□ -1.68
CDH1-211ENST00000567320 ZNF362Q5T0B9 420 aaPredicted RBP4.58□□□□□ -1.68
CDH1-211ENST00000567320 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP4.58□□□□□ -1.68
CDH1-211ENST00000567320 FITM2Q8N6M3 262 aa4.58□□□□□ -1.68
CDH1-211ENST00000567320 LMBR1Q8WVP7 490 aa4.58□□□□□ -1.68
CDH1-211ENST00000567320 NACC2Q96BF6 587 aa4.58□□□□□ -1.68
CDH1-211ENST00000567320 GSTO2Q9H4Y5 243 aa4.58□□□□□ -1.68
CDH1-211ENST00000567320 PCDHGA2Q9Y5H1 932 aa4.58□□□□□ -1.68
CDH1-211ENST00000567320 TCRBV7S2A1N4TA0A589 114 aa4.57□□□□□ -1.68
CDH1-211ENST00000567320 CCDC78A2IDD5 438 aa4.57□□□□□ -1.68
CDH1-211ENST00000567320 CDHR4A6H8M9 788 aa4.57□□□□□ -1.68
CDH1-211ENST00000567320 MYADML2A6NDP7 307 aa4.57□□□□□ -1.68
CDH1-211ENST00000567320 MGST3O14880 152 aa4.57□□□□□ -1.68
CDH1-211ENST00000567320 ORC4O43929 436 aa4.57□□□□□ -1.68
CDH1-211ENST00000567320 BRINP1O60477 761 aa4.57□□□□□ -1.68
CDH1-211ENST00000567320 GPR32O75388 356 aa4.57□□□□□ -1.68
CDH1-211ENST00000567320 OSMP13725 252 aa4.57□□□□□ -1.68
CDH1-211ENST00000567320 GUCY1A2P33402 732 aa4.57□□□□□ -1.68
CDH1-211ENST00000567320 SOX5P35711 763 aa4.57□□□□□ -1.68
Retrieved 100 of 20,778 RNA–protein pairs in 37.6 ms